Prud013004.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Panzeria rudis
Gene Symbol
RREB1
Assembly
GCA_956483635.1
Location
OY101448.1:41462248-41469768[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.034 3.9 9.6 1.7 1 21 235 255 235 257 0.95
2 14 0.00058 0.066 15.2 0.2 1 23 267 289 267 289 0.98
3 14 4.1e-05 0.0046 18.8 7.5 1 23 295 317 295 317 0.98
4 14 6.6 7.5e+02 2.4 0.1 1 20 539 559 539 563 0.66
5 14 7.1 8e+02 2.3 3.1 2 20 569 587 569 588 0.93
6 14 0.034 3.9 9.6 0.0 1 23 728 750 728 750 0.97
7 14 2e-05 0.0022 19.8 1.2 1 23 760 782 760 782 0.99
8 14 0.0014 0.16 13.9 2.0 1 23 788 811 788 811 0.97
9 14 0.0052 0.59 12.2 2.0 1 23 1166 1189 1166 1189 0.95
10 14 0.00031 0.036 16.0 1.0 3 23 1530 1550 1528 1550 0.97
11 14 0.25 29 6.9 6.3 1 23 1556 1579 1556 1579 0.97
12 14 7.5 8.5e+02 2.2 4.1 1 23 1680 1703 1680 1703 0.92
13 14 0.15 17 7.6 1.1 3 23 1757 1777 1756 1777 0.91
14 14 0.0017 0.2 13.7 5.7 1 23 1783 1805 1783 1805 0.99

Sequence Information

Coding Sequence
atgttagtcGCCACAAATCCCCAACAAACTGTCCAAAATAGTCCGAAAACAACTAGAGCTAATACGCCAATCAAAATGGAAAGAAGAGATTCCTCTTCCTCGTACTCGTCGTTGGAAGATTTGGAacaggaaagaaaaaaattgaatgCTGTTACATCAACACCGCTGGTGGCCAGTGAGCCTGTGAATGCTTGCAATTTAAgtgttaaaacaacaacaaaatcgaTTCAAAGAACAGATATAATTGATCAAGAACAAAACCTACATCAGCGTATGCAAGAGTCTGATGAGGCTAATGATTACGATGAGGACGAATCAGCTGATGAGAAATCATCTTCGCAGCCACGTGAACACTACAAACGTCGTCTCAGTGGACGCAGCCTAAGCGATAAGCCCACTAGCTATCTAGTAGATTACAATGCCAATAATCCCAATTCATTGCGCAAGAAATTTCGCTCTAACCGTTTTGTTCTAAACAACGGCGATGAGTCGGGTTTCGTTGATACTAGCAACAATAGCCAATTGAGAAataccacaacaacaacaacaacaacgtcATTGTCTTTAGCAGTTACAACAACAAATGAGTCCAATTCGaataataattcaaaatcaaatAGTTGTTCGGATTCATCATCGCCGCCCCAAAGCAATGGTAACTCTAGTCCAGAATCAGGTATAGGAGAACGCGAGGATATGAAATATATGTGCCCCATATGCGATGCAGTTTCACAAACGGCCCATCAATTTACAAATCATATACGTTGTCACAATTACGCTTCAGGACATACGGAAAACTTCACCTGTCGTATTTGCTCTAAGGTGCTCTCATCTGCCTCTTCATTGGATCGCCATGTTCTAGTACATACGGGAGAACGACcatttaattgtaaatattgTCATCTTACATTTACCACAAACGGGAATATGCATCGTCATATGCGTACCCATAAGCAGCATCAACATACTCATCATAGACGCAACTCGAATGGAACAAAGTTCAACgcaaacaacaataataataataactacaACAATAGTAATaacgcaacaacaacaacaacgacaccagctacaaacaaaacaacaatattaaGCAATGGAGAATTAAATGAAGGCGttaaattatcaacaacaacaacagacaCAACGctaacagcagcaacaacagcaattaCTACACCGTCATCGCCAGCAGCAGCAGCGACAACAACCACAACAGTGAATACTTCTGACAATAATTATAGTCAAAAGGAAACAACAGGTGCTAATGTCGAACGTTTAAATGGTAACGCCAACTTAGAAAGTTATGAAAGTGATGGTGGCTGCTCATCAGACTCATCAGCAGGTCATGTCTACAGCAACAATAATAATGAcaagcaaaataataataacgattttcaaattaacaataacaactaTAAACGAAAGCATAGCGATGATGATCAGCCGCATCCAGATATACCGGATTCTAAAGAAAGCAATCATGACCTCTTAAAGCGTCGTTTAAGACTTGACACTTCAAGATCACCTTCCGTTTCatataatagtaataataataataataataataataataatgatctGATAAACAATACAACCTTAAATTCTTCGTTCGTTTGTCCCATTTGCAATGAGAGCGATTTTGCCGATAGCCTGGCTCTTGATCAACACATTGATAACAAACATCCAAAAATTCCCGCCAAATGTAAACATTGTGGTGTCATCTATCTAACGCAACATCAGTTTAACATACATGTCTGTCCGGCCGATATCAAAGATTCTCTTAATTTATCGGTGAAAGAACGCCGTTTGAGTGAAAACTCTAAACAACATACGGAAGAAAATCATGAAGAAGCTGAAGATAATGTACGACAAAGACATGAactatttcaacattttaaaaatgtcatggCCCAAAGCCATTCACCTTCGTCGCATTTCAATCAAGATTTGACTGAAGATGACATTAAGTCCGAACCATCGGCTCATGATTCAAAAGATTTGGCTGATATTCAATCAATATTAAATATGACAGCTTCTTCTAGTAACTCAAATTTGCTAAGGAACTTTGAACAATCGGTGAATACTCCTTCTTCTCAATATAGCTATGATCGGGATGAGGAGGAGGCTCAAGATGCATTCACCTCGGAGTTCCGCAAAATGAAGTTGCGAGGTGAATTCCCCTGCAAGCTCTGCCCGGCTGTTTATCCAAACTTACGAGCTTTGAAAGGCCACAACAGGGTACATTTAAGTGAGGCTGGTCCAGCGGGTCCCTTCCGTTGCAATATGTGCCCTTACTCGATATGTGACAAAGCCGCCTTGATTCGTCATATGCGTACCCATAATGGCGATCGTCCGTATGAGTGTGCTGTGTGTAACTATGCCTTTACAACCAAAGCCAATTGTGAAAGACATTTGCGCAATCGCCATGCCAAAACTACTCGCGAGGAAGTTAAACGTGCCATTATATATCATCCGTCAGAAGACTCGTCCTGTGAGGATACTACCAAAAAGTTGCAAATGTTTTCAGCCGAGTTGGAGGAAGACTACGATTCTATGTCTTATCATCAACACCCGCCAAAAGATCGTTCAACTCCAGTATCGCATCTCAAGGAAAGATTGACTGCGGGTGATAGTCCTTCCTCAAAACCAGTTAAGATTCAGGTAAAAAACCTTGAAGATCTTTTGGATAAATCAACAGCTTCATCAGGCTATCATGATAGCTACGATCGGCGTAACATTGAAACTTCGCAGGTGCCTATTGACATGAGTATGGATGTTTTAGATTTGAGTAAAAAGCCTTGTGCTCCTCAGCCCCCAGTTCAGGAAGAAAAGGTAGAATCATCGATACCAATGCCTTCTTTACCAAAACCAAATGTCATTCAGCCCAGCAGTGAAGTTATAAAGAGCAAAATAGTTCCCACAGAAGTTGATCCAAAATTGGATATACCAGCGTTGGATAAACAGCATCAACAATTGCTTTTAGCTCAACAACAACTACTCAGTGATCCAAATCAGCTAATGCAGCAATTATATCGAAATCTATTGTTTCCTCAATTCCCGCCCTTCTTTATGCCCAACACTTTTATGAACAGCAATtttacagattttcaaaaacttgcTCCCATTCTAACTCGTATGATGGGTGGAGTAGCTGCAGCAGCTGCAGTGCCTAACAACGACATTGAAAAACCATCTACATTAACAACACCCATGAATACCATCACCTCCTCCAGCATGCCGTCCATGAGTCCACTAATACCGGAAAAATCTAACTCTGCACCATTGGATACAATGTCCTCCCCTAAAAGTTTACATTCACCAAATTCAAATCACTTGCCTATTCCAAGACATATAATGCCACCTACGGCATCATCGCACTCCCCAAATTTGCTGCCAACAATGCTTTCAAATGGTCCTGTCAAAATGGTGCTCAAAAATGGCGTGTTCATGcccaaacaaaaacaaagacgTTATCGAACTGAACGGCCGTTTGCCTGTGAGCATTGTTCGGCTCGTTTTACTTTACGCTCAAATATGGAACGCCATGTCAAACAACAACATCCGCAGTTTTATGCTCAACGCCAACGCAGTGGACATCATGTTATGCGCGGTAGAGGAGCATCTAGTGCtgctaatataaataatatctcTCATTTTCAAGCTGTAGCTCAAGCTCATTATAATTCTGCACCACCTTCTGTTAGCTCCCATTCACCCATTTCCGATCAGGTTAAATGTGCTATATTGGCACAACAACTTAAGGCTCGCAAAGATACTGATCTACTGCAACAAGCCTTAGCTCATGGCTCCAATAGCGTTGTAGCcaattcaaatatgttttctcAAACAGGACCAACGAATCTTATGAAtggacaaacaaatttttacgcTTTCAATCCGAATCATAGCCATCATTTAAGACAAAACGGTACCCCTAATGGATCCATGGAAGATGATGAACCCAAGCTTATAATCGATGAAGATGACgaggaagaagaagaagaagatgaAGAGGACATTGAAGAAATTCCAGATGATCATGAGGAAGATGAAGAAAATGAATTGGATTTGAGTCAGTGCAAAGATAAACTGGAAACACGTCATTTGCCAACAACTGTAGAAGAAGTTAAGCTCAAGTCGGATAAAGTGCCAGATTCGGCCAAGAAAGTCGCTGAGTCTATATTTGAACAAGCCATTAAAGCCAAGCAAACTATAAGCCCTTTTGCTAAAACTATAGAGTCTTCTTTGGTAACCTCTAACAATAACACAATGAAATCGATGATTGCTCAAGCTCCAGCAGTTGGTAAATTCTTAAAAGAAGTGGCAAGTTCTTCATTTAAAGATGAATCTCAAGATTTGGTTTCAGTCTCTGAACTAGTAGATAATGCCACTAACAATTCGGTGTCATTTAACAGCTATTTCCGACCATCTGATGTAGCCAATCACATGGAGCCCAGCGATGAAGATGGTTTAGTTGCATCCTCGGCCAGCGAAAGCAACAACTCAGGCGCGGAAGATACTGTGAGTACTGAGAAGCCTAAAAAGAAATCAGCATACAGTTTGGCGCCAAATAGAGTTCATTGTCCATATTGCCAACGTATGTTCCCATGGTCCAGTTCCCTGAGAAGACATATTCTTACCCATACTGGGCAAAAGCCATTTAAATGCTCTCACTGTCCTCTCTTGTTTACGACCAAAAGTAATTGTGATCGTCATCTTTTGCGAAAACATGGAGATGTAGAGTCTGCTGTATCTGTGTATGTACCAACTGAAGATGTTTCCGAACCTATTCCCTTGCCCAAGTCAGTCGAAGAAATAGAAAGAATGCAAAGAGAACGTGAGGAAGAAGAACGCAAACGCAAGGCCGAAGAACAAAGAGAACGTTTGGAAAAAGAACAAATAGAGAAGCAAAAATTGGAACaggaacaacaacaaaaacaagcaTTTCTAAAGCAATTAGCAGTCGCACAATTCCAACAACAATTCAACCAAAAACCAGAAGTTAATCCAATATCATCTTCAGAACTACCTTTTAAATGTCATCTGTGTGAAAACTCATTTTCTGAACGCTTACAATGTTTAGAACACATCAAATCGTTGCACACCCAAGAGTTTGCTTTATTGCTATCGAAAGGAGCTATTGAAAATGAAACGGACTCCGCTCAAATGACATCGAATGAGGAAGATGAACGCCAAAGATCTGCCGCCGAAGATTCAGCTAAAGGAGGAAAGTATCCGGACTATAGTAACCGTAAAGTTATTTGTGCTTTTTGCATGCGACGTTTCTGGTCGACTGAAGACCTTCGTAGGCATATGCGCACTCACTCTGGTGAAAGGCCATTTCAATGTGAAATTTGCTTTAGAAAATTCACCCTTAAGCACAGCATGCTGCGTCACATGAAAAAACACAACGGTCTTCACATCAATGGCAGTCAATCGGCTAGTGACAATATGGCCAATGGCAATTCTGGCTCTGATTATTCAGATGACGAACAAGCGCCAAATGCATTGCCAACACCTGCATTACCCATACCAAGTACCAGTATTAATGCATTATTGATGGGCTCAAAATTTCAAGAACTTCTACAAAAAGCTAACGCATGGCGAAATGGTAACTTGAATGCAGCATTACACGAAGGTAAAGAAAATCATTTAGAGGAAACAAACACACCACAGACATCGGATTTGATTGGCAACTTGTTGGGCATCAGTGATCAGGgtatattaaacaaattgatgtcaTCACCAGATGAAGCTGCCAAATTTTTAGGTGTTGACAAATAA
Protein Sequence
MLVATNPQQTVQNSPKTTRANTPIKMERRDSSSSYSSLEDLEQERKKLNAVTSTPLVASEPVNACNLSVKTTTKSIQRTDIIDQEQNLHQRMQESDEANDYDEDESADEKSSSQPREHYKRRLSGRSLSDKPTSYLVDYNANNPNSLRKKFRSNRFVLNNGDESGFVDTSNNSQLRNTTTTTTTTSLSLAVTTTNESNSNNNSKSNSCSDSSSPPQSNGNSSPESGIGEREDMKYMCPICDAVSQTAHQFTNHIRCHNYASGHTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFNANNNNNNNYNNSNNATTTTTTPATNKTTILSNGELNEGVKLSTTTTDTTLTAATTAITTPSSPAAAATTTTTVNTSDNNYSQKETTGANVERLNGNANLESYESDGGCSSDSSAGHVYSNNNNDKQNNNNDFQINNNNYKRKHSDDDQPHPDIPDSKESNHDLLKRRLRLDTSRSPSVSYNSNNNNNNNNNNDLINNTTLNSSFVCPICNESDFADSLALDQHIDNKHPKIPAKCKHCGVIYLTQHQFNIHVCPADIKDSLNLSVKERRLSENSKQHTEENHEEAEDNVRQRHELFQHFKNVMAQSHSPSSHFNQDLTEDDIKSEPSAHDSKDLADIQSILNMTASSSNSNLLRNFEQSVNTPSSQYSYDRDEEEAQDAFTSEFRKMKLRGEFPCKLCPAVYPNLRALKGHNRVHLSEAGPAGPFRCNMCPYSICDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCEDTTKKLQMFSAELEEDYDSMSYHQHPPKDRSTPVSHLKERLTAGDSPSSKPVKIQVKNLEDLLDKSTASSGYHDSYDRRNIETSQVPIDMSMDVLDLSKKPCAPQPPVQEEKVESSIPMPSLPKPNVIQPSSEVIKSKIVPTEVDPKLDIPALDKQHQQLLLAQQQLLSDPNQLMQQLYRNLLFPQFPPFFMPNTFMNSNFTDFQKLAPILTRMMGGVAAAAAVPNNDIEKPSTLTTPMNTITSSSMPSMSPLIPEKSNSAPLDTMSSPKSLHSPNSNHLPIPRHIMPPTASSHSPNLLPTMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASSAANINNISHFQAVAQAHYNSAPPSVSSHSPISDQVKCAILAQQLKARKDTDLLQQALAHGSNSVVANSNMFSQTGPTNLMNGQTNFYAFNPNHSHHLRQNGTPNGSMEDDEPKLIIDEDDEEEEEEDEEDIEEIPDDHEEDEENELDLSQCKDKLETRHLPTTVEEVKLKSDKVPDSAKKVAESIFEQAIKAKQTISPFAKTIESSLVTSNNNTMKSMIAQAPAVGKFLKEVASSSFKDESQDLVSVSELVDNATNNSVSFNSYFRPSDVANHMEPSDEDGLVASSASESNNSGAEDTVSTEKPKKKSAYSLAPNRVHCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVSEPIPLPKSVEEIERMQREREEEERKRKAEEQRERLEKEQIEKQKLEQEQQQKQAFLKQLAVAQFQQQFNQKPEVNPISSSELPFKCHLCENSFSERLQCLEHIKSLHTQEFALLLSKGAIENETDSAQMTSNEEDERQRSAAEDSAKGGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICFRKFTLKHSMLRHMKKHNGLHINGSQSASDNMANGNSGSDYSDDEQAPNALPTPALPIPSTSINALLMGSKFQELLQKANAWRNGNLNAALHEGKENHLEETNTPQTSDLIGNLLGISDQGILNKLMSSPDEAAKFLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00260066;
90% Identity
-
80% Identity
-