Lser007249.1
Basic Information
- Insect
- Lucilia sericata
- Gene Symbol
- GATAD1
- Assembly
- GCA_015586225.1
- Location
- NW:17445-19560[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.1e-08 0.00014 21.0 0.4 1 26 9 32 9 36 0.95
Sequence Information
- Coding Sequence
- atgCCTCCAAAAGCTACACCAACTTGTATAGAGTGTAAAAAAACAGAATCCTTGCTGTGGCGTTCAGTGGAAAATGGTCAAATATGTCAGGCCTGCTTTGAACTACAAGAAGCTAAGGATGGTGAAAATGTTAAATCCCAGGAAGTCACTGAGGATAAGAAAACAAAGGGTAACAAAGATAAAGACACCAAAGAAGAGGTGAAAAcagataaaaaagaaatcaccaGCACCTTAGCGGAGGAACGGGGAGCACGCTTGAGAAAAAGTACCAGAGCTACACGCTTTAAGACGAAAATAAGTGCCAATCATGGTAACACAACAAATGGGAATGGAGAGAAAACGACCACAAGCAGCAGtggaaaacaacaaacaaaaggaCGTAATCGAAGAAGTTTATTCAAGAGGATACCCTTTAAGACGCCATTAGCACAGGCCACTACCCACTCAGTGGAGAGTATATTTCATaagGGTTCATATTTACAAGTGGGTGATATAGTGTCATTAGTGGATAACGAGGATAATGTGTATTATGCCCAAATAAGAGGTTTGTTAATAGATAACTATTGCGAAAAGTCGGCGTTTCTTACTTGGCTCATACCCACTCAAGAAAGTCCCGATCCCAAGGAAGGTTTTGATGCTGCTACATATTTAATAGGACCTGACGAAGAATTGTCTCGTAAATTATCCTGCTTGGAATTTGTTATGCATGCTCCTAGCAACTATTATTTGGACCGCTCTACCCCCTATCCACTGCCAGATAGTATGGAATATGACACCAAACCAGGTGGCTATATATGGACTACCCTACCGGAATATCATAGAAATAAAACAGCAGTGGAGGCgtaa
- Protein Sequence
- MPPKATPTCIECKKTESLLWRSVENGQICQACFELQEAKDGENVKSQEVTEDKKTKGNKDKDTKEEVKTDKKEITSTLAEERGARLRKSTRATRFKTKISANHGNTTNGNGEKTTTSSSGKQQTKGRNRRSLFKRIPFKTPLAQATTHSVESIFHKGSYLQVGDIVSLVDNEDNVYYAQIRGLLIDNYCEKSAFLTWLIPTQESPDPKEGFDAATYLIGPDEELSRKLSCLEFVMHAPSNYYLDRSTPYPLPDSMEYDTKPGGYIWTTLPEYHRNKTAVEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00921767; iTF_01259748; iTF_01377136; iTF_01174742; iTF_01138633; iTF_00760662; iTF_00045802; iTF_00259442; iTF_01427958; iTF_01399133; iTF_01075043; iTF_01398099;
- 90% Identity
- iTF_00921767;
- 80% Identity
- -