Prud003022.2
Basic Information
- Insect
- Panzeria rudis
- Gene Symbol
- Rel
- Assembly
- GCA_956483635.1
- Location
- OY101447.1:27579221-27584103[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-52 3.6e-48 165.2 0.6 1 168 151 329 151 330 0.93 2 2 1.6 1.2e+04 -2.5 0.0 31 72 630 671 628 675 0.83
Sequence Information
- Coding Sequence
- ATGGAAAATATGATACCACATTTTAGCGTCAcaaatgaaaaggaaataacCGATTTGGATACACTGGAGCGTATACGAAGTGTCAGCGAATCATCTGTGAGCGGTACCAGTGGCTATAACAGTACAACATCTCCAGGTCCAGATAATTCTCCCATTTCATGTGGATATTCACCAGTACAATCGCCAGACTCTGTTCTACAAGCAGAATTTTCCCAGTTGCTTATACCACCACCATTATCATATCAACAAAATTCATTGCAATACGCACAACTGCAGAATGTGGACATGAATATAAACAACAATCAATCAATGTTATATGAACCTAATATGAATTTCTCACCTCATTTACACTTTGTAAATCCTGTGAATAATCAATTGTGTCAACAGCCCATTTCAACAACAAATGCAACAATGCCTTATGCAGAAGTGAAATACGAATATGAAGCAACTTTGCGTATAACGGAGCAACCGGTAGAAAAATTTCGTTTTCGCTACAAGTCCGAAATGCATGGCACACACGGCTCTTTAAATGGGACAACCTCtcaaagaaatacaaaaacttttccCGAAGTTGAATTGTGCGGTTATAAGGGACCAGCTATCATACGTTGCAGCCTCTTTCAAACTAATCTTGAAAGTCCACATTCGCATCAGTTGGTAGTGCGCAAAGATGACCACGACATATGCGATCCGCATGAATTGAAAGTTTCTCAAGAAGTTGGCTATTTTGccgaatttaaaaatatgggTATTATACATACGGCCAAAAAATTCATTGTCGAggaattattaaagaaaaagcgaAAGCGACTTGGTCgagattttttaacaataaaagaaGATCAGGAGCTGTATAAGCAAACAGAAAAGGAAGCAAAGGATATGAACTTAAATCAGGTTCGTCTATGTTTTGAAGCATTCCGTGTTGAAGAGAACAACTCATACACACCTATAGCTCCTCCAGTATATTCGAATCCTATTAACAATCGCAAGTCAGCACAGACTGGAGAACTGCGTATTGTACGGTTGAGTATAGCAACGGGCAATGTTGCTGGTAACGATGATCTGATGTTATTGGTGGAAAAagtcagtaaaaaaaatataaaagttagaTTTTATGAAATGGTTGAAGATGAGCAAGTATGGGAGGCTTTTGCATCATTTCGCGAATCCGATGTTCATCATCAATATGCTATCGTATGTAGAACACCACCTTATAAGAATAAAGATATTGACAAAACTGTTGAGGTATTTATTGAACTTGTAAGACCTTCAGACGATGAACGTAGCTATCCGCCAGTATCATTTCGATATAAGCCAAGCTATGCTGTAATATCACGTAAACGAAGACGGACATGCTCATCTTTTAATAGCGGGTCTTGTAGTAATTCCGGATCGTTAAGTTCTGGAGAAATACCTAAAACAATTCAAGAACAACAAAACTCGATGAATATTGAATGTGCTTCAACTGAACTTAAATCAATATTAAACAATACAGATTTTAATAAGTCGGATATTTCTGTTGACTCAAACTTATTAGCCTATTTAGACGATCCAAAATTGACTGACTTCGACTTCGAAGGAGAGTCATTTAGTAATCCCATCGAAAAGGATGGCATTTGTGTGGGCAGCGATGCGAAGAAATCTATGTATCATTATAAGAAGCAAATGATAAGCAAGAAGCAAATGGATATGGCCAGACAAGGCGTACAGCCTCAACAGCCCAATTTGTACTTACAGCGCATTTTAAACATATTCCAAGATACCATCAGGTCTGCGATACCACTTAATTCGACAAGATGGAGCAGCGCTGCTGAACAAATTACTAAAATCATAAATGAACATTCAGAAAAATATGGAGATTCTCTAATACATGAAATCGTACTTTCGAATAACAACAAACTTGCTATACCGATTTTTAAAGTATTGggctattttaaattaaatgaacttttaaatactttggtaaataaacaaacacaaactGCGTTACACTATGCCTGTCTTTATGGTCAGCCAAACTATATACGACCTCTTTTAAAATTGGGCTGCAATCCTAATATTCAAGATGCCGATGGTAATACAGCACTTCATCTTGCAGTGACTGAAAAGCACTTGAAATGCTTAGAAAGTTTTATAAACTCGgaaatgattttaaatttaaaccatTTAAATGATGATGGATTTACGCCGTTACATTTAGCCATACGCGATAACAATTATGACATTGtcgcaaaattattaaaatatgatGCAACCACAGTAATAACGCCAAGTAGTAAAGATGGCAGTAGTGCTTTACACATGGCGGTGCAACAACAAAGTTTAAAACTAATAAAGCTAATATTAGAAAATGAACAGTTAGTCGCTTCTGTATTATATGCAACCAATAGGGCTGGTTATACTCCATTGGATTTGGCCAAGCAAATGGTTCCAAGTGATGATCAGgggaaaaaaattctaaacgcACTCCTAGCATTCTATAACAAATATCCATCCCgtgaaaaagcacaaaaaatggATATAAATACTTGTGACAATGATTTAGATGAAgtgcatgaaatttttgtaaaagaagAAAATTCATGTTCATCTACCGAAGACGATGAAGATGATAACAACAGCGGTATAAATGCAGCAGAGTTGAATGATAAAACATCTTTAACTTCAAAagcgaaaataataaaagaatctgaaataaaactaGAACTGGCCGATGACAATGCTGCTTTCAGTATCCTCAGTAAAAGTGATTTGGAAAAAGGTTTGAATGACAAAAGAATTATGTCGAAACTCTGCCTTGAACTAAATGATAACGAGAAATGGAAAACGCTGGCAAAGGATATGGAACTGccgcatttttatttaacaaatgcCGAAGCTTTTCTAAACTCATTGAAACGAAATTTAGATACTATATGTTGTACACGACTAAGTTTAGCATTGAGAAAAATTGacgaaaatttaattcaaattataaaaaaataa
- Protein Sequence
- MENMIPHFSVTNEKEITDLDTLERIRSVSESSVSGTSGYNSTTSPGPDNSPISCGYSPVQSPDSVLQAEFSQLLIPPPLSYQQNSLQYAQLQNVDMNINNNQSMLYEPNMNFSPHLHFVNPVNNQLCQQPISTTNATMPYAEVKYEYEATLRITEQPVEKFRFRYKSEMHGTHGSLNGTTSQRNTKTFPEVELCGYKGPAIIRCSLFQTNLESPHSHQLVVRKDDHDICDPHELKVSQEVGYFAEFKNMGIIHTAKKFIVEELLKKKRKRLGRDFLTIKEDQELYKQTEKEAKDMNLNQVRLCFEAFRVEENNSYTPIAPPVYSNPINNRKSAQTGELRIVRLSIATGNVAGNDDLMLLVEKVSKKNIKVRFYEMVEDEQVWEAFASFRESDVHHQYAIVCRTPPYKNKDIDKTVEVFIELVRPSDDERSYPPVSFRYKPSYAVISRKRRRTCSSFNSGSCSNSGSLSSGEIPKTIQEQQNSMNIECASTELKSILNNTDFNKSDISVDSNLLAYLDDPKLTDFDFEGESFSNPIEKDGICVGSDAKKSMYHYKKQMISKKQMDMARQGVQPQQPNLYLQRILNIFQDTIRSAIPLNSTRWSSAAEQITKIINEHSEKYGDSLIHEIVLSNNNKLAIPIFKVLGYFKLNELLNTLVNKQTQTALHYACLYGQPNYIRPLLKLGCNPNIQDADGNTALHLAVTEKHLKCLESFINSEMILNLNHLNDDGFTPLHLAIRDNNYDIVAKLLKYDATTVITPSSKDGSSALHMAVQQQSLKLIKLILENEQLVASVLYATNRAGYTPLDLAKQMVPSDDQGKKILNALLAFYNKYPSREKAQKMDINTCDNDLDEVHEIFVKEENSCSSTEDDEDDNNSGINAAELNDKTSLTSKAKIIKESEIKLELADDNAAFSILSKSDLEKGLNDKRIMSKLCLELNDNEKWKTLAKDMELPHFYLTNAEAFLNSLKRNLDTICCTRLSLALRKIDENLIQIIKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01398202;
- 90% Identity
- -
- 80% Identity
- -