Basic Information

Insect: Pandemis corylana
Gene Symbol: -
Assembly: GCA_949127965.1
Location: OX421878.1:1550994-1553306[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0012 1.7 9.4 1.5 18 43 7 29 2 30 0.92

2 17 0.0024 3.4 8.4 0.0 18 43 66 88 64 89 0.93

3 17 0.00066 0.93 10.2 0.4 17 43 96 119 93 120 0.91

4 17 0.00086 1.2 9.8 0.3 18 44 127 150 125 150 0.92

5 17 1.6e-05 0.022 15.4 0.9 15 43 154 179 152 180 0.91

6 17 0.042 59 4.4 0.6 17 44 185 209 181 209 0.88

7 17 1 1.4e+03 -0.0 0.1 19 29 239 249 235 261 0.71

8 17 2 2.9e+03 -1.0 0.1 19 43 292 313 287 314 0.77

9 17 6 8.6e+03 -2.5 1.3 17 26 320 329 303 343 0.58

10 17 0.029 42 4.9 0.0 17 44 349 373 344 373 0.84

11 17 0.024 34 5.2 1.3 12 43 392 420 387 421 0.85

12 17 0.068 96 3.8 7.5 5 29 414 438 411 450 0.71

13 17 1.2 1.7e+03 -0.2 11.6 13 43 451 478 442 508 0.81

14 17 9 1.3e+04 -3.0 0.9 18 27 515 524 513 531 0.81

15 17 2.6 3.7e+03 -1.3 0.2 34 43 558 567 544 568 0.67

16 17 5 7.1e+03 -2.2 1.5 13 28 570 585 562 593 0.69

17 17 0.0014 2 9.1 2.6 17 43 610 633 595 634 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0012	1.7	9.4	1.5	18	43	7	29	2	30	0.92
2	17	0.0024	3.4	8.4	0.0	18	43	66	88	64	89	0.93
3	17	0.00066	0.93	10.2	0.4	17	43	96	119	93	120	0.91
4	17	0.00086	1.2	9.8	0.3	18	44	127	150	125	150	0.92
5	17	1.6e-05	0.022	15.4	0.9	15	43	154	179	152	180	0.91
6	17	0.042	59	4.4	0.6	17	44	185	209	181	209	0.88
7	17	1	1.4e+03	-0.0	0.1	19	29	239	249	235	261	0.71
8	17	2	2.9e+03	-1.0	0.1	19	43	292	313	287	314	0.77
9	17	6	8.6e+03	-2.5	1.3	17	26	320	329	303	343	0.58
10	17	0.029	42	4.9	0.0	17	44	349	373	344	373	0.84
11	17	0.024	34	5.2	1.3	12	43	392	420	387	421	0.85
12	17	0.068	96	3.8	7.5	5	29	414	438	411	450	0.71
13	17	1.2	1.7e+03	-0.2	11.6	13	43	451	478	442	508	0.81
14	17	9	1.3e+04	-3.0	0.9	18	27	515	524	513	531	0.81
15	17	2.6	3.7e+03	-1.3	0.2	34	43	558	567	544	568	0.67
16	17	5	7.1e+03	-2.2	1.5	13	28	570	585	562	593	0.69
17	17	0.0014	2	9.1	2.6	17	43	610	633	595	634	0.78

Sequence Information

Coding Sequence: ATGGCCTCCTCAGAATACGAGTGCGACTACTGCACACGTACATTCACTAGGAAATACAACTTGTCAACACACATAGAGAACTGTCACATAAACTCGACATCCTACTGCGACATATGCGACCAAAGATTCGGCAGTCCAGCTGGGTTGCAGCTCCACTTAAGCCGTGGTCACAACAGGTTCCAACAACCGTACCCCGAATGCGATCTTTGCGGCCGTATATTCACGAGGAAGCAAAATGTCGTCTCTCATATGGTCACTGTTCATTACCAAGGTATTGGACCTCAAATACAGTGCAATATTTGCTTTAAAACGTTCACAACTGAAAGGAATCTTAAACGGCATGTCAATCAGCTTCATAACCCTGATGTTGAATATCCTACATGCGACTACTGTAGCAAAGTGTTCAAAGGAAAGCATTCTCTGATAGCGCATATACAAGCTACGCATAATGTGTTGAAAGGCATTATCAAATGTGAACTGTGTGGCAAGGTTTATACAAATAACAGAAATCTGAAGAGACACATCGAGATGTTTCACGGCGAGAAAGGAGAGTTCAGATGTGATCGCTGCCCTAAAGTATACACGTCTAACCAGAGCTTGAGACGCCATGCTAGAACGAGACACAACACAGACGAATTCAACTGTAAACCAGAAATAATAGAGATAGAAGACACGAATGATGCTGTTTACGATACACAAACTTTAGAATTCCCTTGTTCCCATTGTGATAAACATTTCGCTGAAGAGCCTATGCTCCGACAGCACGTCAAGGGTGAACATTCGTTCAAAATCTTCTATGAATACTGCAAAAACTCTTTACTCAAACAAATGGCTGGTAAAACTGAAGAGAAAGCTGTTAAAGTTAACTATAACTGTGAGAATTGCAGTGCTGTTTTTAGCACAGTTTATGAGTTAAAAGACCACATGAGAGCTAGTCATGACAAGGAGTACTCACTGAGCACATGCAATGTGTGCTTCACGAAGTTCTACAGCAAAGAAACCATGTTGGAGCATAAGAAGACCTGTCTACCGCCTCCTGATGTCAACGCTTGTAATTATTGTGATAAACTTTTTACTGATATATCGAGCTTGGAGTTTCACATTAGGATTTTCCATCCTCAAGCACAGATAGCTGATAATGATGTGACTTCGACTAATCTTGAAGACACGTCGATGGAAGCTGGTTCTTTTAAATGTGAGCTCTGCGACCGTATCTATTATAGTGACCGCTCACTCAAACATCATATCAAATTGAAGCACACGACGGACGAGGTCGTGGAATGCGGCTTGTGTGGAAAGATCTGCAGCAACAAATACTATCTCGCGTCGCATATTAAGATAGTCCATAACAACGATTCTTGGTCGAAATGTGACTATTGTGACAAGCAGTTCAAGTCCAAAAGGAACATTCGGCGTCACATAGAATACACGCATTTAGGAAAGCAAAGATACAAGTGCATTGAATGCGAGACGCTTTTCAAAGAGAAACGGAGTCTCCGAAAACATGTGAGAACGAAGCACCCTAATTCGACAATATTCCCTCAGTGTCATATTTGCTATAAGCGATTCGAGTCCGCGAAATCctgcaaaatacatctcaagCTACTGCACTCTTTCAACATGAATACGTACCCTTGCGATCTTTGCTCCGTCTCCTTCAGTTCCAACGAAGCTCTGAACATCCATTTACAGACCAAGCATCTAGCGGAAGACCAGATCTTCAAATGCGAGCAATGCAACATAGTTTTCAATGGCCAAGAGAAATTTGAGCAGCACAACGAAATATGTCACGTGAATTTGCTGCCGAATATAAAGCAGAAGATGTTGCCGCGTTGCATCATTTGCATCAAGGACTTCAGCACCCGGAAGACCCTGAAACGTCACATCAAGAAGTTTCACGATGACTTTGACGCGGAAGAATTGGCGACGTACGGCTCTAAGAAGAGAATGTTTACCATAGAATGCACTGAGTGCATACAGAACTTTAACGACGACTTTTATTATGACGTGTATCTGAAATTGAAGCATTTGAAAGACTCTATAGTCTTCAAATGTGAGAGTTGTTCGTCATCGTACGATTGTCTGGAATATTCTATCCAGAGGTATAAGCTGATGAATTTGGAAGCTTGTAAGAGCAAGATGATTTTGAGTGAATTGTGTACAGCTGAGATGAGTGATGGTGCTTCTAATAGTGGCTTTGACATGGAGTTTATGGAACCAGAGAGTACCACAGGGGACATTAATGTCAAGATGGAACCTATGGAGTTTGATGCTGACGCGGAGGCTGTCAAGGCTGAGCCTATGTCTCCGTAG
Protein Sequence: MASSEYECDYCTRTFTRKYNLSTHIENCHINSTSYCDICDQRFGSPAGLQLHLSRGHNRFQQPYPECDLCGRIFTRKQNVVSHMVTVHYQGIGPQIQCNICFKTFTTERNLKRHVNQLHNPDVEYPTCDYCSKVFKGKHSLIAHIQATHNVLKGIIKCELCGKVYTNNRNLKRHIEMFHGEKGEFRCDRCPKVYTSNQSLRRHARTRHNTDEFNCKPEIIEIEDTNDAVYDTQTLEFPCSHCDKHFAEEPMLRQHVKGEHSFKIFYEYCKNSLLKQMAGKTEEKAVKVNYNCENCSAVFSTVYELKDHMRASHDKEYSLSTCNVCFTKFYSKETMLEHKKTCLPPPDVNACNYCDKLFTDISSLEFHIRIFHPQAQIADNDVTSTNLEDTSMEAGSFKCELCDRIYYSDRSLKHHIKLKHTTDEVVECGLCGKICSNKYYLASHIKIVHNNDSWSKCDYCDKQFKSKRNIRRHIEYTHLGKQRYKCIECETLFKEKRSLRKHVRTKHPNSTIFPQCHICYKRFESAKSCKIHLKLLHSFNMNTYPCDLCSVSFSSNEALNIHLQTKHLAEDQIFKCEQCNIVFNGQEKFEQHNEICHVNLLPNIKQKMLPRCIICIKDFSTRKTLKRHIKKFHDDFDAEELATYGSKKRMFTIECTECIQNFNDDFYYDVYLKLKHLKDSIVFKCESCSSSYDCLEYSIQRYKLMNLEACKSKMILSELCTAEMSDGASNSGFDMEFMEPESTTGDINVKMEPMEFDADAEAVKAEPMSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00680825;
90% Identity: iTF_00462589;
80% Identity: iTF_01135008;