Pger023050.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Panorpa germanica
Gene Symbol
Hr39
Assembly
GCA_963678705.1
Location
OY783212.1:3475104-3478499[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.69 1.3e+04 -3.8 4.4 96 159 192 252 114 283 0.46
2 4 2e-08 0.00038 21.1 0.1 1 21 402 422 402 427 0.93
3 4 0.024 4.5e+02 1.1 0.0 82 120 446 481 425 503 0.70
4 4 9.4e-74 1.8e-69 236.2 0.1 201 408 507 719 451 719 0.89

Sequence Information

Coding Sequence
ATGGCGACGCCGCAAGGGGGCAATGCCTCATCGGCGTCACCAAGTGGACGCAGCAATGTATCGGTTACTAGCATCAATTGTACAGCAGAAACaaatgGACAATATTCATATGGCAATAATTCGAATTCTCTAAATGGCATTAGGATAGCCGTACCAACAATGGAAGATGTTTCCGATGAATCAGACAGTGAACTAAGTAAAATTGACTTTAATCATCAtgttaatttaagaaataaaaaatttagacCCACAAATGAACCACCCAGACCAATGTCCTGGGAGGGAGGACTCTCAGACGATGACTTAATGGACACAGATTCACAGCGAACAGAAATAGGAACTGCAAAGGAAAAATTAGACGAAACAAAGACGGATTTTGTTCATGTTTATCAAGCGTCTAAGACATCCACTGACGGAGAACAAACGCAGGAAAATAGAGTTGTAAACGATGTTAGTATTAAATATGAAGCACCAGACAGCATACAAAATAATGTACAGAATTCATTATATAACGGTTCTTTGGAGCATCCTTTAAGATCGTTACACAAAAGCCATACAATCATACCTGACTTGCTAGGGTCACCTCTGCTTACGAGACAACATAAAGCAGCTTTACTTCCAGCGAATCCGAGTCCGGACTCCGCCATACATTCTGTATATACGCACAGcTCTCCAAGCCAATCTCCACTCACAGCGCGTCATGCACCTTATACTCCAAGTTTGAGTCGAAATAATAGCGATGCGTCACACTCAAGTTGTTACAGCTACAGTTCAGAGTTCAGCCCTGCACATTCACCCATTCAGGGGCGGCATATAGCATCTGTCTTACAAGGATCACCTTTACATCACAGTGTTCTTATTCGTCCCCTGGGGGTGGATGAAACCTTGTCAACCATTGATAGTCATATAGGGGATGAAATTCCCGAAGATGATCGTCCATCTCATTCACTTGCGGGAGCTGCTGGTATTTCGCGTCAACAACTTATAAATAGTCCCTGTCCAATTTGTGGTGATAAAATATCAGGCTTTCATTACGGAATTTTTTCTTGTGAAAGTTGCAAAGGATTTTTTAAACGAACGGTTCAAAATCGTAAAAATTATGTTTGTCTGCGGGGTGCAAGCTGTCCTGTTAGTATTGCAACCAGAAAGAAATGCCCTGCTTGCCGGTTTGATAAATGTTTACAACGTGGCATGAAACTTGaagCAATTAGAGAAGATCGAACACGAGGTGGAAGAAGTACATATCAGTGTTCATACACCTTACCACAAGGAACAGTATTATGTCCTGGAAGTCCTTTAACGGATTCTTCCATTGGCAGAGCAGCTGCTTCACCTTTGGCAGCAAATATTTCAGCTAATAAATTCATGAAGTCTGAACATGGGGTTCCACCATTATTACAAGAAATAATGGATGTAGAACATTTGTGGCAGTACAACGAATCTGAACTTCATAAACTTAGCAGAGGTTCGAACCATTTGCAAGGCAACTCACAACCTAGCGTTGCTAGTTTAGCAAATAATCCTCTTTTAGCTAGTGCAGGTCTAGCACATAGTGAAGACTCCAATCCCGACTTCTTAGCTAATTTGTGTAACATTGCAGACCATCGACTTTACAAGATAGTCAAGTGGTGCAAAAGTTTACCTTTATTTAAGAACATATCGatcGATGATCAAATTTGTCTTCTTATTAACTCATGGTGTGAGTTGCTTCTATTTTCCTGTTGCTTTAGATCAATGGATACCCCTGGTCAAATACGTGTATCACTTGGAAAGAGCATCGGCATAGACCAGGCACGACATAGTGGCCTTCAAGCATGCATTGAAAGAATGCTTAATCTCACGGGACATTTACGACGCCTACAAGTAGATCGATATGAATACGTTGCCATGAAAGTAATCGTGTTGTTAACATCAGATACATCTGAGTTAAGAGAACCGGAAAAAGTTCGTGCAAGTCAAGAGAAAGCTTTGCAGGCATTGCAAGTCTATACTCTAGGACATTATCCGCTTATTCCAGCGAAGTTTGGAGAATTATTATTGAGAATTCCAGAGCTTCAAAGGACATGCCAGgttgGTAAGGAAATGTTAACAATCAAATCAAAAGAAGGTGAAGGGCCaagttttaatttgttaatggAATTGCTTCGAGGAGAACATTAA
Protein Sequence
MATPQGGNASSASPSGRSNVSVTSINCTAETNGQYSYGNNSNSLNGIRIAVPTMEDVSDESDSELSKIDFNHHVNLRNKKFRPTNEPPRPMSWEGGLSDDDLMDTDSQRTEIGTAKEKLDETKTDFVHVYQASKTSTDGEQTQENRVVNDVSIKYEAPDSIQNNVQNSLYNGSLEHPLRSLHKSHTIIPDLLGSPLLTRQHKAALLPANPSPDSAIHSVYTHSSPSQSPLTARHAPYTPSLSRNNSDASHSSCYSYSSEFSPAHSPIQGRHIASVLQGSPLHHSVLIRPLGVDETLSTIDSHIGDEIPEDDRPSHSLAGAAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGASCPVSIATRKKCPACRFDKCLQRGMKLEAIREDRTRGGRSTYQCSYTLPQGTVLCPGSPLTDSSIGRAAASPLAANISANKFMKSEHGVPPLLQEIMDVEHLWQYNESELHKLSRGSNHLQGNSQPSVASLANNPLLASAGLAHSEDSNPDFLANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMDTPGQIRVSLGKSIGIDQARHSGLQACIERMLNLTGHLRRLQVDRYEYVAMKVIVLLTSDTSELREPEKVRASQEKALQALQVYTLGHYPLIPAKFGELLLRIPELQRTCQVGKEMLTIKSKEGEGPSFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01136971;
90% Identity
iTF_01136971;
80% Identity
iTF_01136971;