Phep024501.1
Basic Information
- Insect
- Pandemis heparana
- Gene Symbol
- ZFX
- Assembly
- GCA_963854515.1
- Location
- OY978032.1:621619-627219[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.3 20 6.6 1.4 2 20 117 135 116 137 0.73 2 22 0.018 1.2 10.5 0.6 2 23 168 190 167 190 0.94 3 22 0.0023 0.15 13.3 4.2 1 23 195 218 195 218 0.96 4 22 0.74 49 5.4 3.0 3 21 223 241 222 242 0.92 5 22 4.4e-05 0.0029 18.7 0.3 1 23 253 276 253 276 0.95 6 22 4.3e-05 0.0028 18.7 4.1 1 23 283 305 283 305 0.98 7 22 0.002 0.13 13.5 0.4 1 23 312 334 312 334 0.98 8 22 0.00017 0.011 16.8 0.2 2 21 452 471 451 472 0.94 9 22 0.01 0.66 11.3 2.8 3 23 505 525 504 526 0.95 10 22 0.0019 0.13 13.5 0.1 3 23 533 553 531 553 0.96 11 22 8 5.2e+02 2.1 8.0 1 22 556 577 556 577 0.94 12 22 0.0013 0.089 14.0 0.3 1 23 589 612 589 612 0.95 13 22 0.00045 0.03 15.5 0.5 1 23 618 640 618 640 0.96 14 22 6.5 4.3e+02 2.4 0.3 1 23 674 697 674 697 0.74 15 22 0.00044 0.029 15.5 3.0 2 21 824 843 823 844 0.92 16 22 0.0089 0.59 11.4 0.9 2 23 905 926 904 926 0.96 17 22 1.1 74 4.8 1.5 2 21 930 949 930 950 0.91 18 22 1.4e-05 0.00095 20.2 1.1 1 23 976 999 976 999 0.95 19 22 0.00048 0.032 15.4 0.4 1 23 1005 1027 1005 1027 0.95 20 22 1.6 1e+02 4.4 0.1 3 23 1035 1055 1033 1055 0.97 21 22 0.15 9.9 7.6 1.9 1 23 1061 1084 1061 1084 0.94 22 22 0.0051 0.34 12.2 1.4 2 23 1091 1113 1090 1113 0.95
Sequence Information
- Coding Sequence
- ATGGAGAACTCGCCTCTGCTGCCGAACAGGATATGCGGGGGCTGCGCCGCCGGCCTTAATCCCACCATCCGCTTCATCGAATACCTCAAAGATGCTCACCAAAAATGGAGAGATGTGGCCGATCATATAGACCAGATAGAAGTGAAGGGCAATGTCAAAATAGCGTACGTAGTCCTCGATCGCGAAGCCAAAGAATGCACCACGTACACAGAGAACGTACGGCGCGACATTACGGACATGTCTGAGGTGTTCAAAAGTTTCAAAAAGAGAAAGTCGCAACAGAACGCTGTTAGAAGAAGGCACGAGTTGGAGAGGAAGCTTCGGGATTCAGAGATATCGACTAGTTTGAAATGTCCAGAATGCGACAAGAGTTTTCTTTGCGTGTACAAGTTCAACGCGCATATGAGGTATTACGATAAACGGGCGTGTGTTCACTGCAGGCAGATGGTTAATGTTGATGACTTGAAGGTGCATTACGAAGGGCATGGGGCTGATACTATGCAGTGCGACATTTGCTTCGACACTTTTAGGAATAGAGATATGTTGGTGAAACATAAGGCTATGTATCACAGTAAAGGCCCGTATTTCTGTTACATATGCAAGCTTTCGTATCGCGATCCGCACCATCTAGCCTCGCATATGACCAGCAAACACGAGCCCAGGATCTGCCTCGGTTGTAATAGAAAATTCTCGAACGGTTATTGCTTCCGTACGCATAAGAATAAATGCAGCAACGCTAGAAGGAAAGGCGGCATATTCGTTTGTGATATATGCTCGAAGATGTATAGCTCGAAATACGCGCTCAAAGTGCATTTGGAGTATATACATATGAATAAAGAGCACTCGCATCAGTGCGAACATTGTGGCAAGGTTTTTAACAGTGCTATGCATCTGTGGGAGCATAGCAACACGCATAACCGAGTGCCTGATAGATTTGTTTGTAGTGTATGTGGCATGCCTATGAGTACTAGGCGAGGGTACCAGAGGCATATAAAGCGTCATATGAAAAATCCTAACTATGAGCCGAGGAGGCCTAGGGTCGAGGAAGATGCTGTACTGCCTCGAGGAGTGTGCCGAGCCTGCGCCGAGGACTCCATAGCAGCCACCAAGTTCAGACAGCTCGGGCTCTCCTCCCAACAGCACTGGGACCAAGCTGTCGCCACCCTCGCACAAATACAGGACCCCGAAGACCCGAACGTCACCATATACGTTCACTACAACGGTTCACACAGCATAATAAGAGAGGAGCCCGGAAAGTTGACTAACACAGACGATGTCGTCGATAGGCTGAATATGAAACCACAAAAGCGGGCCAAAGCGAAAAGGGCGTACAAGAGACCGGCGCAGATTTGTCGCTGCCCTGATTGTGGCAAAGATTTTCCGGTGGCGTACAGTTTGAACGTGCATTTGAAGAATACGATGAAGCGCGCGTGCGTGAGGTGCGGTGAGGTCATGGAAAGGGAAAAGCTGGCTGATCATTTAGCTAAAGTGCATCAGAAACTCTTCGTTGATTGCGACATATGCTTCAAACTCTTTGAGAGCGAAGATAGTCTAAAGCACCATTATGCCACGCATCACAGCAGGTTCTCCTTCGGATGCCAGATTTGCGGAAGAGGATACACCAACGACAGAGCGTTGCGCGCTCATATGTACGCCCACACACTGTTCCACTGCATGTCCTGCAACCTCAGTTTCGAGAATCGGAGATGCTACAAGCATCATCAGAAGAAATGCAAGTCGGCGAAGCAAGCAACCACGTCGCTGTACACTTGCGATTATTGCGGCAATGCGTACGATAAAAAACCTTCGCTTCGCATCCATATAATACAAAAGCATCTGAACGTACTGCCGTACGTGTGCGTTACGTGTGGCAAGAGAACTTCAACGTTAGCACATTTGAGATCGCACGAGGCTATACACACTACGCAACGGAAGTTGTACAAGTGTGCGTGTGGGGCCGAGATGAGGACCGAATTGGGATATCATTTGCATCAGCGTATACATACTGGAGAGAAACCTTATGAATGCGAGGAATGCGGTGACAGGTTCCTTTCTGCGTCGAGGCGGTTGGATCACGTCAAGAGACGCCATAGGAGCACTAAAGACATGCCGCATGGCTGTGAGATGTGTCACGCGCGGTTTATATCGGATGAATCGCTTTGCCCCAACGGCGTTTGCGCGAGCTGCGCCACCAGCGCTATAGCAGCTCAAGAATTCAAGTCTCTCGTCACAGACTCCTGCAAAATGTGGTCCTACGCCGTCGACCAACTATCCACTATACCAATAAACGATTCGCCTAACGTGAAATCCCTTTGCGCATTCCTAAAACCCGACGATTTCAACATACAGATATCTAAAGATTTCTCCTGCAATGACAAAACTACTCCCCTAATCAGGTTAAAAACTAGGATCAATAGGAAGAAAAGCGAGGAGAGAAGACCAAGAGTCCACAGGACGGGGCCACCTTGCAAATGCACAGATTGCGGAAAGCATTTTATAAGCCCGTATTACTTGAATGTGCATTTCAAAAATAGCGGACAGAAAGACTCTTGTATCACTTGTGGCGCTATTATGTTGCGTGGGAGACAGATGAGAGATCATTTGGTGAAAGTGCATAGGGAAACTGCATTTTTGTGCAGCCAATGTCCAGCTATACATACAAATGAAATAGACGCCAAAAGACACGAGAAGAAGGCACACAAAAACGGTCTGACTTGCGTCGATTGTGGGCGCACGTTTTTAAGGCAGACGTCTTTTGAAACTCATTCGCAAATGCATGCGGTTAGGACGTGTAGGGCGTGCGGTATTCAGTTCACGAATCGTGCTTGTTATAGGGAACATAGGTCTAAATGCGAGCCGGACGCGAAACCGGATAGGGATACGGTGCCGCGTAACAGGCGTTCCAACATACGCGATCCGGCTACGTTTACTTgtgattattgcaaaaaaaCTTATCGATCGCGGCCTCAGTTGAAAAATCATATACTTTGGATACATATGGACGTCAGACCGCACCAGTGTTCGTGGTGTGGCAAACGGTTTTACACCCCCGCCCGGTTGGCCGAGCACACTGTGGTCCATACGCGGGAAAGGAACTTCGGTTGTGACATTTGTGGCGCGAAACttgtttccaagatggcggcggTTTACCACAGACGGCGTCACACCGGCGAGAAACCTTATAAGTGCGAGGACTGTGGCGATTGCTTCATTTCAGCCTCTAGAAGGTCAGAGCACGCGAAACGGAAGCACGGCAAAGGTCCTAGATTGCAATGCACTCAGTGCTCTTCTAGTTTTGTTAGGGTGCACGAATTGAAAAGACATGTAGAAAAGGCGcacattaatataaaaataagcaATGTCATGTCTGCAGATGTCATATCTTTGTTGGATGAGTGA
- Protein Sequence
- MENSPLLPNRICGGCAAGLNPTIRFIEYLKDAHQKWRDVADHIDQIEVKGNVKIAYVVLDREAKECTTYTENVRRDITDMSEVFKSFKKRKSQQNAVRRRHELERKLRDSEISTSLKCPECDKSFLCVYKFNAHMRYYDKRACVHCRQMVNVDDLKVHYEGHGADTMQCDICFDTFRNRDMLVKHKAMYHSKGPYFCYICKLSYRDPHHLASHMTSKHEPRICLGCNRKFSNGYCFRTHKNKCSNARRKGGIFVCDICSKMYSSKYALKVHLEYIHMNKEHSHQCEHCGKVFNSAMHLWEHSNTHNRVPDRFVCSVCGMPMSTRRGYQRHIKRHMKNPNYEPRRPRVEEDAVLPRGVCRACAEDSIAATKFRQLGLSSQQHWDQAVATLAQIQDPEDPNVTIYVHYNGSHSIIREEPGKLTNTDDVVDRLNMKPQKRAKAKRAYKRPAQICRCPDCGKDFPVAYSLNVHLKNTMKRACVRCGEVMEREKLADHLAKVHQKLFVDCDICFKLFESEDSLKHHYATHHSRFSFGCQICGRGYTNDRALRAHMYAHTLFHCMSCNLSFENRRCYKHHQKKCKSAKQATTSLYTCDYCGNAYDKKPSLRIHIIQKHLNVLPYVCVTCGKRTSTLAHLRSHEAIHTTQRKLYKCACGAEMRTELGYHLHQRIHTGEKPYECEECGDRFLSASRRLDHVKRRHRSTKDMPHGCEMCHARFISDESLCPNGVCASCATSAIAAQEFKSLVTDSCKMWSYAVDQLSTIPINDSPNVKSLCAFLKPDDFNIQISKDFSCNDKTTPLIRLKTRINRKKSEERRPRVHRTGPPCKCTDCGKHFISPYYLNVHFKNSGQKDSCITCGAIMLRGRQMRDHLVKVHRETAFLCSQCPAIHTNEIDAKRHEKKAHKNGLTCVDCGRTFLRQTSFETHSQMHAVRTCRACGIQFTNRACYREHRSKCEPDAKPDRDTVPRNRRSNIRDPATFTCDYCKKTYRSRPQLKNHILWIHMDVRPHQCSWCGKRFYTPARLAEHTVVHTRERNFGCDICGAKLVSKMAAVYHRRRHTGEKPYKCEDCGDCFISASRRSEHAKRKHGKGPRLQCTQCSSSFVRVHELKRHVEKAHINIKISNVMSADVISLLDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01135041;
- 90% Identity
- iTF_01135041;
- 80% Identity
- -