Phep025260.1
Basic Information
- Insect
- Pandemis heparana
- Gene Symbol
- -
- Assembly
- GCA_963854515.1
- Location
- OY978032.1:7473745-7484390[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-07 0.00016 22.1 0.1 10 39 202 232 201 235 0.89
Sequence Information
- Coding Sequence
- atGGATGTAGAAGACGGCAAATACTTTGGTATTTGCAAGTGTTGTCTTCGAGATGGTTGTTTTAGGAGTATGTGGGTTGAATATGAGGTGGATGGTGTCCTACAAAATTATGGCGATATGCTTAATGAATGCTTTGATTTGTGCTGGCATAAACCTGACAACAGTCATCTGGAGCAGATCTGTGACGCATGCGTGTCGCACACAAGGGACACCTACACGTTCCGTCGCCTCATTCTCAAGAGCCAAGACCGTTTGAACGGAGTGGTCCAGCAGAAGAATGATGTACTGGAAATAGAGTATCAGAAGGATACGGAAGTGATTTACGCTGAGGATGTCCCAGAAGATTTAATATCATTCATAGTGAAGGCCGAGGCAACCGAGGTAGATTCTGAAGACCATTCTCAAGATGAGAATCCCGAGTACTTGGAGGATGCCGAGCCAGAGGTCTTCGAGGAAGTGGAATACTTGGAGGTGGAGATTGAAGGTCAACCGCCGAACATAGATGAACACACAGAGCCAGCGTCACATACTAAGCCCAAGAGAAAGCGTGGCGAGAGGCGCGCGTACAAGCGCTACACCATGGACGACGTGCGCAGCGGCATGGCGGCCGTGCGGAGCGCCGCCATGAGCATGGCGGAAGCCGCCGCCGCCTACAACATACCGCGCAAGACGCTCGCCGCCAAGATACTCAGCGAGAAGCGCGGCGaGATACCAAAAATAGGGGGCAACGGCCGCTACGTGACCTTCATTAAGGAGGTACAGACGCTCCTCACGTACACGAACATGATCCCGTACAAGAGCAAGACTGCACACCTGCACTGCGCCTACTGCTCCACGATGGGGCCGCTGTTCGACGACGCCGACGAGCTGCGGAAGCACACGAGGACGCAGCACGCTGGCGAGAGAACAAAAAGCGTGGAACAGTTCCTGAGACCGCTATGGCTAAATGAAGTACTGAAAGTAGACATTGAAAACCTTCACTGCACTATCTGCTGTACGTACCTGCCATCCTGGAACGACATGTTCAAGCATCTCACAGAAGAACATAACCTGGAGTTCGATGAGGCCTACACCAGAGTTATCCCCTACATCCTGAGTACCGACTGGAGGTGTGCACTGTGCAAAGAGTCCTTCCCGAACTACCACCATTTGGACAGCCACATGAACGCTCATTACAGCAACTATATGTGCTCGGAATGTGGGGACACGTTCTTGGCTGAAACACGTCTGAAAAAACATGTGCAAATACACGATACAGGCAGATTCCAGTGCGAGGAGTGCGGGAAGACTTTTACACTAGAAAAGTACAGGACGAAGCATATCGAGTTAGTGCATAAACAGAATCAGAAGATCAGGTGTCTCTATTGCACAGAGAAGTTTCATGGGACCTATCCGAGGCATTTGCATGTGTTAGCGAAGCATAAAGATAAGATTAAGTTTATAACTTGTGAGTTGTGCGGGAAGACTTTTGATTGGAGGCCGTATTATTTGGCCCATATAAGGAGGAAACATGAGAACGAGAAGAAATATCAGTGCCAGTTTTGTGAGAAGCAGTTCTTCATGAAGTCTGAGGTTGTGAGGCATCAGATGGGCCATACGGGTGAGAAGTATAGTTGTGATGTGTGCGGGAAGAATTTTTCTAGTATGTGGGTGCTTAATGGGCATTATAGGACGCATGGGCAGGAGAGGGCTAGGCCTAGGTTGAAGAAGGATTGA
- Protein Sequence
- MDVEDGKYFGICKCCLRDGCFRSMWVEYEVDGVLQNYGDMLNECFDLCWHKPDNSHLEQICDACVSHTRDTYTFRRLILKSQDRLNGVVQQKNDVLEIEYQKDTEVIYAEDVPEDLISFIVKAEATEVDSEDHSQDENPEYLEDAEPEVFEEVEYLEVEIEGQPPNIDEHTEPASHTKPKRKRGERRAYKRYTMDDVRSGMAAVRSAAMSMAEAAAAYNIPRKTLAAKILSEKRGEIPKIGGNGRYVTFIKEVQTLLTYTNMIPYKSKTAHLHCAYCSTMGPLFDDADELRKHTRTQHAGERTKSVEQFLRPLWLNEVLKVDIENLHCTICCTYLPSWNDMFKHLTEEHNLEFDEAYTRVIPYILSTDWRCALCKESFPNYHHLDSHMNAHYSNYMCSECGDTFLAETRLKKHVQIHDTGRFQCEECGKTFTLEKYRTKHIELVHKQNQKIRCLYCTEKFHGTYPRHLHVLAKHKDKIKFITCELCGKTFDWRPYYLAHIRRKHENEKKYQCQFCEKQFFMKSEVVRHQMGHTGEKYSCDVCGKNFSSMWVLNGHYRTHGQERARPRLKKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01136300; iTF_01134736; iTF_01135297;
- 90% Identity
- iTF_01136300; iTF_01134736; iTF_01135297;
- 80% Identity
- iTF_01136300;