Phep025633.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pandemis heparana
Gene Symbol
-
Assembly
GCA_963854515.1
Location
OY978033.1:1676038-1678350[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.001 1.6 9.5 1.0 18 43 7 29 4 30 0.94
2 17 0.0023 3.6 8.4 0.0 18 43 66 88 64 89 0.93
3 17 0.00062 0.99 10.2 0.4 17 43 96 119 93 120 0.91
4 17 0.00023 0.36 11.6 0.4 18 44 127 150 125 150 0.92
5 17 1.8e-05 0.028 15.1 0.7 15 43 154 179 152 180 0.91
6 17 0.04 63 4.4 0.6 17 44 185 209 181 209 0.88
7 17 0.59 9.4e+02 0.7 0.3 19 43 239 260 234 261 0.77
8 17 3.6 5.8e+03 -1.8 0.2 19 43 292 313 289 314 0.69
9 17 8 1.3e+04 -2.9 1.8 17 25 320 328 303 343 0.56
10 17 0.061 96 3.8 0.0 17 44 349 373 344 373 0.76
11 17 0.023 36 5.2 1.3 12 43 392 420 387 421 0.85
12 17 0.064 1e+02 3.8 7.5 5 29 414 438 411 450 0.71
13 17 1.1 1.8e+03 -0.2 11.6 13 43 451 478 442 508 0.81
14 17 8.6 1.4e+04 -3.0 0.9 18 27 515 524 513 531 0.81
15 17 2.5 4e+03 -1.4 0.2 34 43 558 567 545 568 0.67
16 17 4.9 7.7e+03 -2.3 1.3 13 27 570 584 562 592 0.68
17 17 0.00082 1.3 9.8 2.2 6 43 597 633 595 634 0.78

Sequence Information

Coding Sequence
ATGGCCTCACCAGAATACGAGTGCGACTACTGCACACGCACATTCACAAGAAAATACAACTTGTCAACACACATTGAGAACTGCCACATAAACTCGACATGCTACTGCGACATATGCGACCAAAGGTTCGGCAGTCCAGCAGGATTGCAGCTCCATTTGAGCCGTGGCCATAACCGTTTTCAACAACCATACCCCGAATGCGATCTCTGTGGCCGTATATTCACGAGGAAGCAAAATGTAGTCTCTCATATGGTCACTGTCCACTACCAAGGTATTGGACCCCAGATACAGTGCAATATATGCTTTAAAACGTTCACGACTGAAAGGAATCTTAAACGGCACGTCAATCAGCTCCATAACCCTGATGTTGAATATCCTACATGTGACTATTGTAACAAAGTGTTCAAAGGAAAGCATTCTTTGATAGCCCATATACAAGCCACACACAATGTGCTGAAAGGTATTATCAAATGTGATCTGTGTGGCAAAGTTTATACGAACAACAGAAATCTGAAGAGGCATATTGAGATGTTTCACGGCGAGAAAGGTGAGTTTAGATGTGATCGCTGTCCTAAAGTGTACACGTCTAACCAGAGCTTGAGACGCCATGCTAGAACAAGACACAACACAGACGAATTCAACTATAAACCAGAAATAATAGAGATAGAAGACACGAATGATGCTGTTTACGATACACAAACTTTAGAGTTCCCTTGTTCGCACTGTGATAAGCATTTCGCTGAAGAACCTATGCTCCGACAGCACGTCAAGAACGAGCATTCATTCAAAATATTCTATGAATACTGCAGAAACTCTTTACTCAAACAAATGGCTGGTAAAACTGAAGAGAAAGCCGTTAAAGTTAACTATAACTGCGAGAATTGCAGTGCCGTTTTCACCACAGTTTACGAGTTAAAAGACCACATGAGAGCCAGTCATGACAAGGAGTACTCATTGAGTACATGCAATGTGTGCTTCATGAAGTTCTACAGCAAAGAAACCATGTCGGAGCATAAGAAGACTTGTCTACCGCCTCCCGACGTCAACGCTTGTAATTATTGTGATAAACTTTTTACTGATATATCGAGCTTGGAATTCCACGTTAGGATATTCCATCCTCAAGCACAGATAGCTGATAATGATGTGACATCGACTAATCTTGAAGACACGTCGATGGAAGCTGGCTCTTTTAAATGTGAGCTCTGCGACCGAATCTATTACAGTGACCGCTCACTCAAACACCATATCAAATTGAAGCATACGACGGACGAGGTAGTAGAGTGTGGTTTGTGTGGAAAGATCTGCAGCAACAAATACTATCTCGCGTCGCATATTAAGATAGTCCATAACAACGACTCTTGGTCGAAATGTGACTATTGCGACAAGCAGTTCAAGTCCAAAAGAAACATTAGGCGCCACATCGAATACACGCATTTGGGGAAGCAGAGATACAAGTGCATTGAATGCGAGACGCTTTTCAAAGAGAAGCGGAGTCTCCGTAAACATGTGAGAACTAAGCATCCCAATTCCACAATATTCCCTCAGTGTCATATTTGCTATAAGCGATTCGAGTCCGCTAAATcctgcaaaatacatctcaaactTTTGCACTCTTTCAACATGAACACGTACCCCTGCGATCTTTGCTCCGTCTCCTTCAGTTCCAACGAAGCTCTGAACATTCATTTACAGACTAAGCATCTAGCGGAAGACCAGATATTCAAATGCGAGCAATGCAACATAGTTTTCAATGGCCAAGACAAATTTGAGCAGCACAACGAAATATGTCATGTGAATTTGCTGCCGAACATAAAGCAGAAGGTGTTGCCGCGTTGCATCATTTGCATCAAAGATTTCAGCACCCGAAAGACCCTGAAACGTCACATCAAGAAGTTCCACGATGACTTTGACGCTGAAGAACTGGCGACGTACGGTTCTAAGAAGAGAATGTTCACCATAGAATGCGCTGAATGCATACAGAATTTCAACGACGACTTTTATTATGACGTGTATCAGAAATTGAAGCATTTGAAAGACTCTATAGTCTTCAAATGTGAGGGTTGTTCGTCGTCTTACGACTGTCTGGAATATTCTATCCAGAGATATAAGCTGATCAATTTGGAAGCGTGTAAGAGCAAGATGATATTGAGTGAATTGTGTACTGCTGAGATGAGTGACGGTGCTTCAAATAGTGGATTTGACATGGAGTTTATGGAACCAGAGAGTACCACAGGGGACATTAATGTCAAGATGGAACCTATGGAGTTTGATGCTGACGCGGATGCTGTCAAGGCCGAGCCTATGTCTCCGTAA
Protein Sequence
MASPEYECDYCTRTFTRKYNLSTHIENCHINSTCYCDICDQRFGSPAGLQLHLSRGHNRFQQPYPECDLCGRIFTRKQNVVSHMVTVHYQGIGPQIQCNICFKTFTTERNLKRHVNQLHNPDVEYPTCDYCNKVFKGKHSLIAHIQATHNVLKGIIKCDLCGKVYTNNRNLKRHIEMFHGEKGEFRCDRCPKVYTSNQSLRRHARTRHNTDEFNYKPEIIEIEDTNDAVYDTQTLEFPCSHCDKHFAEEPMLRQHVKNEHSFKIFYEYCRNSLLKQMAGKTEEKAVKVNYNCENCSAVFTTVYELKDHMRASHDKEYSLSTCNVCFMKFYSKETMSEHKKTCLPPPDVNACNYCDKLFTDISSLEFHVRIFHPQAQIADNDVTSTNLEDTSMEAGSFKCELCDRIYYSDRSLKHHIKLKHTTDEVVECGLCGKICSNKYYLASHIKIVHNNDSWSKCDYCDKQFKSKRNIRRHIEYTHLGKQRYKCIECETLFKEKRSLRKHVRTKHPNSTIFPQCHICYKRFESAKSCKIHLKLLHSFNMNTYPCDLCSVSFSSNEALNIHLQTKHLAEDQIFKCEQCNIVFNGQDKFEQHNEICHVNLLPNIKQKVLPRCIICIKDFSTRKTLKRHIKKFHDDFDAEELATYGSKKRMFTIECAECIQNFNDDFYYDVYQKLKHLKDSIVFKCEGCSSSYDCLEYSIQRYKLINLEACKSKMILSELCTAEMSDGASNSGFDMEFMEPESTTGDINVKMEPMEFDADADAVKAEPMSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00680825;
90% Identity
iTF_00462589;
80% Identity
iTF_01135987;