Basic Information

Insect: Pammene aurita
Gene Symbol: sip1
Assembly: GCA_947086415.1
Location: OX352290.1:49519495-49553244[-]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.5e-34 3.9e-30 106.9 1.5 8 173 370 517 363 526 0.93

2 11 3.2e-09 7.9e-05 23.8 0.2 127 173 527 569 524 579 0.88

3 11 3.1e-09 7.8e-05 23.9 0.2 127 173 579 621 574 630 0.89

4 11 3.4e-09 8.4e-05 23.7 0.2 127 173 631 673 627 681 0.89

5 11 3.2e-09 7.9e-05 23.8 0.2 127 173 683 725 679 734 0.88

6 11 4.1e-09 0.0001 23.5 0.2 127 173 735 777 731 787 0.88

7 11 3.3e-09 8.1e-05 23.8 0.2 127 173 787 829 784 838 0.88

8 11 4.4e-09 0.00011 23.4 0.2 127 173 839 881 836 890 0.88

9 11 3.4e-09 8.5e-05 23.7 0.2 127 173 891 933 887 940 0.89

10 11 3.5e-08 0.00088 20.4 0.1 127 173 943 985 940 994 0.88

11 11 1.3e-33 3.3e-29 103.8 0.4 127 275 995 1139 992 1139 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.5e-34	3.9e-30	106.9	1.5	8	173	370	517	363	526	0.93
2	11	3.2e-09	7.9e-05	23.8	0.2	127	173	527	569	524	579	0.88
3	11	3.1e-09	7.8e-05	23.9	0.2	127	173	579	621	574	630	0.89
4	11	3.4e-09	8.4e-05	23.7	0.2	127	173	631	673	627	681	0.89
5	11	3.2e-09	7.9e-05	23.8	0.2	127	173	683	725	679	734	0.88
6	11	4.1e-09	0.0001	23.5	0.2	127	173	735	777	731	787	0.88
7	11	3.3e-09	8.1e-05	23.8	0.2	127	173	787	829	784	838	0.88
8	11	4.4e-09	0.00011	23.4	0.2	127	173	839	881	836	890	0.88
9	11	3.4e-09	8.5e-05	23.7	0.2	127	173	891	933	887	940	0.89
10	11	3.5e-08	0.00088	20.4	0.1	127	173	943	985	940	994	0.88
11	11	1.3e-33	3.3e-29	103.8	0.4	127	275	995	1139	992	1139	0.96

Sequence Information

Coding Sequence: ATGTCAGACGACGAGGTAATACGCTTCGAAATTACCGATTATGATTTAGACAACGAGTTCAATCCAAACAGGAGAGGGAGGGCCAAGAAAGAGCAGCAAATTTATGGTGTATGGGCTAAAGACAGTGATGAGGATGACAATGAAGACAATGTGCGGCAGAGAACTCGTAAACAGAAGGACTATGCCGCTCCCATTGGCTTTGTGGCGGGAGGTGTCCAGCAAGCTGGGAAAAAGAAGGAGGCTAAACAAGAGATAGAATCAGCAGACAAAACATCTAGGCCAACTATAGTGGATAGCTCAGATGAGGAGTCAACAGTGGCCCAACCCGATGAGTCGGAGACAGCAGGCATCCGGAGACAGGGCCAGGGCATGCGCCCTGCCAACTTTAGCGGGAACATGGGCACATGGGAGAAGCACACTAAAGGGATAGGAGCAAAGCTGCTCTTACAGATGGGTTACCAGCCTGGGCGCGGTCTGGGTAAAGACCTGCAGGGTATCTCGGCGCCTGTCGAGGCCACAGTGAGGAAAGGCCGAGGCGCTATCGGTGCTTACGGCCCTGAGAAAGCAGCTCTAAAAGCTAAGAAAGAGGAAGAGCGCCGCTTGAAAGAGAAGGAAGATGAGAAGCAGCCAGAGAAGTCGTACCACTGGAAGAAGTCCCACAAGGGCCGCTACTTCTACCGGGACTCGCAGGATGTCATACAAGAGGGGAAACCCACGGTACACACCATCAGCAGTAGCGAGTTGTCCCGGGTGCCAGTGATCGACATGACGGGCAAGGAGAAGCGCGTGCTGAGCGGCTACCACGCGCTGCGCGCCGCGGCGCCGCGCTTCGAGCACGAGCCCCGGCGGAAGCTCACCAACTTCTCGGAGCCGCAGCTGGTGCACAACCTGGAGGTGATGGTGGAGTGCTGCGAGCAGGATATCATTCAAAACGCTCGCGAGCTCCAACAAGCGGAGGACGAGATCGTAGTCCTCGAGCGAGACCTGAAAGAGTGCGACGACAAACTTCTAGAACAGGACGAGATTATAGACAAAGTGCGCGACATCAGGGAAAGGGTGGCGAAGTTGAGCGAGCCTGACCTCTCGCTTGAGAGGGCGTTTGAGGTCGTCTCCGATCTGAAGGAATCTCATCCGCTCGAATACGACATGTTCGGGATCGGCGCCATCGCCGGCAACATCGTCAGCCCCCTGTTCAGCGCCCTAATGGCGCAGTGGGACCCCCTCAAGGCGCCCTCAGAACCCGTGCCGGTGTTCCTCAAATGGCGCGATTTACTGAGCGAAGAGGCTTATAATAGTCTGTTGTGGCAACATTACGCACCTGCCCTTAAGACTGCTGCTGCTGCATGGAACCCCCGCAACCCGGCGGCAATGCTGGCATCTCTAACCGAGTGGTCGGCAGCCGTCCCACCGTGGCTGTCGGCGTCCGTGGCCGCTAACGTGGTGGCGCCGCGCCTGCTGGACGCCGTGCGCGGCTGGGACCCCACGCACGACACGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGGTCAGTATCTACCAACGTGGTGGCGCCGCGCCTGCCGGACGCCGTGCGCGGCTGGGACCCCACGCACGACACGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGGTCAGTATCTACCAACGTGGTGGCGCCGCGCCTGCCGGACGCCGTGCGCGGCTGGGACCCCACGCACGACACGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGGTCAGTATCTACCAACGTGGTGGCGCCGCGCCTGCCGGACGCCGTGCGCGGCTGGGACCCCACGCACGACACGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGGTCAGTATCTACCAACGTGGTGGCGCCGCGCCTGCCGGACGCCGTGCGCGGCTGGGACCCCACGCACGACACGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGGTCAGTATCTAGCAACGTGGTGGCGCCGCGCCTGCCGGACGCCGTGCGCGGCTGGGACCCCACGCACGACACGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGGTCAGTATCTACCAACGTGGTGGCGCCGCGCCTGCCGGACGCCGTGCGCGGCTGGGACCCCACGCACGACACGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGGTCAGTATCTAGCAACGTGGTGGCGCCGCGCCTGCCGGACGCCGTGCGCGGCTGGGACCCCACGCACGACACGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGGTCAGTATCTACCAACGTGGTGGCGCCGCGCCTGCCGGACGCCGTGCGCGGCTGGGACCCCACGCACGACACGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGGTCAGTATCTACCAACGTGGTGGCGCCGCGCCTGCCGGACGCCGCGCGCGGCTGGGACCCCGCGCACGACACGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGGTCAGTATCTACCAACGTGGTGGCGCCGCGCCTGCCGGACGCCGTGCGCGGCTGGGACCCCGCGCACGACACGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACCCTCTAGCAGGCTCGGCGCTGTCGACGGCCGTGTACCCGCTGCTGCGCTCGCGGCTGGCGGCGGCGCTGGCGGCGTGGCACCCGGCGGACGGCTCGGCGCGGCCGCTGCTGGCGGCGTGGCGGCAGGCGTGGGGCGCCGCGCTCACCGCCATGCTGCACCAGCACATCGTGCCCAAGCTGGAGCACTGCCTGCAGCACGCGCCGGTGCATCTCGTGGGCCAGGAGAATACGGCGTGGCTGTGGTGCGTGGACTGGCTGGAGCTGCTGGGCGCGCCCACGCTGGGCGCGGTGGCGGCGCGCGCGCTGCTGCCGCGCTGGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGGTGCTCAACAGCTACACGCAGTTCAAGGTGGGTGTTACATACAGTGGCGTGGCTACAGCTGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGGTGCTCAACAGCTACACGCAGTTCAAGGTGGGTGTTACATACAGTGGCGTGGCTACAGCTGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGGTGCTCAACAGCTACACGCAGTTCAAGGTGGGTGTTACATACAGTGGCGTGGCTACAGCTGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGGTGCTCAACAGTTACACGCAGTTCAAGGTGGGTGTTACATACAGTGGCGTGGCTACAGCTGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGGTGCTCAACAGCTACACGCAGTTCAAGGTGGGTGTTACATACAGTGGCGTGGCTACAGCTGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGGTGCTCAACAGCTACACGCAGTTCAAGGTGGGTGTTACATACAGTGGCGTGGCTACAGCTGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGGTGCTCAACAGCTACACGCAGTTCAAGGTGGGTGTTACATACAGTGGCGTGGCTACAGCTGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGGTGCTCAACAGTTACACGCAGTTCAAGGTGGGTGTTACATACAGTGGCGTGGCTACAGCTGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGGTGCTCAACAGCTACACGCAGTTCAAGGTGGGTGTTACATACAGTGGCGTGGCTACAGCTGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGGTGCTCAACAGCTACACGCAGTTCAAGGTGGGTGTTACATACAGTGGCGTGGCTACAGCTGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGGTGCTCAACAGTTACACGCAGTTCAAGGTGGGTGTTACATACAGTGGCGTGGCTACAGCTGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGGTGCTCAACAGTTACACGCAGTTCAAGGTGGGTGTTACATACAGTGGCGTGGCTACAGCTGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGGTGCTCAACAGTTACACGCAGTTCAAGGTGGGTGTTACATACAGTGGCGTGGCTACAGCTGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGTGGCGTGGCTACAGCTGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCGCAGGTGCTCAACAGTTACACGCAGTTCAAGAAAATCTTCCCCGAAGAGGTCCTCAAAGAGCCGGGCGTCCGCGACGCCTTCCGCAAGGCCCTGGACATGATGAACCGCAGCGCCGACATCGACTCCGTGGAGCCCCCGCCGCCGCCGCGGTTCACGGCGCTCACCATGGACAAGGAGACCAGCAAGATCGCGGACGTCCTGGCCTCCACCACGCAGCAGAAGAGCTTCTCGGAGCTGCTGGAGTCCAGGTGTATAGAGAGAGGTATCACGTTCGTACCGCTCGCGGGCAAGACGCGGGAAGGGCGGCCCCTGTACAAGATCGGCAACGCCAGCATGCAGTGCTACGTCATCAGGAACGTCATCATGTACTCGCAGGACAGCGGGAGGACCTTCGAGCCGGTCGGCTTGGACAGGCTACTGGGTATGGCCGAGGAATAA
Protein Sequence: MSDDEVIRFEITDYDLDNEFNPNRRGRAKKEQQIYGVWAKDSDEDDNEDNVRQRTRKQKDYAAPIGFVAGGVQQAGKKKEAKQEIESADKTSRPTIVDSSDEESTVAQPDESETAGIRRQGQGMRPANFSGNMGTWEKHTKGIGAKLLLQMGYQPGRGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAALKAKKEEERRLKEKEDEKQPEKSYHWKKSHKGRYFYRDSQDVIQEGKPTVHTISSSELSRVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRKLTNFSEPQLVHNLEVMVECCEQDIIQNARELQQAEDEIVVLERDLKECDDKLLEQDEIIDKVRDIRERVAKLSEPDLSLERAFEVVSDLKESHPLEYDMFGIGAIAGNIVSPLFSALMAQWDPLKAPSEPVPVFLKWRDLLSEEAYNSLLWQHYAPALKTAAAAWNPRNPAAMLASLTEWSAAVPPWLSASVAANVVAPRLLDAVRGWDPTHDTQPLHAWVLPWHPLAAAARLGAAVAPSSRSVSTNVVAPRLPDAVRGWDPTHDTQPLHAWVLPWHPLAAAARLGAAVAPSSRSVSTNVVAPRLPDAVRGWDPTHDTQPLHAWVLPWHPLAAAARLGAAVAPSSRSVSTNVVAPRLPDAVRGWDPTHDTQPLHAWVLPWHPLAAAARLGAAVAPSSRSVSTNVVAPRLPDAVRGWDPTHDTQPLHAWVLPWHPLAAAARLGAAVAPSSRSVSSNVVAPRLPDAVRGWDPTHDTQPLHAWVLPWHPLAAAARLGAAVAPSSRSVSTNVVAPRLPDAVRGWDPTHDTQPLHAWVLPWHPLAAAARLGAAVAPSSRSVSSNVVAPRLPDAVRGWDPTHDTQPLHAWVLPWHPLAAAARLGAAVAPSSRSVSTNVVAPRLPDAVRGWDPTHDTQPLHAWVLPWHPLAAAARLGAAVAPSSRSVSTNVVAPRLPDAARGWDPAHDTQPLHAWVLPWHPLAAAARLGAAVAPSSRSVSTNVVAPRLPDAVRGWDPAHDTQPLHAWVLPWHPLAGSALSTAVYPLLRSRLAAALAAWHPADGSARPLLAAWRQAWGAALTAMLHQHIVPKLEHCLQHAPVHLVGQENTAWLWCVDWLELLGAPTLGAVAARALLPRWLGALAAWLNTAPPHAQVLNSYTQFKVGVTYSGVATAAGRAGRVAQHRAAARAGAQQLHAVQGGCYIQWRGYSCWARWPRGSTPRRRTRRCSTATRSSRWVLHTVAWLQLLGALAAWLNTAPPHAQVLNSYTQFKVGVTYSGVATAAGRAGRVAQHRAAARAGAQQLHAVQGGCYIQWRGYSCWARWPRGSTPRRRTRRCSTATRSSRWVLHTVAWLQLLGALAAWLNTAPPHAQVLNSYTQFKVGVTYSGVATAAGRAGRVAQHRAAARAGAQQLHAVQGGCYIQWRGYSCWARWPRGSTPRRRTRRCSTATRSSRWVLHTVAWLQLLGALAAWLNTAPPHAQVLNSYTQFKVGVTYSGVATAAGRAGRVAQHRAAARAGAQQLHAVQGGCYIQWRGYSCWARWPRGSTPRRRTRRCSTVTRSSRWVLHTVAWLQLLGALAAWLNTAPPHAQVLNSYTQFKVGVTYSGVATAAGRAGRVAQHRAAARAVAWLQLLGALAAWLNTAPPHAQVLNSYTQFKKIFPEEVLKEPGVRDAFRKALDMMNRSADIDSVEPPPPPRFTALTMDKETSKIADVLASTTQQKSFSELLESRCIERGITFVPLAGKTREGRPLYKIGNASMQCYVIRNVIMYSQDSGRTFEPVGLDRLLGMAEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -