Paur043089.1
Basic Information
- Insect
- Pammene aurita
- Gene Symbol
- Slc27a1
- Assembly
- GCA_947086415.1
- Location
- OX352293.1:28133820-28161880[-]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.25 6e+02 2.1 0.0 59 81 704 726 701 732 0.87 2 9 0.25 6e+02 2.1 0.0 59 81 741 763 738 769 0.87 3 9 0.23 5.5e+02 2.2 0.0 59 81 778 800 775 806 0.87 4 9 0.23 5.5e+02 2.2 0.0 59 81 815 837 812 843 0.87 5 9 3.7 8.7e+03 -1.7 0.0 60 81 853 874 850 878 0.85 6 9 0.23 5.5e+02 2.2 0.0 59 81 885 907 882 913 0.87 7 9 4.8 1.1e+04 -2.0 0.0 60 81 923 944 920 947 0.87 8 9 1.2 2.8e+03 -0.1 0.0 60 81 956 977 953 981 0.88 9 9 0.9 2.1e+03 0.3 0.0 60 82 993 1015 990 1020 0.86
Sequence Information
- Coding Sequence
- ATGTTGCTTGCCGGAGCCGCTGTAGTCGCAGCGTGTGCCTTTTTCCTCTATTATGGCTTTCTCTCCACTTTGACGGTATCTGTTGGTTTAGTGATAGTGTATATTGCCTTGTTCCACTGGAGATGGTGTTACGTCGCCCTGAGGACTATCCCGAGGGATATAGCAGCATTAATATGCTACGTAAAACTGCTATGGCTAACGAGACAGTTGACAAAGAAGAACTGGACTATTCCGGATGCATTCCACGAAACTGTGTCCCGCCATCCAAACAAACCATGCTTCCTGTACCAAGATGAAGTGTGGACTTTTAAGGAGGTGGAAGACTTCAGCTTACGCGTGACAGCCGTGCTGAAAGCGCAGGGCGTGAAGAAAGACGGCGTGGTGGGCATCCTGATGAGCAACTGCCCCCAAATGCCTGGCATCTGGATGGGCGCGGGCCGGTTGGGTGCGGTGTGCCCGCTCATCAACACGAATCAGCGCGGCAACGCTTTGATACATTCAGTCAACGTTGCTAATTGTGACGTCGTCATATACTCAGAGGAATATCAGACCGCAATTCAAGAGGTAGCCGGTCAATTGACTCCATCACTGAAATTATTGAAGTTTGTTCACCGGCCCCTCAATACCGCGAACACTGAAAACAAAGCCAGTGGCGATCAGATAACTGACCTGACATCTTTGCTGGAGACTACACCACCAGCGCCGTGGACCCTGGCTGATGCAGATGGCTTCCACGGGAAACTTCTATACATCTACACCTCTGGAACCACTGGATTGCCTAAAGCAGCCGTCATCTCAAGCTCTAGATTCGTGTTCATGGCCGCTGGTCTCCACTACCTGGGCGGTATAACTCCCGACGACACAGTGTACTGCCCGCTGCCGCTATACCACACGGCGGGGGGAATCATCAGCGCCGGCCAAGCGCTGCTCTTTGGGTGCACGGTGGCCGTCAAGGCCAAGTTCTCCGCGTCGCAGTACTTCCCCGACTGCATTAAGTATAAAGCTACGGTAAGACATGGTTTACTAAGTCTTAGTCCCACTAGTATAACTCCCGACGACACAGTGTACTGCCCGCTGCCGTTGTATCACACGGCGGGGGGAGTCATCAGCACCGGCCAAGCGCTGCTCTTTGGCTGCACGGTGGCCGTCAAGGCCAAGTTCTCCGCTTCGCAGTCCTTCCCCGACTTCCCACTACCCGCTATAACTCCCGACGACACAGTGTACTGCCCGCTGCCGCTGTACCACACGGCGGGGGGAGTCATCAGCACCGGCCAAGCGCTGCTCTTTAGGTGCACGGTGGCCGTCAAGGCCAAGTTCTCCGCTTCGCAGGACTTCCCCGACTGCATTAAGTATAAAGCTACGGTCGCCCACTACATCGGCGAGATGTGCCGCTACGTGCTGGCGACGCCGCCCGCGCCGACCGACACGCAGCACTCCGTCCGCACTATCTTCGGCAACGGCATGCGCCCTCAGATCTGGAACGAATTCGTGACGAGATTCAACATCCAACACGTTGCCGAGTTCTATGGAGCAACCGAAGGCAACGCTAATATAGTGAACATCGACAGTAAACCCGGCGCGATCGGGTTCGTGTCCAGGATTATTCCTCACGTGTACCCGATCGCGATTATAAAGGTGGACCAGGAGACTGGCGAGCCTATACGAGACTCCAGTGGACTTTGTCAGCTCGCACAGCCGGAGGAGCCGGGCGTGTTCATCGGCAAGATCGCGCCCAACAACCCCGCGCGCGCGTTCCTAGGCTACGTCGACAAGTCCGCGTCCGACAAGAAGATCGTCAGAGACGTCTTCGCTAAGGGAGACTCGGCGTTCATCTCCGGCGACATCTTAGTGGCAGACGAGCTGGGCTACCTGTACTTCCGCGACCGCACGGGCGACACGTTCCGCTGGCGCGGCGAGAACGTCAGCACCACCGAGGTGGAGAGCGCCGTGTCGCGCGTCGCTGACCAGAGAGACGCTGTTGTCTATGGAGTCGAGGTTCCAAACGCGGAAGGGCGTGCTGGCATGTGCGGCATCGTCGACGTCAACGGAACTCTCGACCTGGACAAGTTAGCGCGGGACCTGGCCAAGGACCTGCCTGCGTACGCGCGCCCGGTCTTCATGCGGGTCATGCCGAGCATGGACATGACAGGTAAGTCACAGACCTGGACCGTAGACAAGTTAGTGCGGGACCTGGCCAAGGACCTGCCCGCGTACGCGCGCCCGGTCTTCATGCGGGTCATGCCGAGCATGGACATGACAGGTAAGTCACAGACCTGGACCGTAGACAAGTTAGTGCGGGACCTGGCCAAGGACCTGCCCGCGTACGCGCGCCCGGTCTTCATGCGGGTCATGCCGAGCATGGACATGACAGGTAAGTCACAGACCTGGACCCTAGACAAGTTAGTGCGGGACCTGGCCAAGGACCTGCCCGCGTACGCGCGCCCGGTCTTCATGCGGGTCATGCCGAGCATGGACATGACAGGTAAGTCACAGACCTGGACCCTAGACAAGTTAGTGCGGGACCTGGCCAAGGACCTGCCCGCGTACGCGCGCCCGGTCTTCATGCGGGTCATGCCGAGCATGGACATGACAAGTAGGTCACAGACCTGGACCCTAGACAAGTTAGTGCGGGACCTGCCCGCGTACGCGCGCCCGGTCTTCATGCGGGTCATGCCGAGCATGGACATGACAGGTAAGTCACAGACCTGGACCCTAGACAAGTTAGTGCGGGACCTGGCCAAGGACCTGCCCGCGTACGCGCGCCCGGTCTTCATGCGGGTCATGCCGAGCATGGACATGACAAGTAGGTCACAGACCTGGACCCTAGACAAGTTAGTGCTGGACCTGCCCGCGTACGCGCGCCCGGTCTTCATGCGGGTCATGCCGAGCATGGACATGACAGGTAGGTCACAGACCTGGACCCTAGACAAGTTAGCCTGGGACCTGGCCAAGGACCTGCCCGCGTACGTGCCCCCGGTCTTCATGCGGGTCATGCCGAGTATGGACATGACAGGTAGGTCACAGACCTGGACCCTAGACAAGTTAGCGCGAGACCTGTCCAAGGACCTGCCCGCGTACGCGCGCCCGGTCTTCATGCGGGTCATGCCGAGTATGGACGTGACAGGTACATTTAAAATGAAGAAAACCGACTTGCAAAAGGAAGGTTTCGATCCTGCCATTGTGAAGAAAGACAAGCTATACTACCTCGACGCGAAATTGGGCCGGTACCTACCGCTGGGCAAGGAAGAGTATGAAAAAATTGTTCAAGGACAGATACGAATATGA
- Protein Sequence
- MLLAGAAVVAACAFFLYYGFLSTLTVSVGLVIVYIALFHWRWCYVALRTIPRDIAALICYVKLLWLTRQLTKKNWTIPDAFHETVSRHPNKPCFLYQDEVWTFKEVEDFSLRVTAVLKAQGVKKDGVVGILMSNCPQMPGIWMGAGRLGAVCPLINTNQRGNALIHSVNVANCDVVIYSEEYQTAIQEVAGQLTPSLKLLKFVHRPLNTANTENKASGDQITDLTSLLETTPPAPWTLADADGFHGKLLYIYTSGTTGLPKAAVISSSRFVFMAAGLHYLGGITPDDTVYCPLPLYHTAGGIISAGQALLFGCTVAVKAKFSASQYFPDCIKYKATVRHGLLSLSPTSITPDDTVYCPLPLYHTAGGVISTGQALLFGCTVAVKAKFSASQSFPDFPLPAITPDDTVYCPLPLYHTAGGVISTGQALLFRCTVAVKAKFSASQDFPDCIKYKATVAHYIGEMCRYVLATPPAPTDTQHSVRTIFGNGMRPQIWNEFVTRFNIQHVAEFYGATEGNANIVNIDSKPGAIGFVSRIIPHVYPIAIIKVDQETGEPIRDSSGLCQLAQPEEPGVFIGKIAPNNPARAFLGYVDKSASDKKIVRDVFAKGDSAFISGDILVADELGYLYFRDRTGDTFRWRGENVSTTEVESAVSRVADQRDAVVYGVEVPNAEGRAGMCGIVDVNGTLDLDKLARDLAKDLPAYARPVFMRVMPSMDMTGKSQTWTVDKLVRDLAKDLPAYARPVFMRVMPSMDMTGKSQTWTVDKLVRDLAKDLPAYARPVFMRVMPSMDMTGKSQTWTLDKLVRDLAKDLPAYARPVFMRVMPSMDMTGKSQTWTLDKLVRDLAKDLPAYARPVFMRVMPSMDMTSRSQTWTLDKLVRDLPAYARPVFMRVMPSMDMTGKSQTWTLDKLVRDLAKDLPAYARPVFMRVMPSMDMTSRSQTWTLDKLVLDLPAYARPVFMRVMPSMDMTGRSQTWTLDKLAWDLAKDLPAYVPPVFMRVMPSMDMTGRSQTWTLDKLARDLSKDLPAYARPVFMRVMPSMDVTGTFKMKKTDLQKEGFDPAIVKKDKLYYLDAKLGRYLPLGKEEYEKIVQGQIRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -