Paur044787.1
Basic Information
- Insect
- Pammene aurita
- Gene Symbol
- Rel
- Assembly
- GCA_947086415.1
- Location
- OX352298.1:20885896-20947217[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-19 2.4e-15 58.4 0.1 1 87 113 199 113 208 0.88 2 3 3.6e-13 4.5e-09 37.9 0.0 62 168 216 324 199 325 0.80 3 3 2.1 2.6e+04 -3.6 0.1 99 119 356 376 355 394 0.72
Sequence Information
- Coding Sequence
- ATGTCAACAAGTGAGCATGAAACTATGAGCGAAGCGGCGTCTTCCCCCTTGTCCTACATGGGGTCACCTAATCGGTCGCCGTGCCAGCAAGTGCCCCAGTTGGCTAACTGCTTCACGGAACTTACATGTGCTGATTTCAATGGTTTCCATGGCAAAGAGGGAAGGTCATTCCTAAAGGAGTTAGGGCGCCGCCTGCAGGACAGGGGTCTAGACCCCCGTTCCGGGATGTTCCTGCTGCAGAGGCTGTCCATCGCAATCCAGCGCGGCAACGCAGTGAGCGTGATGGGCACCTTTGCACCGGAACAGCCCATGACGGATTGTTTATACAGGCCGTTCCTGCGCATCGTGGAGCAGCCGCAGGACCACTTCCGGTTCCGCTACAAGAGCGAGATGGTCGGTACTCACGGCTGCCTGCTCGGGAAGACCAGCACCACCGGCAAAGTCAAGACGCATCCTATGGTCGAGTTGGTGAACTGGAACAAGCAAGCATTGATCCGCTGCAGGCTGGCACAACATTTGAAACCAGACGAACACCCGCACCAACTGCTGGAGGACGAGCAGGAGGACAAAGACGTCAGCGCTGAAGTACCGGAGCGCGGCAGCTATCGGGTCGGGTACTCGGTGCACTGGTTGGCGCAGTATTTGAAACCTGACGAACACCCGCACCAACTGCTGGAGGACGAGCAGGAGGACAGAGACGTCAGTGCTGAACTATCGGAGTGCGGAAGCTATCGGGTCGGTTTTGCTGGCATGGGCATCATACACACGGCTAAGAAAGATGTCCCCGCTTTGCTGTACAAGAAATATAAGGAGAGGCAAGGAAAACTCATTGATAACAGAGAGCTCCTGAGCTTCTGCGAGACGGAGGCGCGAGGTATCAACCTGAACATCGTGAGGTTGAGGTTTAGCGCACACGACATCGAGACCGACCGCGAGATCTGCCTTCCGGTGTTCTCCGAACCTATACATAACATGAAGAGCGCAGCAACTAATGACCTGAAGATATGTCGTATAAGCAAATTCTACGGTCGGGCCAAGGGCGGCGAGGACGTTTACATTCTGGTGGAGAAAGTTAACAAAAAAAACATTAAGATCCGCTTTGTGGAACGAAATGAGAACCACGAAGAGGTGTGGTCGGCCGAAGCACACTTTCTTCAGAGCGACGTGCACCACCAATACGCTATTGTATTCAGGACACCAGCGTACAGGGACCAGCAGATAACCTCCGACGTAAAAGTGTTCGTAGAGTTATTCCGGCCAACAGACGGCCGCTGCAGCGATCCCAAGGAGTTCACGTACCGCGCCGACCCGCTCACCAAGCAGAACAAGAAGAGGAAACTTAACTCGCAATCGCCGTACGACTCCTTTAGCAGCACCAGCTCGATAGGCCTTATGAGCCGTTACCTAATTGAAGTTCAGCATCGAAAAAGGCGCCCAGAACCAAGCACAAGGGGCGGCGCGCGCCGCCCCTGGCAGCCTGCCGCCCCGGGCCATGGCCCTTTTGGCCATAGGGTACCTGTAATGATGGAAACGCAAACCAACGCCGACTTAGGCGATGCACTCATGGGTATGGCATGCGACCAAGAGCAAGCTCCCAGCCCTCTACAACTGCACTGCACCGTGATGCCGAGCCCTATGATGCCTCAGGCTGATCCTCCGACGATCAGTCTAAACTCTACCGAGTTTGCCAATCTTTTGAGGGCCGATTTAGAGCCAGAACAGAGGGATGACTTCACCGCATTCTGCCAACAGTACATAACTCCTTCGATGACAGAGTTCATGACAGATCGATTGGAAGAGGATTCTGGAGTTGGACGCAAGAAGCCTGTACTCCAAAATAAGCCGTATCCAACAAGGCAGCTAAGCGCTCGCCCACAAACCGAAAAAACCCACAACACATCGGACAAGTCGAGCGAGTACACAGCCGTCTACACGCCAGAACACGGAACGGAGGTTAAGAAATTAGTAAAGGAGATCTGCAATCACATACGGAATAAGACTGCTTTCAAGAAGCAAGTCGTGAAAGAGAAACTGGAGAGGCTATTTGCTATGCGCTTATCCAACGGAGATACATTCCTTCACATGAGCCTTCACAACAACAGAGTCAGTTTCGAATACATTGTGAAAATTTTGCACACGATGAAAATGCACCATCTCCTAAACCTAACCAATGATCTCGAGCAGACGATTCTGCACATGGCGATCATCAACGACCTTCCGCCGTTGGTTACAGTGCTCATAGCTAACGGTTGCGACCCGATGGTAGGCGACCATGAGGGCAACAACGCAGTGCATTATGCGGCGCAGCTCGGAGTTTGCATGCAGCCGCTGCTGGAAGCTATCAAGAAGAACAAAGTGTCGTGTGACCTCAACGCCGTCAACAAAGAAAAACAAACTGCCCTCCACCTAGCAGTGCTGCCAGGAACCGAGCCATCCGACATCGAAGCAGCAAAACAATCCATCAAACTGCTCCTACAACACGGCGCCAGTCACAACGCGCGCGACTCCGAGGGCCGCACACCGCTCCACCTCACCGCCTACGACGACCGCCTGCCGGTCGCCAGAGCTCTGCTGGACCACATGCCAGAGAGTGACATCGATGCCATAGACAGCCGCGGCTACACGGCCCTGCAAATCGTGTGCGACGGCGTAATCAGGGAAAACACCATCGAATTTATGAAATTGCTCATTGCCAAAAAGGCGGATCCTTACGAGCACGAGCCGCACACGGAGCCGGCGTGGGCGCTGTCGCGCGACAAGCCGGAGCTGCGCGCGGCGCTGGCGATCTATCTCGACTGCGACACCGACGTCAAGTCTGAGCCCGAGGACGAGTACGAGTCCGCCGATGAGGGGGGATTAGCGTATTGGGTCATACAAAGCCGGGTAGACATGGATACTAGTAACTGTCAGGGAAATATCGGGGCCGTTTTTGAGAGCTATGCTTCTGAAGACGCCTACATGTCCCTTTAA
- Protein Sequence
- MSTSEHETMSEAASSPLSYMGSPNRSPCQQVPQLANCFTELTCADFNGFHGKEGRSFLKELGRRLQDRGLDPRSGMFLLQRLSIAIQRGNAVSVMGTFAPEQPMTDCLYRPFLRIVEQPQDHFRFRYKSEMVGTHGCLLGKTSTTGKVKTHPMVELVNWNKQALIRCRLAQHLKPDEHPHQLLEDEQEDKDVSAEVPERGSYRVGYSVHWLAQYLKPDEHPHQLLEDEQEDRDVSAELSECGSYRVGFAGMGIIHTAKKDVPALLYKKYKERQGKLIDNRELLSFCETEARGINLNIVRLRFSAHDIETDREICLPVFSEPIHNMKSAATNDLKICRISKFYGRAKGGEDVYILVEKVNKKNIKIRFVERNENHEEVWSAEAHFLQSDVHHQYAIVFRTPAYRDQQITSDVKVFVELFRPTDGRCSDPKEFTYRADPLTKQNKKRKLNSQSPYDSFSSTSSIGLMSRYLIEVQHRKRRPEPSTRGGARRPWQPAAPGHGPFGHRVPVMMETQTNADLGDALMGMACDQEQAPSPLQLHCTVMPSPMMPQADPPTISLNSTEFANLLRADLEPEQRDDFTAFCQQYITPSMTEFMTDRLEEDSGVGRKKPVLQNKPYPTRQLSARPQTEKTHNTSDKSSEYTAVYTPEHGTEVKKLVKEICNHIRNKTAFKKQVVKEKLERLFAMRLSNGDTFLHMSLHNNRVSFEYIVKILHTMKMHHLLNLTNDLEQTILHMAIINDLPPLVTVLIANGCDPMVGDHEGNNAVHYAAQLGVCMQPLLEAIKKNKVSCDLNAVNKEKQTALHLAVLPGTEPSDIEAAKQSIKLLLQHGASHNARDSEGRTPLHLTAYDDRLPVARALLDHMPESDIDAIDSRGYTALQIVCDGVIRENTIEFMKLLIAKKADPYEHEPHTEPAWALSRDKPELRAALAIYLDCDTDVKSEPEDEYESADEGGLAYWVIQSRVDMDTSNCQGNIGAVFESYASEDAYMSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -