Basic Information

Insect: Panzeria rudis
Gene Symbol: L
Assembly: GCA_956483635.1
Location: OY101450.1:39964629-39993686[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1e-05 0.0011 20.7 1.7 1 23 217 239 217 239 0.98

2 19 0.81 92 5.3 5.7 1 23 245 267 245 267 0.98

3 19 4.4e-07 5e-05 25.0 3.1 1 23 273 295 273 295 0.99

4 19 2e-05 0.0023 19.7 0.3 1 23 301 323 301 323 0.98

5 19 6.4 7.2e+02 2.4 0.8 2 23 388 411 387 411 0.84

6 19 0.004 0.46 12.5 0.2 2 23 438 460 437 460 0.96

7 19 0.053 6 9.0 0.7 1 23 561 583 561 583 0.97

8 19 0.59 66 5.7 2.0 2 23 591 612 590 612 0.95

9 19 0.00058 0.066 15.2 0.8 1 23 620 643 620 644 0.93

10 19 0.42 47 6.2 0.1 1 19 649 667 649 669 0.93

11 19 7.5 8.5e+02 2.2 0.6 3 23 681 702 679 702 0.84

12 19 0.0026 0.3 13.1 2.9 1 23 741 763 741 764 0.96

13 19 5.7 6.5e+02 2.6 0.9 1 23 949 973 949 973 0.89

14 19 0.0015 0.17 13.8 4.8 2 23 982 1004 981 1004 0.97

15 19 0.22 25 7.0 0.1 1 23 1010 1032 1010 1032 0.92

16 19 0.033 3.7 9.7 0.6 2 23 1040 1061 1040 1061 0.96

17 19 1.4 1.6e+02 4.5 0.5 2 23 1151 1172 1151 1172 0.94

18 19 0.0011 0.13 14.2 0.1 1 23 1182 1204 1182 1204 0.97

19 19 0.019 2.1 10.4 0.7 1 23 1211 1233 1211 1233 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1e-05	0.0011	20.7	1.7	1	23	217	239	217	239	0.98
2	19	0.81	92	5.3	5.7	1	23	245	267	245	267	0.98
3	19	4.4e-07	5e-05	25.0	3.1	1	23	273	295	273	295	0.99
4	19	2e-05	0.0023	19.7	0.3	1	23	301	323	301	323	0.98
5	19	6.4	7.2e+02	2.4	0.8	2	23	388	411	387	411	0.84
6	19	0.004	0.46	12.5	0.2	2	23	438	460	437	460	0.96
7	19	0.053	6	9.0	0.7	1	23	561	583	561	583	0.97
8	19	0.59	66	5.7	2.0	2	23	591	612	590	612	0.95
9	19	0.00058	0.066	15.2	0.8	1	23	620	643	620	644	0.93
10	19	0.42	47	6.2	0.1	1	19	649	667	649	669	0.93
11	19	7.5	8.5e+02	2.2	0.6	3	23	681	702	679	702	0.84
12	19	0.0026	0.3	13.1	2.9	1	23	741	763	741	764	0.96
13	19	5.7	6.5e+02	2.6	0.9	1	23	949	973	949	973	0.89
14	19	0.0015	0.17	13.8	4.8	2	23	982	1004	981	1004	0.97
15	19	0.22	25	7.0	0.1	1	23	1010	1032	1010	1032	0.92
16	19	0.033	3.7	9.7	0.6	2	23	1040	1061	1040	1061	0.96
17	19	1.4	1.6e+02	4.5	0.5	2	23	1151	1172	1151	1172	0.94
18	19	0.0011	0.13	14.2	0.1	1	23	1182	1204	1182	1204	0.97
19	19	0.019	2.1	10.4	0.7	1	23	1211	1233	1211	1233	0.95

Sequence Information

Coding Sequence: atgTACTCAACGCATACTTCGTCAAGTTATTCACCTTCAATATCAGATGGTACAATTACACCAAATTCCttacatcatcatcatcatcaccaccATCAGCATTTAGCTGTACCACCACATTTGTCATTCCCCAATTCGGCTGCTTATGACGAAGACACATCTTTGGTCCTACAGACACAACGTCTGCAAAGGCAAAAAACTAATGGCACTTTGGATGGCGCTGACTATGAAGACAACGCCAATGACAATGACAACGACCGCAACAACGAAAGGATTCACAAAAATGATACAAAATTGTGTGAAGACAATGCCACAATTGTTGCAGATAATAAGACAACCACAAATATTTCTGAAAGTGGCGAAGAAcatcaacagcagcagcaagCACAGCATCAGCAGCATAATCATCAGCATCAACTCAAACGTCATGGTCGTCATCATCGTTATGCTGAACATGCCTTAAGAATGCCATCAAAATTACGCAAAATCGATAGGGATTCAATGGTTGGTAATGGTGCCAGTACCGTCGGTGTTGCTGCTGCTGGTGATGGTGTCGGTGTTGGTGTAACAGCAAATGCAGTCAAGTTTGATAAGTTGACAGGAGATGGCATTAAAAGTGGTACTAATGTTGCTAGTGCCGACGGATCCTATCAATGTCAGTTCTGTGATAAATCATTTCCGCGTCTTGGTTATTTGAAAAAACATGAACAGAGTCATGCTGAGCATCTGCCTTTCAAATGTGAATATTGTGCTCGCCTGTTTAAGCACAAGCGTTCCCGTGATCGGCATACTAAATTGCACACAGGCGATCGTCGCTATCGCTGTCCTCACTGCGAGGCGGCATTCTCAAGaagTGATCACTTGAAGATCCATATGAAAACCCATGATAACCAAAAACCGTTTCAATGTACCATTTGTAATCGCGGCTACAATACTGCTGCAGCTCTTACATCTCACatgcaaaatcacaaaaagcaaGCAGCTCTTCTTGCTGCTGGTGGCAATCCTCAAGCCATCAATTATAGCCCACGATCTACCGGTTCGGCTTCTAGCAATGGCAGTTTGCAAAAAAGACGTTATGGTCTAGCTGGAGCTACAGAACAAAGTCCCAATCGTATTGATTATCCAAAGCGAGGTCGTTCATCATCATCAAATATGCTTAAATGCACATTTTGTTCAAAGTCTGATTTTACTGCTGTGGAACAACTGAATACTCATCTTCAAACGCAACATGAAAAAGAACTAGCACATTCTATGACACCACCATCAACAAATCACCATCAACCCGTAGAAAATCATACATTCCAACTATCATGTGAATATTGTACTATGAAATTTCCTAATATCGCTGCCATGTTTCAACATATGCGCTCAGCCCATTTGGATCGTTTGACCAGTCCCAATTCATACTTTGAACATTTCAACCGTTTAGCTGCCTCAGGTACTTTTAGTCCCCGCTTATTAACTGGACCACCCTTAAGAAGTACTGCCAATGCAGAAGAAAACACTATCAAGGAAGAAAACAATTTATCGAGTCCTAAATCGGTAGAAGCTGCGAATCGACCAAGTGAAGATGAACCTACAGATCTGAGTCAAAACAATCGTAGATCAATGACACCCACACATACGCCTCAAAATTCACCGCAAGAACATTTGGCAGCCACCGAAAAACcaggtttatttttttgtaatcaaTGCAATGCTGGCTTGCCCGACTTTGAGTCATTTCGCAATCATTTGAAGACCCATATTTCTCAGGGCCTTAACTTGGTATGCCATCATTGCGGTTTGCTATTAAGAGAGCATGCGGAATATGAAAGACATGTTATATCTCACTTTCTTATAACAAATTCTGAGTACAATTGTTCGGGAAATTGCCAAAAGTCGTTTCCAAAGCCCGAGGAATTGCAAAAACATTTGGTGGATCATCACGCTATAACAATGTTTAAATGTGGGCTGTGTAGTGAAATGTTTGAATCGAAAGTAGCCATACAAGTGCATTTTGCTTGTACGCACTCGGCGGAAACTAAAATTCTTAGATGTTCGGCCTGTATGGATGTCTTTAGAACAGAAAACGATTTCAATTTGCATGTTAAAACACGCCATCAAGCTGTTAATAACAATCCGGCTCCAGTTAACTCTCTGCAGTGCATGTTTTGTCGTACAATTTGTTCCTCTGACCTGGAGATGCAATTCCATTTGGCTGCTCATGCCAGGCAATTTCGTTGTCCATCTTGCCCAGAAACTTTCCATGTTGAATTTTTACTTGATCGTCATATGCAAACACATCATGGTGGTTTGGATCGCCCAGCGCCTCCACCACCACTTCCGCCACCACAGCCAACTGTAGCAGAAGAACACACATCTCCTATTCCTAATCCAAATGCTATATCACCCATGAACTCTTTGTATGTCAATGCTTTATTTGGCAAATCACCATTAATGCCGCTGGCGCcacaaaataataacaatagtaTTTTAGATTATAACATGGCCTTTGCCTCACATCTTAATAAGGGTCTCTTTCCAAATACCACAcccaacaaattttacaatccTTTGCAAATTGACACGAATGCTATGAAACACTCAGCACTGATGTACGGTTTATCACAAAGATATTTCGATACGAATCGCACAGTCATGGAAAtgtaccaacaacaacaacaacaacagcagcagcaacaacatcaacaacatcaacaacaacaacaacttcaCCATCAGGATAACAGTAAAACGACAGGAAATTATTTTCTAAGTCCCAAACAACCACCAACTAGTGGTTCTCATGATGTTCATCATGTTAGAGATTTGCCCACCTCCCCAATAAATAATACCGGCTTTAGTTGTGGCATTTGTGAACGAAATGATTTTCGTACTGAATCGGAAGTCCACTCTCATCGCAAGATTGTACACAATCTTAAAACGGGAGTCAGCTTAAAGTGTGCCTATTGTTCGGGCAATTTTAAGTCGCGCAGTGAGCTGGAACATCATATGAAAACCTGTCATAATTCTACTGGCAAGCATAAGTGTTTGATATGTGACGAAATCTTTCCTTCACCTGCTATACTGGCCGAACACAAACTACAGCATTCCAAGGTGGGGCAATCGGGTAGATGTTCCCACTGCTCTAAAGCATTAGCCGATGTTAGTGCCTTTAAAGCCCATTTATCTGAACACAATACAGAAGGTCAAATGCCAGTGCAATGCATATGTTGTCGTCAGTCATTACATTCAGAATTTGAGATTGGTCTACATGCAAAattCCATGTTATAAACTCCAATGTACAGGAACATGTTTGTGCTCTTTGCTTGGAGCCAATAACCAATGCACCCACAGAAGCAAaagtttgtgaaaaatgttgtcGCAAACATAATCTTAATGCCAAATTCAAGCAACGTGAACTTTTCGAACGGCCTGCCGAACTGAGGCAGTACATTGAAAATCGTTGCAATCTTTGTAAAATGATTCTACCACATGCTCAGAAACTACAAGAACACCTGGTTGAGCATACCTTTGCCGGTTGTGAGGATCGCGGTTTCAACTGCTACATTTGTTCGGCAGTTTTTACTGTACCCAGTGGTCTTCTAAATCACATGCTAGAACATGGTACCAACTCTAAGCCCTACGATTGTAATTTATGTCCCGAAAAGTTCTACTTCCGAGCTGAATTGGACCATCATCTAATCGATCATGATGTAAGAGAATCGCCAACGGCCATAAAAAACGAGCAGGAGCTTGCGGCCAAGAAAGAAGAAACTTTGAATAACATGAAAACGCAGAAACCCGTCGGAGGTTTAAATGAAGTAAAACAAGAAGTTATGGAAAATGATCATCCATCCAACAATGTTGAAGAAGATGAGTACATTGAAGTGGAGAAGGTAAATGagagcaacaacaacattaataaCAATCACATGGATGCTGCAGTGTCGGATAAAATAGTAGACGCTAATGAGGAGTCTAATGAACATATGAGAGATGAAAAGGCATAA
Protein Sequence: MYSTHTSSSYSPSISDGTITPNSLHHHHHHHHQHLAVPPHLSFPNSAAYDEDTSLVLQTQRLQRQKTNGTLDGADYEDNANDNDNDRNNERIHKNDTKLCEDNATIVADNKTTTNISESGEEHQQQQQAQHQQHNHQHQLKRHGRHHRYAEHALRMPSKLRKIDRDSMVGNGASTVGVAAAGDGVGVGVTANAVKFDKLTGDGIKSGTNVASADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPQAINYSPRSTGSASSNGSLQKRRYGLAGATEQSPNRIDYPKRGRSSSSNMLKCTFCSKSDFTAVEQLNTHLQTQHEKELAHSMTPPSTNHHQPVENHTFQLSCEYCTMKFPNIAAMFQHMRSAHLDRLTSPNSYFEHFNRLAASGTFSPRLLTGPPLRSTANAEENTIKEENNLSSPKSVEAANRPSEDEPTDLSQNNRRSMTPTHTPQNSPQEHLAATEKPGLFFCNQCNAGLPDFESFRNHLKTHISQGLNLVCHHCGLLLREHAEYERHVISHFLITNSEYNCSGNCQKSFPKPEELQKHLVDHHAITMFKCGLCSEMFESKVAIQVHFACTHSAETKILRCSACMDVFRTENDFNLHVKTRHQAVNNNPAPVNSLQCMFCRTICSSDLEMQFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHGGLDRPAPPPPLPPPQPTVAEEHTSPIPNPNAISPMNSLYVNALFGKSPLMPLAPQNNNNSILDYNMAFASHLNKGLFPNTTPNKFYNPLQIDTNAMKHSALMYGLSQRYFDTNRTVMEMYQQQQQQQQQQQHQQHQQQQQLHHQDNSKTTGNYFLSPKQPPTSGSHDVHHVRDLPTSPINNTGFSCGICERNDFRTESEVHSHRKIVHNLKTGVSLKCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGRCSHCSKALADVSAFKAHLSEHNTEGQMPVQCICCRQSLHSEFEIGLHAKFHVINSNVQEHVCALCLEPITNAPTEAKVCEKCCRKHNLNAKFKQRELFERPAELRQYIENRCNLCKMILPHAQKLQEHLVEHTFAGCEDRGFNCYICSAVFTVPSGLLNHMLEHGTNSKPYDCNLCPEKFYFRAELDHHLIDHDVRESPTAIKNEQELAAKKEETLNNMKTQKPVGGLNEVKQEVMENDHPSNNVEEDEYIEVEKVNESNNNINNNHMDAAVSDKIVDANEESNEHMRDEKA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01237143;
90% Identity: iTF_00900041;
80% Identity: -