Basic Information

Insect: Pandemis heparana
Gene Symbol: -
Assembly: GCA_963854515.1
Location: OY978032.1:8871500-8874688[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.009 0.59 11.4 1.7 1 23 136 158 136 158 0.98

2 26 0.00074 0.049 14.8 5.8 1 23 167 189 167 189 0.98

3 26 2.6e-06 0.00017 22.5 1.3 1 23 195 217 195 217 0.98

4 26 2.4e-06 0.00016 22.6 0.9 1 23 223 245 223 245 0.98

5 26 0.0011 0.072 14.3 0.9 1 23 251 273 251 273 0.98

6 26 0.0079 0.52 11.6 2.3 1 23 279 301 279 301 0.98

7 26 5.5e-05 0.0036 18.4 3.1 1 23 307 329 307 329 0.98

8 26 2.2e-05 0.0015 19.6 3.1 1 23 335 357 335 357 0.97

9 26 2.4e-05 0.0016 19.5 5.7 1 23 363 385 363 385 0.98

10 26 2.2e-05 0.0015 19.6 3.1 1 23 391 413 391 413 0.97

11 26 0.00021 0.014 16.5 2.5 1 23 419 441 419 441 0.98

12 26 2.4e-05 0.0016 19.5 5.7 1 23 447 469 447 469 0.98

13 26 2.2e-05 0.0015 19.6 3.1 1 23 475 497 475 497 0.97

14 26 0.00021 0.014 16.5 2.5 1 23 503 525 503 525 0.98

15 26 4.4e-05 0.0029 18.7 4.4 1 23 531 553 531 553 0.98

16 26 0.0018 0.12 13.6 7.2 1 23 559 581 559 581 0.97

17 26 6.3e-05 0.0042 18.2 3.2 1 23 587 609 587 609 0.97

18 26 0.00018 0.012 16.8 2.1 1 23 615 637 615 637 0.98

19 26 2.4e-05 0.0016 19.5 4.0 1 23 643 665 643 665 0.98

20 26 7.8e-05 0.0052 17.9 4.9 1 23 671 693 671 693 0.98

21 26 2.4e-05 0.0016 19.5 5.7 1 23 699 721 699 721 0.98

22 26 0.0005 0.033 15.4 2.8 1 23 727 749 727 749 0.98

23 26 4.7e-05 0.0031 18.6 4.4 1 23 755 777 755 777 0.98

24 26 0.58 38 5.7 2.7 1 20 783 802 783 804 0.90

25 26 9.3 6.1e+02 1.9 1.6 2 23 806 828 805 828 0.90

26 26 0.00019 0.012 16.7 0.2 1 23 833 855 833 855 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.009	0.59	11.4	1.7	1	23	136	158	136	158	0.98
2	26	0.00074	0.049	14.8	5.8	1	23	167	189	167	189	0.98
3	26	2.6e-06	0.00017	22.5	1.3	1	23	195	217	195	217	0.98
4	26	2.4e-06	0.00016	22.6	0.9	1	23	223	245	223	245	0.98
5	26	0.0011	0.072	14.3	0.9	1	23	251	273	251	273	0.98
6	26	0.0079	0.52	11.6	2.3	1	23	279	301	279	301	0.98
7	26	5.5e-05	0.0036	18.4	3.1	1	23	307	329	307	329	0.98
8	26	2.2e-05	0.0015	19.6	3.1	1	23	335	357	335	357	0.97
9	26	2.4e-05	0.0016	19.5	5.7	1	23	363	385	363	385	0.98
10	26	2.2e-05	0.0015	19.6	3.1	1	23	391	413	391	413	0.97
11	26	0.00021	0.014	16.5	2.5	1	23	419	441	419	441	0.98
12	26	2.4e-05	0.0016	19.5	5.7	1	23	447	469	447	469	0.98
13	26	2.2e-05	0.0015	19.6	3.1	1	23	475	497	475	497	0.97
14	26	0.00021	0.014	16.5	2.5	1	23	503	525	503	525	0.98
15	26	4.4e-05	0.0029	18.7	4.4	1	23	531	553	531	553	0.98
16	26	0.0018	0.12	13.6	7.2	1	23	559	581	559	581	0.97
17	26	6.3e-05	0.0042	18.2	3.2	1	23	587	609	587	609	0.97
18	26	0.00018	0.012	16.8	2.1	1	23	615	637	615	637	0.98
19	26	2.4e-05	0.0016	19.5	4.0	1	23	643	665	643	665	0.98
20	26	7.8e-05	0.0052	17.9	4.9	1	23	671	693	671	693	0.98
21	26	2.4e-05	0.0016	19.5	5.7	1	23	699	721	699	721	0.98
22	26	0.0005	0.033	15.4	2.8	1	23	727	749	727	749	0.98
23	26	4.7e-05	0.0031	18.6	4.4	1	23	755	777	755	777	0.98
24	26	0.58	38	5.7	2.7	1	20	783	802	783	804	0.90
25	26	9.3	6.1e+02	1.9	1.6	2	23	806	828	805	828	0.90
26	26	0.00019	0.012	16.7	0.2	1	23	833	855	833	855	0.95

Sequence Information

Coding Sequence: ATGTCCTGTGTGGGGCGGGGCATGCAGCGCGCGGAGCTCGGGGTCAAGCAGGAGCCGCCGCAGTCGCCCGAAGACGCCGCGGCGTCGCCAGTTGACGGTGCAGAGCAGACCGTGGTGAAGCAAGAGTGCAGCGACGACACCAGCAACAGCTTGGAAGACTCCTGCGCCAGTAGTGAGTGTTCTGGAGAGTACCTCAAGGAGGAGCCAGCAGTTACTGGCGACTGCAATGAAGAGCTTCTTATGCTCATGCTCAGGCCTTGCTCTGTCCACCTGGATCGCACCCTAGTGGAGAAATACACCACAAGCACACTGTGTGCAACTTCAGAGCACAGATCACACAATAAGCCTCTTGAATCTTATAGTAAAAGGGTTAAAATAGGAAAAAATCACACTCAAGAGAAACTTTATAAATGCAACGTTTGTATGGCACAGTTCTCAAGTAAGTATTATTTGGCTTTGCACAAGAAGTCTCATGGCACCGACACACCAGGGATCTCTTACTGCTGCGGCACTTGCAACAAAAACTTTAAAGGCAAGCGTCATTTAGATATCCATATGCGCAGTCACCTGGGAAAGACTCCCTACAGCTGCGATGTCTGTCAGAAGCAGTTCTCGCAACGCGCGAACTTAAATAGCCATAAACGTGTTCATACGAGGCAGAAACCCTACAGCTGTGATGTCTGTCAGAAGCAGTTCTCGCAACGCGCGAACTTAAATATCCATAAACGTGTTCATACGAGGCAGAAACCCTACAGCTGTGATGTCTGTCAGAAGCAGTTCTCACTACGGTCGACTTTAGATGGTCATAAACGTATCCACACAGGGGAGAAGCCTTACTGCTGCGATGTCTGTCTGAAGCAGTTCTCACTACAATCGACCTTAGATGATCATAAACGTATCCACACAGGGGAGAAGTCTTACTGCTGTGATGTCTGTCTGAAGCAGTTCTCGCGAAGTTCGCAATTAAATATCCATAAACGTATCCACACAGGGGAGAAGCCTTACTGCTGCGATGTCTGTCAGAAGCAGTTCTCGTATAGCTCAAATTTAATTCGTCACAAACTCATCCACATGGGGCAGAAGTCTTACTGCTGTGATGTCTGTCAGAAGCAGTTCTCGCGAAGTTCGCACTTAAATATCCATAAACGTATCCACACAGGGGAGAAGCCTTACTGCTGTGATGTCTGTCAGAAGCAGTTCTCGTATAGCTCAAATTTAATTCGTCACAAACTCATCCACACGGGGCAGAAGTATTACTGCTGTGATGTCTGTCAGAAGCAGTTctcgggaagtacgcaattaaATATCCATAAACGTGTCCACACAGGGGAGAAGTCTTACTGCTGTGATGTCTGTCAGAAGCAGTTCTCGCGAAGTTCGCACTTAAATATCCATAAACGTATCCACACAGGGGAGAAGCCTTACTGCTGTGATGTCTGTCAGAAGCAGTTCTCGTATAGCTCAAATTTAATTCGTCACAAACTCATCCACACGGGGCAGAAGTCTTACTGCTGTGATGTCTGTCAGAAGCAGTTctcgggaagtacgcaattaaATATCCATAAACGTGTTCACACAGGGGAGAAGTCTTACTGCTGTGATGTCTGTCAGAAGCAGTTCTCGCAAAGTGCGCACTTAAATGTCCATAAACGTGTCCACACAGGGGAGAAGCCTTACTGCTGCGATGTCTGTCAGAAGCAGTTCTCGCGAAGTTGGCACTTAAATATCCATAAATGTATCCACACAGGGGAGAAGCCTTATTGTTGCGATGTCTGTCAAAAGCGATTCTCGCAAAGCGCCTACTTAAATATCCATAAACGTCTCCACACAGAAGAGAAGGCTTACTGCTGCGATGTCTGTCAGAAACAGTTCTCACAATGGTCGACCTTAGATGGTCATAAACGTATCCACATAGGGGAGAAGTCTTACTGCTGTGATGTCTGTCAGAAGCAGTTCTCGAAACGGTCAAACTTAAATATCCATAAACGTGTCCACACAGGGGAGAAGCCTTACTGCTGTGATGTCTGTCAGAAGCAGTTCTCGCGAAGTTGGCACTTAAATATCCATAAACGTGTCCACACAGGGGAGAAGCCTTACTGCTGTGATGTCTGTCAGAAGCAGTTCTCGCGAAGTTCGCACTTAAATATCCATAAACGTATCCACACAGGGGAGAAGCCTTACTGCTGTGATGTCTGTCGGAAGCAGTTctcgggaagtacgcaattaaATATCCATAAACGTGTCCACACAGGGGAGAAGTCTTACTGCTGCGATGTCTGTCAGAAGCAGTTCTCGCAAAGTGCGCACTTAAATGTCCATAAACGTATCCACACAGGGGAGAAGCCTTACTGCTGCGATGTGTGTCAGCTAAGATTTACTTATAAACATAAGATCGTAGCGCATTTTATGAGCATTTCTTGCGGAGTCTGTAGGCAACAATTTGCTTGCCGCACTTCTTTAAATATACATAAGCAAGACCAGCATGAGAGGAAATCCTTTTCTTGTGCTATTTGTAAGAAAGAGTTTGCTAATAAGAAACAGCTGATGGAGCACGTTGGGATCCACGTGTGGGTGCCGGAACGCGGCGCGCCGGGGACGGCCGGGGCTGAGGGGCGGCCGGggctgcgcggcggcgggggctgCGGGCCCTCCGGGGGCCATCGCACGCTCGAGGACCGGGATCCCGGGTCTCGAAAATACCGGGATACCGTATCATATTAA
Protein Sequence: MSCVGRGMQRAELGVKQEPPQSPEDAAASPVDGAEQTVVKQECSDDTSNSLEDSCASSECSGEYLKEEPAVTGDCNEELLMLMLRPCSVHLDRTLVEKYTTSTLCATSEHRSHNKPLESYSKRVKIGKNHTQEKLYKCNVCMAQFSSKYYLALHKKSHGTDTPGISYCCGTCNKNFKGKRHLDIHMRSHLGKTPYSCDVCQKQFSQRANLNSHKRVHTRQKPYSCDVCQKQFSQRANLNIHKRVHTRQKPYSCDVCQKQFSLRSTLDGHKRIHTGEKPYCCDVCLKQFSLQSTLDDHKRIHTGEKSYCCDVCLKQFSRSSQLNIHKRIHTGEKPYCCDVCQKQFSYSSNLIRHKLIHMGQKSYCCDVCQKQFSRSSHLNIHKRIHTGEKPYCCDVCQKQFSYSSNLIRHKLIHTGQKYYCCDVCQKQFSGSTQLNIHKRVHTGEKSYCCDVCQKQFSRSSHLNIHKRIHTGEKPYCCDVCQKQFSYSSNLIRHKLIHTGQKSYCCDVCQKQFSGSTQLNIHKRVHTGEKSYCCDVCQKQFSQSAHLNVHKRVHTGEKPYCCDVCQKQFSRSWHLNIHKCIHTGEKPYCCDVCQKRFSQSAYLNIHKRLHTEEKAYCCDVCQKQFSQWSTLDGHKRIHIGEKSYCCDVCQKQFSKRSNLNIHKRVHTGEKPYCCDVCQKQFSRSWHLNIHKRVHTGEKPYCCDVCQKQFSRSSHLNIHKRIHTGEKPYCCDVCRKQFSGSTQLNIHKRVHTGEKSYCCDVCQKQFSQSAHLNVHKRIHTGEKPYCCDVCQLRFTYKHKIVAHFMSISCGVCRQQFACRTSLNIHKQDQHERKSFSCAICKKEFANKKQLMEHVGIHVWVPERGAPGTAGAEGRPGLRGGGGCGPSGGHRTLEDRDPGSRKYRDTVSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01135979;
90% Identity: -
80% Identity: -