Pcor007492.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pandemis corylana
Gene Symbol
Rel
Assembly
GCA_949127965.1
Location
OX421856.1:5797860-5824778[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-18 9.8e-15 55.6 0.0 41 168 128 255 114 256 0.87

Sequence Information

Coding Sequence
ATGCCCAAGCCCAAGAACGTTAAAGATCTAGAAAGGTTCCTTGGTTTAGTTACATACGTAGACGCCAGCAAGCACGGGCTCGGCGGCTGCATCCTGCAGGATGGCTTGCCAGTATGTTACGCTTCTAAGTCGTTAACAAAAACTGAACAAGCGTACGCGCAAATTGAAAAAGAACTATTTGCTGTTGTGTTCGCGTGCGAAAAGTTCTATACTTATATATACGGAAAAAATGACGTTACAATAGAAACGGATCACAAGCCTTTGTTAGTGTATAAACCCGGCAGATACCTATACATAGCCGACGCGCTATCTCGCGCCGTgcaggcgggcgcgggcgcgggcgcgggcgcgggcgcgggcggcgactACTTCGACGCGCGTGCACAGTTGGTGAACTACGACAAGCAGGCGTTGCTCCGGTGCTGGCTGGTGGAGCATCTGCGCGAAGACGAGCACCCGCACCAGCTGCTGGAGGATGAGCACGAGGAGCGCGACGTCAGCGCGCTGGTGCCTGTAGAGGGCAGCTACAGAGTCGGatTTCCGGGCATGGGCATCATACACACGGCCAAGAAAGATGTGGCCAAAGTATTGCACAATAAATATGTTAAGGAACCACATAGATACCGCAGCCTACAGtctaTGGCTCACTGCGCGTCGGAGGCTAAGAGGATAGACCTAAACATTGTGCGCCTGAAGTTTAGCGCCCACGACTATGAAACAGGCCAAGAAATCTGCGCTCCAGTGTTTTCAAATCCCATCTACAACATAAAAAGTCCTGCGACCAATGAGTTGAAAATATGCCACACAAGCCATATATCCGGAAAACCAAAGGGCGGAGACGACATTATTATCTTGGTAGAAAAAGTTAACAAGAAAAACATTCAAATCCATTTTGTGGAACGCAATCAGGAGGGGGATCAAGTTTGGATGGCTAAAGGCCACTTCCTGGAATCGGGCGTCCACCATCAATATGCAATAAGGTTCAGGACTCCAGCTTACGATAATCCGCACATCACGTCCAGTGTGAAGGTGTACATGGAACTGTTCCGGCCTTCTGACGGCCGTCGCAGCAACCAAATAGAGTTCACCTACCGTGCAGACCGCCTAGCCTGGCCGAAGGAGAAGTCGTATGCTGCTTGGAATGGTGCTGCTCTGGGTACCGAGTCCATTAAACCCCTAACTGAATTGCCGGGCGCCGTTTCAGATATATCAAACGAGATTGAAGATATGGAAATAGAGGAATTTGTATTGGAACAGCTGAACGTGCCTCAATTAATACAAGAGGGCAGCAACATGAGCTTCGGGGACGAAATGCGCTTTGCCTCCGAACAACCAGTCGAATTGGAATCCATAGCACCACAGATAGACATAGACGATCCCATGATCTCCGAAGTGCTCCAGTCACTGTTGTCGTCAACAGAATTGCAAGATTTCAATGGTCCAGCTCAGTATGTGGCAGATAAGTCCACTTCTCCATCAAAATATGAAAAGAACGTGCAGCAAATCGCTGGACAAGAATCAATGAATGAGTACACAGCAACGTATTCCTATGAGCACGGAGAAGAAGTTAGAAAGgtgGTGAAGGAAATTTGCGATCAGATAAGGCTCAGAACTGGAATCAAAAAACAAGAGATTAAAGAGAAACTGGAGCGACTGTTACAGCTGCGCCTGTCAAATGGAGACACATTCCTCCACATGGCTCTGTGGAACAACCGGTCCACTTTCGAAAACATCGTGAAGCTGATCGACAAAATGAAGATGCCTCATCTGTTGAATCTGACAAACGATCTAGGGCAGACCATCCTTCACTTGGCTGTCGTTCGTGATATTCCTGAATACATGTCTTTCCTTATATCTAAAGGTTGCGACCCTTCAATCGGCGATAAGGACGACAACACCGCTGTGCACCTCGCGGTGCAATACCAGGCGTGTGCGCAGCCGCTGCTCGCCGCGATCCGCAGCAGCGGCAGCGCGTGCGCCCTCGACGCGCAGAACAAAGATAAACAAACGGCGCTGCATCTGGCCGCCGTCCCGGGTACGCACCCTGAAACGGTAGCCTCGTCAGTACAGAGCATCGAGCTGTTGCTGCAACACGGCGCGAGCCACAACGCGCGCGACCACGAATGCCGCACGCCGCTGCACCTTGCCGTCTACGACGATTGCTTGCCGGTTGTGCGCGCTCTACTGAAGTTTACACCACAGAGCGACGTCGATGTTGTGGACGGGAATGGTAACACGGCGCTGCAGATCGCTTGCGGCGGCCAAGTCAGAGCCAACACCGTCGAGATTGTCAAACTGCTGATTCAGAAAAAGGCGGATCCCCTGGCGCAGTGCGGGCACTGTGAGAGCGCGTGGCGCCTGACGGCCGACAAgccgccgctgcgcgcgctgctggcgccgcTCGTGCCCGCTGATGCTGACGTCAAGCTCGAGCCCGAGGACGACTATGAGTCGGCAGACGAAGGGGATGACTCTGTGGAGCATGAAGACCACTCTGCGAGCGCGGTGCTCCAGACCACCGACAAGCCGCAGCTCGTCGCTGCAGAAGCAGACGTCAAGTCCGAGCCAGAGGATGACTACGAGTCGGCGGACGAGGGGGTGGACCCTCTGGCGAAGGAAGAAAGCCAGCAGTCTCTGACCACCGAGAAGTTGCCGCTCGTGGCTGATGGGCCCGATGTCAAGCCCGAGTCCGAAGGTTGTTACCAGTCGACGGACGAAAGGGTCAGTGCACTTTACAGAGTTCCGTAA
Protein Sequence
MPKPKNVKDLERFLGLVTYVDASKHGLGGCILQDGLPVCYASKSLTKTEQAYAQIEKELFAVVFACEKFYTYIYGKNDVTIETDHKPLLVYKPGRYLYIADALSRAVQAGAGAGAGAGAGGDYFDARAQLVNYDKQALLRCWLVEHLREDEHPHQLLEDEHEERDVSALVPVEGSYRVGFPGMGIIHTAKKDVAKVLHNKYVKEPHRYRSLQSMAHCASEAKRIDLNIVRLKFSAHDYETGQEICAPVFSNPIYNIKSPATNELKICHTSHISGKPKGGDDIIILVEKVNKKNIQIHFVERNQEGDQVWMAKGHFLESGVHHQYAIRFRTPAYDNPHITSSVKVYMELFRPSDGRRSNQIEFTYRADRLAWPKEKSYAAWNGAALGTESIKPLTELPGAVSDISNEIEDMEIEEFVLEQLNVPQLIQEGSNMSFGDEMRFASEQPVELESIAPQIDIDDPMISEVLQSLLSSTELQDFNGPAQYVADKSTSPSKYEKNVQQIAGQESMNEYTATYSYEHGEEVRKVVKEICDQIRLRTGIKKQEIKEKLERLLQLRLSNGDTFLHMALWNNRSTFENIVKLIDKMKMPHLLNLTNDLGQTILHLAVVRDIPEYMSFLISKGCDPSIGDKDDNTAVHLAVQYQACAQPLLAAIRSSGSACALDAQNKDKQTALHLAAVPGTHPETVASSVQSIELLLQHGASHNARDHECRTPLHLAVYDDCLPVVRALLKFTPQSDVDVVDGNGNTALQIACGGQVRANTVEIVKLLIQKKADPLAQCGHCESAWRLTADKPPLRALLAPLVPADADVKLEPEDDYESADEGDDSVEHEDHSASAVLQTTDKPQLVAAEADVKSEPEDDYESADEGVDPLAKEESQQSLTTEKLPLVADGPDVKPESEGCYQSTDERVSALYRVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-