Basic Information

Insect: Panzeria rudis
Gene Symbol: ftz-f1
Assembly: GCA_956483635.1
Location: OY101451.1:18846305-18869187[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.6e-14 4.2e-10 41.1 0.4 7 76 1 71 1 103 0.66

2 2 2.9e-73 7.5e-69 234.6 1.8 156 408 170 415 146 417 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.6e-14	4.2e-10	41.1	0.4	7	76	1	71	1	103	0.66
2	2	2.9e-73	7.5e-69	234.6	1.8	156	408	170	415	146	417	0.92

Sequence Information

Coding Sequence: ATGAGAGGCGGTAGAAATAAGTTTGGACCCATGTATAAAAGAGATCGAGCGCGAAAACTGCAAGTGATGCGACAACGACAAATTGCATTGCAGGCCCTGCGAACGTCAATGGGTACGGGGGAAATCAAACCCACTCCCATATCGCCCGGCTATCAACAGGCCTACACAAATATGAATATAAAACAAGAAATACAAATACCTCAGGTATCCTCTCTAACGCAATCACCCGACTCATCACCCAGCCCCATAGCTATTGCCTTAGGTCAGGTTAATGCCAGCTCTGGTGTGATAGCAACACCTATGAATGGCAATAGTGGAGCTGGTGGGGGTGGTGGAGGTGGCGGTGGTGGTGGTGGCAATAATggtaataacaacaacaatacaagTGATGGCATCAACCGCGTTGGTAGTGGCAGTGGTGGTGGCAGTGGTAATTGCCATGAAGCTGGCACAGGATCCTTACAAAGTGCCAGCGATTCAAAACTGTGCTTCGATTCGGGCACACATCCTTCTAGTACCGCCGATTCCATAATAGAACCTCTAAGGGTCTCACCGATGATCAGGGAGTTTGTACAGTCAATAGATGACAGGGAGTGGCAAACGCAATTATTTGCGTTGCTGCAAAAACAAACGTACAATCAAGTTGAAGTGGATCTCTTTGAATTAATGTGTAAAGTTTTAGATCAAAATCTATTTTCCCAAGTTGATTGGGCCCGCAATACTGTGTTCTTTAAAGATCTAAAGGTTGATGATCAAATGAAACTTCTACAACATTCATGGTCCGATATGTTAGTATTGGATCATCTACATCAGCGCATACATAATGGCCTGCCCGACGAAACCCAACTAAACAATGGACAAGTCTTTAACCTCCTAAGCTTAGGTCTACTGGGTGTACCACAATTAGCCGACTACTTCAATGAGCTGCAAAATAAGCTGCAGGATTTAAAATTTGATATGGGCGATTATgtgtgtatgaaatttttaattttattaaatccaGATGTACGAGGTATTATCAATAAGAAAACTGTATTGCAGGGTCACGAAAATGTACAAGCTGCGTTATTAGATTATACATTAACGTGTTATCCATCGGTGACGGATAAATTCAGGAGGCTGTTAAGTATACTGCCAGACATTCATGCCATGGCAGCACGTGGTGAAGAACACTTGTATTCAAAACATTGTGCCGGAAGTGCACCCACACAAACGTTACTCATGGAAATGTTACACGCAAAGCGAAAGGTGTAA
Protein Sequence: MRGGRNKFGPMYKRDRARKLQVMRQRQIALQALRTSMGTGEIKPTPISPGYQQAYTNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNASSGVIATPMNGNSGAGGGGGGGGGGGGNNGNNNNNTSDGINRVGSGSGGGSGNCHEAGTGSLQSASDSKLCFDSGTHPSSTADSIIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHQRIHNGLPDETQLNNGQVFNLLSLGLLGVPQLADYFNELQNKLQDLKFDMGDYVCMKFLILLNPDVRGIINKKTVLQGHENVQAALLDYTLTCYPSVTDKFRRLLSILPDIHAMAARGEEHLYSKHCAGSAPTQTLLMEMLHAKRKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01357984;
90% Identity: iTF_01176970;
80% Identity: iTF_01138091;