Basic Information

Insect: Pandemis corylana
Gene Symbol: ZFX_1
Assembly: GCA_949127965.1
Location: OX421875.1:428422-434171[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.29 19 6.6 1.4 2 20 117 135 116 137 0.73

2 22 0.048 3.1 9.1 0.6 2 23 168 190 167 190 0.94

3 22 0.0022 0.15 13.3 4.2 1 23 195 218 195 218 0.96

4 22 0.39 25 6.2 2.9 3 21 223 241 222 242 0.93

5 22 4.2e-05 0.0027 18.7 0.3 1 23 253 276 253 276 0.95

6 22 4.1e-05 0.0027 18.7 4.1 1 23 283 305 283 305 0.98

7 22 0.00059 0.038 15.1 0.6 1 23 312 334 312 334 0.98

8 22 2.7e-05 0.0017 19.3 0.0 1 21 451 471 451 472 0.96

9 22 0.011 0.71 11.1 0.7 3 23 505 525 503 526 0.94

10 22 0.0019 0.12 13.5 0.1 3 23 533 553 531 553 0.96

11 22 6.6 4.3e+02 2.3 7.9 1 22 556 577 556 577 0.94

12 22 0.00079 0.051 14.7 0.3 1 23 589 612 589 612 0.95

13 22 0.00012 0.008 17.2 0.6 1 23 618 640 618 640 0.96

14 22 6.3 4.1e+02 2.4 0.3 1 23 674 697 674 697 0.74

15 22 0.00028 0.018 16.1 1.7 2 21 824 843 823 844 0.92

16 22 0.0086 0.55 11.4 0.9 2 23 905 926 904 926 0.96

17 22 1.1 70 4.8 1.5 2 21 930 949 930 950 0.91

18 22 1.4e-05 0.0009 20.2 1.1 1 23 976 999 976 999 0.95

19 22 0.00046 0.03 15.4 0.4 1 23 1005 1027 1005 1027 0.95

20 22 1.5 98 4.4 0.1 3 23 1035 1055 1033 1055 0.97

21 22 0.14 9.3 7.6 1.9 1 23 1061 1084 1061 1084 0.94

22 22 0.039 2.5 9.3 3.0 2 23 1091 1113 1090 1113 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.29	19	6.6	1.4	2	20	117	135	116	137	0.73
2	22	0.048	3.1	9.1	0.6	2	23	168	190	167	190	0.94
3	22	0.0022	0.15	13.3	4.2	1	23	195	218	195	218	0.96
4	22	0.39	25	6.2	2.9	3	21	223	241	222	242	0.93
5	22	4.2e-05	0.0027	18.7	0.3	1	23	253	276	253	276	0.95
6	22	4.1e-05	0.0027	18.7	4.1	1	23	283	305	283	305	0.98
7	22	0.00059	0.038	15.1	0.6	1	23	312	334	312	334	0.98
8	22	2.7e-05	0.0017	19.3	0.0	1	21	451	471	451	472	0.96
9	22	0.011	0.71	11.1	0.7	3	23	505	525	503	526	0.94
10	22	0.0019	0.12	13.5	0.1	3	23	533	553	531	553	0.96
11	22	6.6	4.3e+02	2.3	7.9	1	22	556	577	556	577	0.94
12	22	0.00079	0.051	14.7	0.3	1	23	589	612	589	612	0.95
13	22	0.00012	0.008	17.2	0.6	1	23	618	640	618	640	0.96
14	22	6.3	4.1e+02	2.4	0.3	1	23	674	697	674	697	0.74
15	22	0.00028	0.018	16.1	1.7	2	21	824	843	823	844	0.92
16	22	0.0086	0.55	11.4	0.9	2	23	905	926	904	926	0.96
17	22	1.1	70	4.8	1.5	2	21	930	949	930	950	0.91
18	22	1.4e-05	0.0009	20.2	1.1	1	23	976	999	976	999	0.95
19	22	0.00046	0.03	15.4	0.4	1	23	1005	1027	1005	1027	0.95
20	22	1.5	98	4.4	0.1	3	23	1035	1055	1033	1055	0.97
21	22	0.14	9.3	7.6	1.9	1	23	1061	1084	1061	1084	0.94
22	22	0.039	2.5	9.3	3.0	2	23	1091	1113	1090	1113	0.94

Sequence Information

Coding Sequence: ATGGAGAACTCGCCTCTGCTGCCGAACAGGATATGCGGGGGCTGCTCCGCCGGCCTTAACCCCACCATCCGCTTCATAGAATACCTCAGAGACGCTCACAGAAAATGGAGAGATGTGGCCGATCATATAGACCAGATAGAAGTGAAGGATAATGTCAAAATTGCCTACGTAGTCCTCGATCGCGAAGCCAAAGAGTGCACCACGTACACCGAAAATGTACGACGCGACATCACGGACATGGCTGAGGTGttcaaaagttttaaaaagcGAAAGTCGCAACAGAACGCCGTTAGAAGAAGGCACGAGTTGGAAAGGAAGCTTCGTGATTCAGAGATATCGACTAGTTTGAAATGTCCTGAATGCGACAAGAGTTTCCTTTGTGTGTACAAGTTTAACGCGCATATGAGGTATTACGATAAACGGGCGTGTGTTCACTGCAGGCAGATGGTCAAAGTTGAAGACTTGAAGGTACATTACGAAGAGCATGGGACTGATACTATGCAGTGCGATGTTTGCTTCGACACTTTTAGGAATAGAGAGATGTTGGTGAAGCACAAAGCTATGTATCACAGTAAAGGCCCGTATTTCTGTTACATATGCAAGCTTTCGTATCGCGATCCGCACCATCTAGCCTCTCATATGACCAGCAAACACGAACCTAGGATCTGCCTCGGTTGTAATAGAAAATTCTCGAACGGTTACTGCTTCCGTACGCATAGGAATAAATGCAGCAACGCTAGAAGGAAAGGCGGCATATTCGTCTGTGACATATGCTCCAAGATGTATAGCTCAAAATACGCGCTCAAAGTTCATTTGGAGTATATACATATGAATAAAGAGCATTCGCACCAGTGTGAGCATTGTGGCAAGGTTTTTAACAGTGCCATGCATCTGTGGGAGCATAGCAACACGCATAACAGAGTGCCTGACAGATTTGTTTGTAACGTGTGTGGCATGCCCATGAGTACTAGAAGAGGGTACCAAAGGCATATGAAGAGGCATATTAAGAATCCTGAGTATGAGCCGAGGAGACCTAAGGTCGAGGAAGACGCGGTACTGCCTCGTGGAGTGTGCCGAGCCTGCGCCGAGGACTCCATAGCAGCGACCAAGTTCAGACAGCTCGGCCTCTCCTCCCAACAGCATTGGGACCAAGCCGTCGCCACCTTCGCACAAATACAGGACCCTGAAGACACCAACGTCACCCTCTACGTTCACTACAGCGGTTCACACAGTATAATCAGAGAGGAGCCCGGAAAATTGACTAACACAGATGATGTCGTCGATAGACTGAATATGAAACCTCAAAAAAGGGCCAAAGTCAGAAGGGCTTACAAGAAATCAGCGCAGAAGTTTCGCTGCCCTGATTGTGGTAAAGAGTTTCCGGTGGCGTACAGTTTGAACGTACATTTGAAGAATACGATGAAGCGGGCGTGCGTGAGGTGCGGCGAGGTCATGGACAGGGACAAACTAGCTGATCATTTAGCTAAAGTGCATGATAAACTCTACATTGATTGCGATATGTGCTTCAAACTTTTTGAGAGCGAAGATGGTCTGAAGAATCATTATGCTACGCATCACAGTAGATTCTCCTTCGGATGCCAGATTTGCGGAAGGGGATACACCAACGACAGAGCGTTACGCGCTCACATGTACGCCCACACACTGTTCCATTGCTTGTCTTGCAATCTCAGCTTCGAGAATCGGAGATGCTACAAGCATCACCAGAAGAAATGCAAGTCGGCGAAACAAGCAACCGCGTCGCTGTACACTTGCGATTATTGCGGTAATGTGTACGATAAAAAACCTTCGCTCCGCATCCATATAATACAGAAGCATCTTAACGTACTGCCTTACGTTTGCGATACGTGTGGCAAGAGAACTTCAACGCTAGCACATTTGAGATCGCACGAGGCTATACACACCACGGAACGGAAGTTGTACAAGTGTGCGTGCGGGGCCGAGATGAGGACCGAATTGGGATACCATTTGCACCAGCGTATACATACCGGAGAGAAGCCGTATGAATGCGAGGAATGCGGTGACAGATTCCTCTCTGCATCGAGACGGTTGGATCACGTCAAGAGACGCCATAGGAGCACTAAAGACATGCCGCATGGCTGTGAGATGTGTCACGCGCGGTTTATATCTGACGAATCGCTCTGCCCCAACGGCGTTTGCGCGGGCTGCGCCACCAGCGCCATAGCAGCTCAAGAGTTCAGGTCTCTCGTCACAGACTCCTGCAAGATGTGGTCGTATGCCGTCGATCAGCTATCCACTATACCTATAAATGATTCGCCTAACGTTAAATCCCTCTGCGCCTTCCTAAAACCAGACGACTTCAACATTCAAATAGCTAAAGATTTCTCCTGCAATGACAAGACTACTCCCCTAATCAGATTGAAAACTAGGATCAATAGGAAAAAAAGCGAGGAAAGAAGACCAAGAGTGCACAGGACAGGGCCACCTTGCAAATGCACGGATTGCGGCAAGCAATTTATAAGCCCATATTACTTGAATGTGCATTTCAAAAATAGCGGTCAGAAAGACTCTTGCATCACTTGTGGTGCTATTGTGTTGCGTGGGAAACAGATGAGAGATCATTTGGTGAAAGTGCATAGGGAAACTGCTTTTTTGTGCAGCGAATGTCCAGCTATCCATACTAATGAAATAGACGCCAAAAGACACGAGAAGAAAGCGCATAAGAACGGTCTGACTTGCGTCGATTGTGGGCGCACGTTTTTAAGGCAGACGTCTTTTGAAACTCACTCGCAAATGCATGCGGTTAGGACGTGTAGGGCATGCGGCATACAGTTCACGAACCGTGCTTGTTATAGGGAACATAGGTCTAAGTGTGAACCGGATGCGAAACCGGATCGGGACACGGTGCCGCGTAACAGGCGTTCCAACATACGCGATCCGGCTACGTTCACTTGTGATTATTGCAAAAAAACCTATCGGTCGCGACCTCAGTTGAAAAATCATATTCTTTGGATACATATGGACGTTAGACCGCACCAGTGTTCGTGGTGTGGCAAACGGTTTTACACCCCCGCCCGTTTGGCTGAACACACTGTGGTCCATACGCGGGAGAGGAACTTCGGTTGTGACATTTGTGGCGCGAAACtcgtttccaagatggcggcggtTTACCACAGACGGCGGCACACCGGCGAGAAACCTTATAAATGCGAGGACTGTGGCGATTGCTTCATTTCAGCCTCTAGGAGGTCGGAGCACGCGAAAAGAAAGCATGGCAAAGGTCCAAGGTTGCACTGCACTCAGTGCTCCTCTAGTTTTGTGAGGGTGCACGAATTGAAAAGGCATGTAGAAAAGGCGcacattaatataaaaataagcaatgtCATGTCTGCTGATGTCATATCTTTGTTGGATGAGTGA
Protein Sequence: MENSPLLPNRICGGCSAGLNPTIRFIEYLRDAHRKWRDVADHIDQIEVKDNVKIAYVVLDREAKECTTYTENVRRDITDMAEVFKSFKKRKSQQNAVRRRHELERKLRDSEISTSLKCPECDKSFLCVYKFNAHMRYYDKRACVHCRQMVKVEDLKVHYEEHGTDTMQCDVCFDTFRNREMLVKHKAMYHSKGPYFCYICKLSYRDPHHLASHMTSKHEPRICLGCNRKFSNGYCFRTHRNKCSNARRKGGIFVCDICSKMYSSKYALKVHLEYIHMNKEHSHQCEHCGKVFNSAMHLWEHSNTHNRVPDRFVCNVCGMPMSTRRGYQRHMKRHIKNPEYEPRRPKVEEDAVLPRGVCRACAEDSIAATKFRQLGLSSQQHWDQAVATFAQIQDPEDTNVTLYVHYSGSHSIIREEPGKLTNTDDVVDRLNMKPQKRAKVRRAYKKSAQKFRCPDCGKEFPVAYSLNVHLKNTMKRACVRCGEVMDRDKLADHLAKVHDKLYIDCDMCFKLFESEDGLKNHYATHHSRFSFGCQICGRGYTNDRALRAHMYAHTLFHCLSCNLSFENRRCYKHHQKKCKSAKQATASLYTCDYCGNVYDKKPSLRIHIIQKHLNVLPYVCDTCGKRTSTLAHLRSHEAIHTTERKLYKCACGAEMRTELGYHLHQRIHTGEKPYECEECGDRFLSASRRLDHVKRRHRSTKDMPHGCEMCHARFISDESLCPNGVCAGCATSAIAAQEFRSLVTDSCKMWSYAVDQLSTIPINDSPNVKSLCAFLKPDDFNIQIAKDFSCNDKTTPLIRLKTRINRKKSEERRPRVHRTGPPCKCTDCGKQFISPYYLNVHFKNSGQKDSCITCGAIVLRGKQMRDHLVKVHRETAFLCSECPAIHTNEIDAKRHEKKAHKNGLTCVDCGRTFLRQTSFETHSQMHAVRTCRACGIQFTNRACYREHRSKCEPDAKPDRDTVPRNRRSNIRDPATFTCDYCKKTYRSRPQLKNHILWIHMDVRPHQCSWCGKRFYTPARLAEHTVVHTRERNFGCDICGAKLVSKMAAVYHRRRHTGEKPYKCEDCGDCFISASRRSEHAKRKHGKGPRLHCTQCSSSFVRVHELKRHVEKAHINIKISNVMSADVISLLDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01136030;
90% Identity: iTF_01136030;
80% Identity: -