Basic Information

Insect: Pandemis heparana
Gene Symbol: Znf296
Assembly: GCA_963854515.1
Location: OY978006.1:10852460-10860439[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.049 3.2 9.1 2.4 3 20 184 201 182 205 0.91

2 11 2.2 1.5e+02 3.9 0.4 3 23 246 266 246 266 0.94

3 11 0.01 0.68 11.2 0.1 2 21 367 386 366 387 0.93

4 11 0.0003 0.02 16.1 0.5 1 23 395 418 395 418 0.96

5 11 7.5e-05 0.0049 18.0 4.9 1 23 439 461 439 461 0.98

6 11 9.7e-06 0.00064 20.7 4.2 1 23 468 490 468 490 0.98

7 11 1.6e-07 1e-05 26.4 2.3 3 23 504 524 502 524 0.96

8 11 3.7e-05 0.0024 18.9 3.2 1 23 530 552 530 552 0.99

9 11 2.6e-06 0.00017 22.6 1.7 2 23 559 580 558 580 0.96

10 11 2.5e-07 1.7e-05 25.7 1.4 1 23 586 608 586 608 0.99

11 11 0.0057 0.37 12.0 0.5 1 23 614 636 614 636 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.049	3.2	9.1	2.4	3	20	184	201	182	205	0.91
2	11	2.2	1.5e+02	3.9	0.4	3	23	246	266	246	266	0.94
3	11	0.01	0.68	11.2	0.1	2	21	367	386	366	387	0.93
4	11	0.0003	0.02	16.1	0.5	1	23	395	418	395	418	0.96
5	11	7.5e-05	0.0049	18.0	4.9	1	23	439	461	439	461	0.98
6	11	9.7e-06	0.00064	20.7	4.2	1	23	468	490	468	490	0.98
7	11	1.6e-07	1e-05	26.4	2.3	3	23	504	524	502	524	0.96
8	11	3.7e-05	0.0024	18.9	3.2	1	23	530	552	530	552	0.99
9	11	2.6e-06	0.00017	22.6	1.7	2	23	559	580	558	580	0.96
10	11	2.5e-07	1.7e-05	25.7	1.4	1	23	586	608	586	608	0.99
11	11	0.0057	0.37	12.0	0.5	1	23	614	636	614	636	0.98

Sequence Information

Coding Sequence: ATGGCTTCGTGTTTGAGTGTTCAAAAgctaataaaaatagaaaatttatGTCGGACTTGTTTGTCTAAGGAAACCATTATGTATTCCGTGTTTGATGTGTACTTGGAAACACTTAAATTAGATTATGTTCTCAGTGAAGTTACGGGCCTgaagATTCAGCGAGATGATGGTTTGCCATCAAAAATTTGCCAGGACTGCAAGGAGAGAGCAGTCAATGCATTTAATTATAAGACTAAGTCACACGAAGCACATGCTGCTCTTGAAGATTTATACAATAAGAGTAATTTAGAGacaTTAACAGATAGTATCAAAGTTGAGCAGACTGCTGCCGATGACAATGAGGATTGCTTGGAAATCGATTTTTCTATGGCAGTCACACCAGAAAATTATAGGGAATTGGatactaTAAAAAACGAGACTGAGGGTGATGCTAATCTGGGCCAACAGTCTAAAAATTGCTGCTTAGAGTTTAAATCAATCACTAAACTGGAAGagcatttacaaaaaaaatgtgtgaaaGTGGAGTATGAAGATGAACATGGTACATTTTGCCCGCTTTGTGGAACATGTCATGAGAATGCTGACAATTTAACAAAGCATATGTGGACTAATCATGCAGATTTCATGGGCCCAAAGAagagaggcagaccaaaaaagATACTAACTAGTACAATATTAAGTAAATTATCAGAAAATGGCTACCACATGAAAACTGAGCCTATCAAAGCAAAAGGCTGCCTATTCTGTAAGGATGAATTTAAGACTAAGTTAGAATTAGGAATACATATGTTGGAGCACAAAGgtaCAAAGATTCTCTGTTGCATGCTGTGTAAAAAGATGTATCTCAATATTATGCATTTTGAGCAACATGTTTGCACTGGGACAGATAATTCTGTCAAAATGTTGACTCAAAGTATTGAAACCAGGAGCAAACAAATTGGCTATCTCACAGAAGTGCTACTACAAGACTTGCTGGATCCAAATGGCGATATGGAGAATATAAATGTTCCTGAAGTATGCAGTATGTGCAGTGAAGTATTTTTATCAGAAGAAGATGTTGTGACTCACAATGATGCTGAACATCCGGAACTTTCACTGCGTTGTAACCTCTGTTCCAAGGTATTTGCGACATTAAAATCAGCTGCTCGTCATAGAAATATATGTAAGCAAATAGAAAGAAAATTTATATGCAGTACTTGTGGCCTAAAATTTGCTTATGAAATATCATTAAATAAGCACATATTGAGATTTCACGAGGGTCAAAGCGTGTCGGTCAAGTTCATGGACCCTAAAACGAAATTAGACGAAAGACAGTATCAATGTGATACATGTAGCAGATGTTTTTACAGGAAAGATTTACTCGCTAGACATACGAAACAACATATGCCGAGTGAAAAACTTTTTGAATGCGATGTGTGCAAGAAAAAATTTCATAGGAGGGATAATCTACGGTCACACACGCGTGTACATGAGATCCATCGCGATAAAAATGCTAGCAACAACTGCTTGTGCCTGTATTGCGGTCGAAGTTTCTCGAATTCGTCGAATCTCATAGTTCACATGCGCCGCCACACGGGAGAGAAACCCTATAAATGTGATTTTTGTGGCAAAGGGTTCCCGAGGTCGTCAGATTTGCAGTGTCATAGGCGGTCGCACACTGGGGAAAAGCCCTGTATTTGTGTTGTTTGCGGGAaagGTTTCTCTCGCAGCAACAAGCTTTCGCGGCATATGCGCGTGCACACCGGTCACAAACCGTATAGGTGCACTTATTGCGAAAAGGCGTTTTCGCAGAGCAACGACCTCACTCTCCACATCCGACGGCACACGGGTGACAAACCTTATGTTTGTGAAGTATGCGGCGATAGATTTATTCAGGGGACTTCATTACATAATCACCGGCGCGCGCACGGCCACTTCCCGGCCTCCTCGTCCGATACCCACTCAAATGTCCAAGGACTGTCATATACTTCTATTGCACCTCACAGTTAA
Protein Sequence: MASCLSVQKLIKIENLCRTCLSKETIMYSVFDVYLETLKLDYVLSEVTGLKIQRDDGLPSKICQDCKERAVNAFNYKTKSHEAHAALEDLYNKSNLETLTDSIKVEQTAADDNEDCLEIDFSMAVTPENYRELDTIKNETEGDANLGQQSKNCCLEFKSITKLEEHLQKKCVKVEYEDEHGTFCPLCGTCHENADNLTKHMWTNHADFMGPKKRGRPKKILTSTILSKLSENGYHMKTEPIKAKGCLFCKDEFKTKLELGIHMLEHKGTKILCCMLCKKMYLNIMHFEQHVCTGTDNSVKMLTQSIETRSKQIGYLTEVLLQDLLDPNGDMENINVPEVCSMCSEVFLSEEDVVTHNDAEHPELSLRCNLCSKVFATLKSAARHRNICKQIERKFICSTCGLKFAYEISLNKHILRFHEGQSVSVKFMDPKTKLDERQYQCDTCSRCFYRKDLLARHTKQHMPSEKLFECDVCKKKFHRRDNLRSHTRVHEIHRDKNASNNCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICVVCGKGFSRSNKLSRHMRVHTGHKPYRCTYCEKAFSQSNDLTLHIRRHTGDKPYVCEVCGDRFIQGTSLHNHRRAHGHFPASSSDTHSNVQGLSYTSIAPHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00342456;
90% Identity: iTF_01135068;
80% Identity: -