Prud029832.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Panzeria rudis
Gene Symbol
dl
Assembly
GCA_956483635.1
Location
OY101449.1:138082142-138084046[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.3 2.5e+04 -3.5 4.5 112 135 11 33 2 54 0.39
2 3 1.4e-74 1e-70 238.6 0.1 1 169 56 226 56 226 0.99
3 3 1.4 1.1e+04 -2.3 0.3 61 84 542 565 533 594 0.66

Sequence Information

Coding Sequence
ATGGATCCAATTCACCAACAGCATCAACAACAacggcagcagcagcagcagcagcagcaacaaggacaacagcaacaacaacaacagcaaaatataatgtataatgTTATGGAAACACAGCAGCAGTCgacaaataacaataaaaatctaCGCAAAAAACCCTTCGTGAAAATAATAGAGCAGCCGGCCGGTAAAGCTTTAAGATTTCGTTACGAGTGCGAAGGTCGTTCAGCTGGCTCTATACCAGGGGTTAATTCGACACcagaaaataaaacatatccCACCATAGAGATTGAAGGCTATAAAGGACGTGCAGTAGTTGTTGTGTCATGTGTCACCAAAGATCAACCCTACAGACCTCATCCTCACAATCTGGTCGGCAAAGAGGGTTGCAAGAAAGGTGTATGTACAATAGAAATCAACTCAGAGACAATGAGGGCTGTGTTTGGCAACCTCGGCATACAGTGTGTCAAAAAGAAGGACATAGAGGCGGCCCTTAAAGCTCGTGAAGCAATTCGTGTAGATCCTTTCAAAACTGGATTTACGCATCGATTTCAACCGTCTAGTATCGATTTAAACTCGGTAAGGTTGTGTTTCCAAGTGTTTATGGAAAGCGATCAGAAGGGACGTTTCACACAGCCTTTAGCTCCGGTGGTCTCCGAACCGATCTACGACAAGAAGGCCATGTCCGATCTGGTCATATGTCGCCTGTGCAGTTGTTCGGCAACTGTGTTGGGTAAcacacaaataattttgttgtgcGAAAAAGTAGTCAAAGAAGATATTTCCGTGCgtttttatgaagaaaataatGGTCAAACTATATGGGAAGCGTATGGAGAATTTCAACATACCGATGTACATAAACAGACTGCCATAACGTTTAAAACGCCACGATATCGTAAAATTGATATATCAGAAGCCGCAAACGTGTTTATACAACTGAAACGTCCATCGGATGGTGTTACGAGTGAATCACTTCCATTCGAATATAAACCATTGGATTCAGATCCCGAGCATTTGAAACGTAAACGTCAAAAAACTAACGGTGATAACGTACAGCAACTGCAAATTCATCAACAAAATGATCACCAAGATGGTcgtcaagcaaaaataaattgttggaATGGGAAGAATATACCAGCGATTAAAACGGAACCAAGAGATGCATCGCCACTACCATATGGTGTTTATCCACGGGGTCCACACCCACTATCACCATCCGTCGCGTATACTCACAATACACCATCGCCCTACAACATGTATGTGACAGTGCCAGCAGAAGCAGAGGGCAATCAACAAGTAATTTCGCCCAACCAACAGTACAATACCACCAACACAGGTGGCGGCAATAATGCGCCCCAACCGATggatattataaattataatgaaTTTGGCCAACAGACGCCACAACAAAAGCAGCAATATCATGGCAATAATTTTGGAGGCGCAGGCGCAACCCATTGGGATACAAAATTTAATCCAGAACCTGCTGTTGGAAATAACAATTTGGGCAATCTCAACAATGCAAACACGTTTGCTATGGACAATCTCTTAACACCTGCCAATGCAGCTGGAGGGCCAAGCGAGGGCACTAGTGCTGCCTGTTGGAATCTGACTTCCAATAATTTTCATCCTCATCATCATCACGTGCAGCAGCAATATCAACAGCATCAAACCAAAAATGTAAGCGTTGCAACTAACAATAATATTGGTGTTCCCAACATAGCAGTCTCTGCCACAAATGCTAATAATGGCAGTAATGCCAACAATAACGAACATGGTCTCAGCAATCTTTTAGCATTTGACAGTGAGCAATTAGTTCGCATTAATTCCGAGGACCAAAAAATGTTGCGACTTAGTACCGAAGACCTGCAGATTTCAAATCTTTCAATAGCAACATAG
Protein Sequence
MDPIHQQHQQQRQQQQQQQQQGQQQQQQQQNIMYNVMETQQQSTNNNKNLRKKPFVKIIEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIEGYKGRAVVVVSCVTKDQPYRPHPHNLVGKEGCKKGVCTIEINSETMRAVFGNLGIQCVKKKDIEAALKAREAIRVDPFKTGFTHRFQPSSIDLNSVRLCFQVFMESDQKGRFTQPLAPVVSEPIYDKKAMSDLVICRLCSCSATVLGNTQIILLCEKVVKEDISVRFYEENNGQTIWEAYGEFQHTDVHKQTAITFKTPRYRKIDISEAANVFIQLKRPSDGVTSESLPFEYKPLDSDPEHLKRKRQKTNGDNVQQLQIHQQNDHQDGRQAKINCWNGKNIPAIKTEPRDASPLPYGVYPRGPHPLSPSVAYTHNTPSPYNMYVTVPAEAEGNQQVISPNQQYNTTNTGGGNNAPQPMDIINYNEFGQQTPQQKQQYHGNNFGGAGATHWDTKFNPEPAVGNNNLGNLNNANTFAMDNLLTPANAAGGPSEGTSAACWNLTSNNFHPHHHHVQQQYQQHQTKNVSVATNNNIGVPNIAVSATNANNGSNANNNEHGLSNLLAFDSEQLVRINSEDQKMLRLSTEDLQISNLSIAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-