Prud022207.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Panzeria rudis
Gene Symbol
Hr39
Assembly
GCA_956483635.1
Location
OY101449.1:21897694-21907493[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.57 1.5e+04 -3.5 0.5 98 160 145 207 115 224 0.51
2 4 0.49 1.3e+04 -3.3 5.1 76 122 279 341 237 420 0.46
3 4 1.3e-16 3.4e-12 48.0 11.2 1 169 502 706 502 710 0.73
4 4 7.5e-80 1.9e-75 256.3 0.3 185 408 690 901 686 901 0.95

Sequence Information

Coding Sequence
ATGTCTACcattaaaactgaaaatgtaacaggaggaggaggaggagcaGTGGTCACTACAACAACAGCGGGAGGAACTTCTTTTCAATTACCCCTAAATATGAGCAATACAGGAGGAGCGGGAGTGGGAGCAATTAGTAGTGCCGGTATAAGCACAACTACTTGTACAACCACCACTACCAGGCATAATGTTTCTGTGACAAATATTAAATGTGAAGTGGATGATGGTGGCAATTCTTCATCCTCAACGAATGGCAATATTGTTTCGGTGGGCTATTATAATTGTTCTAGAGGCATAAGTGGGCCAAGTGTAATAACTGCTGGTCATGGTATACGAATACCGGTAACCAAAGCAGAGGACTCCGACTCAGAAACGGAATTgacaaatattgaaaatttaaaagttaccCGACGAGTGGCTAGCTCGTCTTCCAGTACCACAAATCATCATCATAATGGTCCTCGACCCATGTCTTGGGAAGGAGAGTTGTCCGAGAATGAAGATACACGAGAGGCCGAGTTAATGGATACGGATACAACCATGAGTAATGGTGGCATGCAGGAACCCTCAAATGCTGTGGCGGTTATAAAGAGTGAAGCTACTACCACCACACCTTCTACACCAGGCGGGCGAGGTCCTTTAATAAAAACGGACACGGAACAATTAATGTTAGATATCCATCATGTGGTAACTGGTGGTGGAATTTATCATCCCAAACTAAAGTTGGCACCCACCCAAAGTGATCCcatcaatttgaaatatgaGCCACCTGATCATACAGCCTTGGTGAATTCGCCTTTACTGGCCCGTCAAAAGTCCACCACAGCTTTGCCTCATTTACCTGCCAATCCCAGCCCAGATTCTGCCATACATTCCGTTTATACGCACAGTTCACCTTCGCAATCACCCTTGACATCACGACATGCACCCTATACCCCTTCCCTATCGCGCAATAACAGTGATGCTTCTCATAGCTCTTGTTATTCATATTCCTCGGAATTCAGTCCCACCCATTCACCCATACAAGGCAGGCATCAAGCGCCTCATGGTGTATATGGTAGTTTTAATGGAGCCACGGCTAATAGCTTACAACATTCCGCTTTACTCTATAGGCCCATGATGGGTTCAGGGCAAGCTGGACCGTCGGGCAAATTGGATGCATCAGCAGGAGAAGTGCAAAATTTATCTATGGATGCCTCTTCATCATCTTCGAGTTTCAATATGGCTAGCGATTCTTCAGGCTTACCGCCTTCCCCAGCCGCTGGAATATCCCGCCAACAGCTAATAAATTCTCCCTGCCCCATATGCGGTGATAAAATCTCCGGTTTCCATTATGGCATCTTTTCATGTGAAAGCTGTAAAGGTTTCTTCAAGCGTACTGTCCAAAATCGTAAGAATTATGTTTGCGTACGGGGTGGACCCTGTGCGGTCAGCATTACTACCCGCAAGAAATGTCCAGCCTGTAGATTTGATAAATGTCTGCAGAAAGGTATGAAACTGGAAGCAATAAGAGAAGATCGCACTCGGGGAGGCCGTTCTACTTATCAGTGTTCTTATACTCTACCCAATTCCATAATGAGTCCTTTACTTTCGCCCgaacagcaacagcagcaacagaaTTCTGCACAAAACCTTATGGCCAGTCAACAACATTCACAGTTACAAAATCAGCTACAGCAACGTTTAAATCCTTCTTCCCTGCAATCATCACATCTATCAAATGGTTACGGTTCaccaacaacaactacaattaAAACCGAGCAAGGTGATCCATATAACAAGAATCTAACGGCCGCTCATTCACCTTCATTGAATGGCTTAAATATATCCACGTCACGTTCACATTCTCATTCGCATGCTTCAAATATATCTAATAATATTTCCTCCTCCTCTTCTAATTCACTGCATCACAACAGTATTCCTCAACTTTTACAAGAAATTATGGATGTTGAACATCTTTGGCAATACACCGATGCTGAGCTGGCACGACTTAATCAACCCTTGACCACATCGTCTAGTTCGGCTTCACTTAATTCCAATTCAACAGATTCTTCTGCAGCTGCCAATCAAATGACCAATCCACTGCTGGCCAGTGCTGGTCTCTCCTCTAGCACTAATCCCGACTTGATAGCGCATCTATGCAAAGTAGCCGATCATCGTCTATACAAGATTGTTAAGTGGTGCAAGAGTTTGCCATTATTTAAGAACATATCGATTGACGATCAAATTTGCCTACTCATCAACTCTTGGTGTGAACTTTTACTTTTCTCCTGTTGTTATCGTTCCATCGATACACCGGGAGAAATTAAAATGTCCTTGGGCAAATCAATAACACTGCCACAAGCGAAACTTACTGGTTTTCAGccCTGCATTGAAAGAATGCTGAATCTGACAGATCATTTAAGACGTTTACGTGTTGATCGTTATGAATATGTTGCTATGAAAGTTATTGTACTGTTGCAATCAGATACTTCGGAGTTACAAGAACCCGTCAAGGTTAGAGAGTGCCAAGAGAAGGCTTTGCAAAGTTTACAGGCCTACACTCTGGCCCACTATCCAGATTGTCCATCGAAATTTGGCGAACTGCTGCTGCGTATACCCGATTTACAGAGAACGTGTCAGTTGGGCAAAGAAATGCTGTCTATTAAATCTCGTGATGGTGGtgactttaatttattaatggAGCTTTTAAGAGGAGAACATTGA
Protein Sequence
MSTIKTENVTGGGGGAVVTTTTAGGTSFQLPLNMSNTGGAGVGAISSAGISTTTCTTTTTRHNVSVTNIKCEVDDGGNSSSSTNGNIVSVGYYNCSRGISGPSVITAGHGIRIPVTKAEDSDSETELTNIENLKVTRRVASSSSSTTNHHHNGPRPMSWEGELSENEDTREAELMDTDTTMSNGGMQEPSNAVAVIKSEATTTTPSTPGGRGPLIKTDTEQLMLDIHHVVTGGGIYHPKLKLAPTQSDPINLKYEPPDHTALVNSPLLARQKSTTALPHLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHQAPHGVYGSFNGATANSLQHSALLYRPMMGSGQAGPSGKLDASAGEVQNLSMDASSSSSSFNMASDSSGLPPSPAAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCAVSITTRKKCPACRFDKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSIMSPLLSPEQQQQQQNSAQNLMASQQHSQLQNQLQQRLNPSSLQSSHLSNGYGSPTTTTIKTEQGDPYNKNLTAAHSPSLNGLNISTSRSHSHSHASNISNNISSSSSNSLHHNSIPQLLQEIMDVEHLWQYTDAELARLNQPLTTSSSSASLNSNSTDSSAAANQMTNPLLASAGLSSSTNPDLIAHLCKVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCYRSIDTPGEIKMSLGKSITLPQAKLTGFQPCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELQEPVKVRECQEKALQSLQAYTLAHYPDCPSKFGELLLRIPDLQRTCQLGKEMLSIKSRDGGDFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01259264;
90% Identity
iTF_00760170;
80% Identity
iTF_01138089;