Pger017703.1
Basic Information
- Insect
- Panorpa germanica
- Gene Symbol
- Rel
- Assembly
- GCA_963678705.1
- Location
- OY783209.1:13732169-13738762[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-42 2.9e-38 132.5 0.3 1 168 113 297 113 298 0.89 2 2 1.8 2.3e+04 -3.8 0.5 99 114 537 552 523 583 0.49
Sequence Information
- Coding Sequence
- ATGGAGAATTCCAATACATACTATGATGACAACTATGTAGGAATGAGTTATCGCGGAGATAGCAGTCCTGCTTCCACAAGCTCAATGGAGTCACGCGAAAGTAGCAGTAGCGCTCCATCCCCGATGTCCATTTCGATGTCTCCACACAGTATGTCTTCCACTGAAAATATGCCGTCTGTTGGACTTATTAATTTAAACCAAAATGTCTATCAGACCTTTACATACATTGGAGATTATAATAACATGGAGACTGATTATTTAAACCCCACCCAATATAATATAGGACATTATCAGAATACAAATGTTTCGGCATCACAACATGCATCAGCTCCTTTTCTTAAAATTGTGGAGCAGCCTGTTGATAAATTTCGTTTTCGTTACAAATCTGAAATGATGGGGACACATGGAAGTCTTATGggaaaaaaaacagaaaaaaatcgGAAAACTTATCCGACGGTTGAGTTAAAGAACTGGACGGGGCCAGCAATTATTAGATGTTCGTTATATCAAGCAGATGATAAAAATAGATCACAGCATACCCATCGACTTGTATTACGGCACGGTGGATCCGACGAAGACAGCAATGATCCTCATGATGTTATTGTTAATAAAGAGAACGGTTATTTGGCTGTCTTCCCTGGAATGGGCATAATTCACACAGCAAAAAAACACATTGCTGAGGAACtgattagaaaaaaaattgctgAATTAAACAGTAACCCAAATAATAAAGGAAAAATTCATCCAATGGTTATACAACAAataaaagAAAAGGCAGCACAGGAAGCAAAAACTATGAATTTGAATACAGTTTGTTTAGGATTTGAAGCATTCAAACCTGAGTCGTATGAACCTATTTGTCTAAGGATTTATTCGACACCTATTAATAACATGAaaaGTGCTTTGACTGGTGAGTTAAAAATTTCAAGAATGAGTAAAAATACCAGCAGTTGTATAGGACAAGAAGAAATTTTCATGTTTGTTGAAAAAGTGGGAAAAAAAAATATCAAAGTTCGATTTTATGAAGTGGACGAAGATGAAAATGAAGTTTGGGAAGATTATGGTAGATTTTCGGAACTAGATGTGCATCATCAGTATGCCATTGCGTTAAGAACCCCACCTTACCGAGACTCGAACATTGAGAGAACTGTTGATGTGTTCGTTCAGCTGTACCGTCCTAGTGATGGGGATAGAAGCGATCCaataaaattttcttataaGCCTTGTGGAAAAATTACTGGATCTGATCGCAAACGAGCTAGAACAGAATCTAGCTTTAATAGTGCAGACTTGCCAACAGTATTACAGGATCTTCCCAGTGGAGATTTGTCATCTTTTGATTTGGACAATATCATTAAAGACAATCCCGAAGGCATGAATTCTTCtgagtttattaattttatgaaatctTTTGGAACAGAATTCCAAGAAAGCTTAACCGCTGAAATGATGACAAATCCTACTGAACATTTGCGAACTGATGGAACAAGCAATACTAGAATAAACAGAGATATCGAACCACCTAAAATCTCAAGTGGAGAAAGGGAAAATACGCCTTACGATGAACGTGTTATGAAAATCcaagttaaaaaaattttgCAAGAAATTGCAtgtaataaaagtaaagaaaataaggaaGAAGTTAAAAAATCagttagaaaaatttattatcaaggGAATAATGGAAACACagTGCTACATAATGCTATTGAACATGATCAAATGGATTTAGTTCGAGAAATTATGAACTTACTGACTCAAACTGGCTTAACAGAAGCATTGAACACTCGAAATGATAAAGGTGAAACATGTCTTCACACAACGGTACGAGGAAGCCATGCTCACTATATTAAGCCCTTATTATCAGCAGGAATAGATCCCGATATTGCGGATGATGATGAAGGTCTGACAGCTTTACATATAGCTGCATATGAGGGAAATGCAACGATTATTTCACAGTTACTAAATTGTGCTAATTTAGGAAGCAATAAAATTGACATCAACAAACAAACGAGTGATGGATGCACGGCGTTGCATTTGGCTGTACGGAAAAATCATCCAGAAACAGtagttttgttaataaaaaatggaGCCAATGTTAATATAAGAGAAACTCTTCATGGCTGCACTCCACTTCACACAGCTGTCGAAATAAATAGTGAAGATATAGTTAATATCTTACTCAAAGCCAAAGAAataaatgTCGATTCACGAAACAGTACCGGACATACACCATTACATTTAGCCTGTGTCGTTGAATGCGGATCTCAAAAGGGCTCTATTAATCTTGTAAAATTATTGCTAGATAGCAAAgCGGATCCTAATCTAGCGTATGCTTCTCGTTGTGTTAAACAAGAACAAGTCAGTGATGAAGACGAAGATGTTGACGCTGATGAGCCTGAAATGCCTGATACTGCTTTAAATTCATTTGATCTAGCTTCTTCCAATCCCGAGATTCTACGAATGCTGAATACATATATTGTATCAATTGAAACAATACCAGAAATAAAATTGGAACCATTGAGTGAAACAGAACTAATTAAAGATGAAGCTATGGACGTTGAAGGTGTTACAGTAAAAATAGAACACACAAGCACTATGTTTGATGAGAAATGTTTAACAGAATTATGTACAATTATGGATAAATCTATGGATTGGAAAAAGCTTATACCATTATTGGATTATTCTTCATTACACACTGTTTTTGAAAAAGCTGCTAGTCCTACACGAGCGCTAATTGATCAGATAGAGTTGCAAGGAGATTTGAGCTTACATGACCTAGTGGAACTGCTAAGCGCTGTGCAACAAATCGAGGCTGTTGCAGTTATTGATCAAATGATTGCTAGGCAAACCCAAATGTGA
- Protein Sequence
- MENSNTYYDDNYVGMSYRGDSSPASTSSMESRESSSSAPSPMSISMSPHSMSSTENMPSVGLINLNQNVYQTFTYIGDYNNMETDYLNPTQYNIGHYQNTNVSASQHASAPFLKIVEQPVDKFRFRYKSEMMGTHGSLMGKKTEKNRKTYPTVELKNWTGPAIIRCSLYQADDKNRSQHTHRLVLRHGGSDEDSNDPHDVIVNKENGYLAVFPGMGIIHTAKKHIAEELIRKKIAELNSNPNNKGKIHPMVIQQIKEKAAQEAKTMNLNTVCLGFEAFKPESYEPICLRIYSTPINNMKSALTGELKISRMSKNTSSCIGQEEIFMFVEKVGKKNIKVRFYEVDEDENEVWEDYGRFSELDVHHQYAIALRTPPYRDSNIERTVDVFVQLYRPSDGDRSDPIKFSYKPCGKITGSDRKRARTESSFNSADLPTVLQDLPSGDLSSFDLDNIIKDNPEGMNSSEFINFMKSFGTEFQESLTAEMMTNPTEHLRTDGTSNTRINRDIEPPKISSGERENTPYDERVMKIQVKKILQEIACNKSKENKEEVKKSVRKIYYQGNNGNTVLHNAIEHDQMDLVREIMNLLTQTGLTEALNTRNDKGETCLHTTVRGSHAHYIKPLLSAGIDPDIADDDEGLTALHIAAYEGNATIISQLLNCANLGSNKIDINKQTSDGCTALHLAVRKNHPETVVLLIKNGANVNIRETLHGCTPLHTAVEINSEDIVNILLKAKEINVDSRNSTGHTPLHLACVVECGSQKGSINLVKLLLDSKADPNLAYASRCVKQEQVSDEDEDVDADEPEMPDTALNSFDLASSNPEILRMLNTYIVSIETIPEIKLEPLSETELIKDEAMDVEGVTVKIEHTSTMFDEKCLTELCTIMDKSMDWKKLIPLLDYSSLHTVFEKAASPTRALIDQIELQGDLSLHDLVELLSAVQQIEAVAVIDQMIARQTQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -