Basic Information

Insect: Papilio bianor
Gene Symbol: Hr39
Assembly: None
Location: HiC:14721416-14739075[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2 1.5e+04 -6.4 7.6 100 161 327 365 198 408 0.64

2 4 6.5e-08 0.0005 19.4 0.1 1 20 490 509 490 517 0.91

3 4 0.03 2.3e+02 0.7 0.0 77 115 535 572 511 583 0.77

4 4 2.7e-63 2.1e-59 201.8 0.0 205 408 607 811 588 811 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2	1.5e+04	-6.4	7.6	100	161	327	365	198	408	0.64
2	4	6.5e-08	0.0005	19.4	0.1	1	20	490	509	490	517	0.91
3	4	0.03	2.3e+02	0.7	0.0	77	115	535	572	511	583	0.77
4	4	2.7e-63	2.1e-59	201.8	0.0	205	408	607	811	588	811	0.94

Sequence Information

Coding Sequence: ATGACGTTTATGAACATTATCGGCATCGAGTCTCGTTACTGTAAACAAAGTGCCAATGACACGGGGGTCGTCGTATCGATAGTGTGGCACAACACTGGCTGGCAAGGCCGCGAGGAGGTGACACAATTATTACGAACTGTCGATAGTAATGGTTATATTAGTGTAGTGAGTGCAAAGAATACGACGATGTCGAGCGATGCTGACTCTGTGAAGGTGGAGGGGGGCCATGTGTCCGTCACCACTATCAGTATGTCAGGCCCCGAGACCAGCGATGGTCAGTTCTCGTACAGTTCCAGTGGAGTGCGTATCAGTGTGTCTTCGGATCCTCACGACGAAGACTCGACTGATGCGGAGATCTCCAAGATTGATTTCACGCAACATCAATATGAGGTCAACATGCGGAATAAGAAGAAGCGGTCTTCCAGCGGCGCCGGCGCACAATGCGAGGGCAGCGAGCGGGAGCGGCCCATGTCGTGGGAGGGAGAGCTGTCTGACTCCGAAATGGTCATAGACACCGTCCACAATGATGAGAACAGCAGTTCAATAGACATGCAGTCATCGCGTGATTCTATTGACACGCTTCGGAATGTAAGCATCAAAGCTGAACCCCTCAAAACAGAAGCATTTCAGAGCTTCGACGATCAGCGCGTGTTAGACTTGAAGTACGCAGCACCATTGCAGCCTCATCAGCGCAGTCTTAGTATGAATAGGATATCAGTACTAACTGACAGCGCCTCGCTGTGCTTGGCGCGCCGGCCGTCGTCCCCCACTCACAGCGCCAAGTCCCTGCTGCTGACCGAGCAGACCGCGCTTCCGTTAATCACGCCTGTCGGAGAAGCACAGAACCTCACCATAAAGAAGGAGACTCAGCTATCAGAGTTGAAATGTGAGGGTGGATGTGGCATGGAGAAGCTGGTGGGGCTACACGGGTCACCGCTGCTGGGACGGTTGCCGCGCGTGCAGTCCAGCGCCAGCACCGACTCCGCCGTGCACTCCATGTATACACACAGTGTATACAGCAGTCCGTCGGCAAGCCCGCGTCCAGCGCGGCACTACACCCCGTCATTGTCGCGTAATAACAGCGACGCTTCACACTCCTCTTGTTACTCCTATAGCTCGGAGTTCTCTCCTACGCACTCGCCAGTACAGCAGAGCCGGCAGCCGCACGTGGTGTACCGCGAGCACGAAGACGAGGATGCGGCAGACGACCGCCTGCACCACCACCAGGGCATCAGCAGGCAACAGCTCATAAACAGTCCGTGTCCCATCTGCGGCGACAAGATCAGCGGGTTCCACTACGGCATCTTCTCTTGTGAGTCATGCAAGGGGTTCTTCAAGCGCACTGTACAGAACCGTAAGAACTACATGTGTCTCCGCGGCGGCAGCTGCCCTGTTACTGTCGCCACGCGGAAGAAGTGCCCCGCCTGCCGCTTCGACAAGTGCCTCGGCTGCGGCATGAAGCTCGAAGCGATTCGCGAGGATCGTACTCGCGGCGGTCGCTCGACATACCAGTGCTCGTACTCACTGTCGGGCGCAGCGTCCACTGGCTCGCTGCTCTCTGCGCACGCGCCGCCCACCATGCGACATGCCAGCAGCCTCAACATCGTAAACGGTCCTGGGTCTTACAATCGAGGGGAAGCAAGTAACAGTCGCTTGACGCCAGAAATTCCTACATTATTACAGGAGATAATGGATGTAGAGCATCTGTGGCAGTACAATGAGTCTGAATTAAGCCGGCTTGGGAAGTCTGGTAGTGGGGTGGGGGCGGGGGTAGGAGCCAACCCCCTGCTGGCTGCTAGCGGCATCACGCCGCACACCTCCAGCGCGGACATTTTAGCAGATCTCTGCCACATTGCTGACCACCGCCTCTACAAGATCGTTAAATGGTGCAAGAGTTTGCCGCTATTTAAGAATATATCGATCGACGACCAGATCTGCCTGCTGATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTACCGCGGCGTGGGCACGCCCGGGGAGGTGCGCGTCGGCGGCGGACGCGGCCTCACGCTGCACCAGAGTGCCAAGTTTGGGCTAACGCCTTGCATAGAGCGCATGCTGAGCTTCACCGACCACTTGCGGAGGCTGCGGGTCGACCGCTACGAGTACGTCGCACTCAAAGTCATCGTACTCCTCACTTCAGATGCACCTGAATTACGCGAGGCGGAGAAAGTACGAGCGTCACAGGAGAAGGCGCTGGCGGCGCTGCAGGCGTACACAGCCGCGCACTCACCTGACGCACCCGCAAAGTTCGGCGAGCTACTACTGCGTATACCCGAGCTGCAGCGAACCTGCCAGTTCTTCATGCAAGTGGGCAAAGAAATGCTGAATCCCGCCAACAAGAGCAAAGATGGCGACGGTCCCAGCTTCAACCTGCTAATGGAACTGCTCCGGGGAGATCATTGA
Protein Sequence: MTFMNIIGIESRYCKQSANDTGVVVSIVWHNTGWQGREEVTQLLRTVDSNGYISVVSAKNTTMSSDADSVKVEGGHVSVTTISMSGPETSDGQFSYSSSGVRISVSSDPHDEDSTDAEISKIDFTQHQYEVNMRNKKKRSSSGAGAQCEGSERERPMSWEGELSDSEMVIDTVHNDENSSSIDMQSSRDSIDTLRNVSIKAEPLKTEAFQSFDDQRVLDLKYAAPLQPHQRSLSMNRISVLTDSASLCLARRPSSPTHSAKSLLLTEQTALPLITPVGEAQNLTIKKETQLSELKCEGGCGMEKLVGLHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRPARHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQQSRQPHVVYREHEDEDAADDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGSCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLSAHAPPTMRHASSLNIVNGPGSYNRGEASNSRLTPEIPTLLQEIMDVEHLWQYNESELSRLGKSGSGVGAGVGANPLLAASGITPHTSSADILADLCHIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVGTPGEVRVGGGRGLTLHQSAKFGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTAAHSPDAPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00958006;
90% Identity: iTF_01139641;
80% Identity: iTF_01139021;