Prud038897.1
Basic Information
- Insect
- Panzeria rudis
- Gene Symbol
- GATAD1
- Assembly
- GCA_956483635.1
- Location
- OY101450.1:138710509-138711474[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-08 0.00018 22.5 1.1 1 26 9 32 9 34 0.95
Sequence Information
- Coding Sequence
- atgccTCCAAAATCCTCACCGGTGTGTGTCGAATGTAAAAAAACAGAATCTTTATTATGGCGATCTGTGGAAAATGGTCAATTGTGTCAAGCTTGCTTTCAAATTCGAGAAGCCAAAGACACCAAGTCGCAAGATGTAGTTGAAGACAAGAAATCGAAGAGTAGCAAAGACAAGGACGCCAAAGAAGACGCTAAAAGTGATAATAAAAAGGAAACCAGCAGCACATTGTCAGAAGAACGTGGAACACGTTTGAGAAAAAGTACTAGAGCAACACGCTTCAAGACTAAATCAAGTGTAAATCCGAGCAGCAATACAAATGGGAATGGTGAAAAACAAACGGGAAGTGGCAGTGGAAAACCGCAAACAAAAGGACGCAATAGAAGAAGCTTATTTAAGAGGTTGCCTTTTAAAACACCTTTGGCGCAAGCCACTACTCATACAGTGGAGAGTATTTTTCATAAGggTTCATATGTGCAAATTGGTGATATCGTGTCCCTGATAGATAGTGAGGACAATGTGTATTATGCCCAAATAAGAGGTTTGTTAATTGACAACTATTGTGAAAAGTCTGCATTTTTGACTTGGCTTATACCAACACAAGAAAGTCCTGATCCCAAAGATGGATTCGATGCAGCTACTTATTTAATAGgACCCGATGAGGAATTCTCTCGCAAATTATCCTGCTTAGAGTTTGTTATGCATGCGCCAAGTAATTATTATATGGATCGAACAACGCCCTACCCACTGCCTGACAGTATGGAATATGATACGAAACCTGGTGGTTTTATATGGACTACACTGCCCGAATACCATAGAAATAAAACAGTTGTAGAGatataa
- Protein Sequence
- MPPKSSPVCVECKKTESLLWRSVENGQLCQACFQIREAKDTKSQDVVEDKKSKSSKDKDAKEDAKSDNKKETSSTLSEERGTRLRKSTRATRFKTKSSVNPSSNTNGNGEKQTGSGSGKPQTKGRNRRSLFKRLPFKTPLAQATTHTVESIFHKGSYVQIGDIVSLIDSEDNVYYAQIRGLLIDNYCEKSAFLTWLIPTQESPDPKDGFDAATYLIGPDEEFSRKLSCLEFVMHAPSNYYMDRTTPYPLPDSMEYDTKPGGFIWTTLPEYHRNKTVVEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00922583;
- 90% Identity
- -
- 80% Identity
- -