Basic Information

Insect: Pandemis corylana
Gene Symbol: Znf516
Assembly: GCA_949127965.1
Location: OX421850.1:26497234-26508470[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.047 3.1 9.1 2.4 3 20 182 199 180 203 0.91

2 11 2.1 1.4e+02 3.9 0.4 3 23 244 264 244 264 0.94

3 11 0.01 0.65 11.2 0.1 2 21 369 388 368 389 0.93

4 11 0.00029 0.019 16.1 0.5 1 23 397 420 397 420 0.96

5 11 2.8e-05 0.0018 19.3 5.0 1 23 441 463 441 463 0.98

6 11 9.4e-06 0.00061 20.7 4.2 1 23 470 492 470 492 0.98

7 11 1.5e-07 9.9e-06 26.4 2.3 3 23 506 526 504 526 0.96

8 11 3.5e-05 0.0023 18.9 3.2 1 23 532 554 532 554 0.99

9 11 2.5e-06 0.00016 22.6 1.7 2 23 561 582 560 582 0.96

10 11 2.4e-07 1.6e-05 25.7 1.4 1 23 588 610 588 610 0.99

11 11 0.0055 0.35 12.0 0.5 1 23 616 638 616 638 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.047	3.1	9.1	2.4	3	20	182	199	180	203	0.91
2	11	2.1	1.4e+02	3.9	0.4	3	23	244	264	244	264	0.94
3	11	0.01	0.65	11.2	0.1	2	21	369	388	368	389	0.93
4	11	0.00029	0.019	16.1	0.5	1	23	397	420	397	420	0.96
5	11	2.8e-05	0.0018	19.3	5.0	1	23	441	463	441	463	0.98
6	11	9.4e-06	0.00061	20.7	4.2	1	23	470	492	470	492	0.98
7	11	1.5e-07	9.9e-06	26.4	2.3	3	23	506	526	504	526	0.96
8	11	3.5e-05	0.0023	18.9	3.2	1	23	532	554	532	554	0.99
9	11	2.5e-06	0.00016	22.6	1.7	2	23	561	582	560	582	0.96
10	11	2.4e-07	1.6e-05	25.7	1.4	1	23	588	610	588	610	0.99
11	11	0.0055	0.35	12.0	0.5	1	23	616	638	616	638	0.98

Sequence Information

Coding Sequence: ATGGCTTCGTGTTTGAGTGttcaaaagttaataaaaatagaaaatttatGTCGGACTTGTTTGTCTAAGGAAACCATAATGTATTCCGTGTTTGATGTGTACTTGGAAACATTTAAATTAGATTACGTTCTAAGTGAAGTAACGGGACtaaagATTCAGCGAGATGATGGTTTGCCATCAAAAATATGCCAGGATTGCAAGGAAAGAGCTGTCAATGCATTTAATTATAAGACTAAGTCACATGAAGCACATGCTGCTCTTGAAGATTTATACAATAAGAGTAATTTAGAGaCATTAACAGATAGTATCAAAGTTGAGCAGACTGCTGCCGATGACAATGAGGATTGCTTGGAAATCGATTTTTCTATGGCAGTCACACCAGAAAACTATAGGGAATTGGATACTATAAAAAACGAGACTGAGGGTGATTTGGGCCAACAGTCTAAAAACTGCTGCTTAGAGTTTAAATCAATTACTAAACTGGAAgagcatttacaaaaaaaatgtgtgaaaGTGGAGTATGAAGATGAACATGGTACATTTTGCCCGCTTTGTGGAACATGTCATGAGAATGCTGATAATTTAACAAAGCATATGTGGACTAATCATGCTGATTTCATGGGCCCAAAGAAGAGAGGCAGACCAAAAAAGATACTAACTAGTACAATATTAAGTAAATTATCAGAAAATGGCTACCACATGAAAACTGAGCCTATTAAAGCAAAAGGCTGCCTATTCTGTAAGGATGAATTTAAGACTAAGTTAGAATTAGGAATTCATATGTTGGAGCACAAAGgtaCAAAGATTCTCTGTTGCGTGCTGTGTAAAAAGATGTATCTTAATATTATGCATTTTGAGCAACATGTTTGCACTGGGACAGATAATTCTGATAAAATGTTGCCTCAAGACACAACTTTAAGTATTGAAACCAGGAGCAAACAAGTTGGCTATCTCACAGAAGTGCTACTACAAGATTTGCTGGATCCAAATGGTGATATGgaGAATATTAATGTTCCTGAAGTTTGCAGTATGTGCAGTGAAGTATTTTTATCAGAAGAAGATATTGTGACTCACAATGATGCTGAACACCCGGAACTTTCACTACGTTGTAACCTCTGTTCCAAGGTATTTGCGACACTAAAATCAGCTGCTCGTCATAGAAACATATGTAAGCAAATAGAAAGAAAATTTATATGCAGTACTTGTGGCCTCAAATTTGCttatgaaatatcattaaataagCACATATTGAGATTTCACGAGGGTCAGAGCGTGTCGGTTAAGTTCATGGACCCTAAAACGAAATTAGACGAAAGGCAGTATCAATGTGATACCTGTAACAGATGTTTTTACAGGAAAGATTTACTCGCTAGACATACGAAACAACATATGCCGAGTGAAAAACTTTTTGAATGCGATGTGTGCAAGAAAAAATTCCATAGGAGGGATAATCTACGGTCTCACACGCGTGTACATGAGATCCATCGCGATAAAAGTGCTAGCAACAACTGCTTGTGCCTGTATTGCGGTCGAAGTTTCTCGAATTCGTCGAATCTCATAGTTCACATGCGCCGCCACACGGGAGAGAAACCCTATAAATGTGATTTTTGTGGCAAAgGGTTCCCGAGGTCGTCAGATTTACAGTGTCACAGGCGGTCACACACTGGGGAAAAACCCTGTATTTGTGTTGTTTGCGGGAAAGGTTTCTCTCGCAGCAACAAGCTGTCGCGGCATATGCGCGTGCACACCGGTCACAAACCGTACAGGTGCACTTATTGCGAAAAGGCGTTTTCGCAGAGCAACGACCTCACTCTCCACATCCGACGGCACACGGGTGACAAACCTTATGTTTGTGAAGTATGCGGCGATAGATTTATTCAGGGGACTTCATTACACAATCACCGGCGCGCGCACGGCCACTTCCCGGCCTCCTCTTCCGATACCCACTCAAATGTCCAAGGGCTGTCATATACTTCTATTGCACCTCACAGTTAA
Protein Sequence: MASCLSVQKLIKIENLCRTCLSKETIMYSVFDVYLETFKLDYVLSEVTGLKIQRDDGLPSKICQDCKERAVNAFNYKTKSHEAHAALEDLYNKSNLETLTDSIKVEQTAADDNEDCLEIDFSMAVTPENYRELDTIKNETEGDLGQQSKNCCLEFKSITKLEEHLQKKCVKVEYEDEHGTFCPLCGTCHENADNLTKHMWTNHADFMGPKKRGRPKKILTSTILSKLSENGYHMKTEPIKAKGCLFCKDEFKTKLELGIHMLEHKGTKILCCVLCKKMYLNIMHFEQHVCTGTDNSDKMLPQDTTLSIETRSKQVGYLTEVLLQDLLDPNGDMENINVPEVCSMCSEVFLSEEDIVTHNDAEHPELSLRCNLCSKVFATLKSAARHRNICKQIERKFICSTCGLKFAYEISLNKHILRFHEGQSVSVKFMDPKTKLDERQYQCDTCNRCFYRKDLLARHTKQHMPSEKLFECDVCKKKFHRRDNLRSHTRVHEIHRDKSASNNCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICVVCGKGFSRSNKLSRHMRVHTGHKPYRCTYCEKAFSQSNDLTLHIRRHTGDKPYVCEVCGDRFIQGTSLHNHRRAHGHFPASSSDTHSNVQGLSYTSIAPHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00342456;
90% Identity: iTF_01136058;
80% Identity: -