Basic Information

Insect: Pammene aurita
Gene Symbol: Emc2
Assembly: GCA_947086415.1
Location: CAMTYY010000023.1:51620-62742[+]

Transcription Factor Domain

TF Family: TSC22
Domain: TSC22 domain
PFAM: PF01166
TF Group: Basic Domians group
Description: These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0041 69 5.1 0.0 11 31 137 157 134 167 0.87

2 10 0.005 83 4.9 0.0 11 30 174 193 171 198 0.87

3 10 0.0081 1.4e+02 4.2 0.0 11 31 211 231 208 242 0.85

4 10 0.0038 63 5.3 0.0 11 31 248 268 245 280 0.85

5 10 0.0028 46 5.7 0.0 11 30 285 304 275 309 0.84

6 10 0.004 66 5.2 0.0 11 31 322 342 319 353 0.85

7 10 0.004 66 5.2 0.0 11 31 359 379 356 390 0.85

8 10 0.003 50 5.6 0.0 11 30 396 415 393 427 0.85

9 10 0.005 83 4.9 0.0 11 30 433 452 430 457 0.87

10 10 0.2 3.4e+03 -0.3 1.1 11 23 470 482 468 490 0.56

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0041	69	5.1	0.0	11	31	137	157	134	167	0.87
2	10	0.005	83	4.9	0.0	11	30	174	193	171	198	0.87
3	10	0.0081	1.4e+02	4.2	0.0	11	31	211	231	208	242	0.85
4	10	0.0038	63	5.3	0.0	11	31	248	268	245	280	0.85
5	10	0.0028	46	5.7	0.0	11	30	285	304	275	309	0.84
6	10	0.004	66	5.2	0.0	11	31	322	342	319	353	0.85
7	10	0.004	66	5.2	0.0	11	31	359	379	356	390	0.85
8	10	0.003	50	5.6	0.0	11	30	396	415	393	427	0.85
9	10	0.005	83	4.9	0.0	11	30	433	452	430	457	0.87
10	10	0.2	3.4e+03	-0.3	1.1	11	23	470	482	468	490	0.56

Sequence Information

Coding Sequence: ATGTCTTACAATTACGAAGATCTCAGCATTGGAGAAATAAAAGATTTGTTGCGGCTTTGGCGGGAGAACAACGAGCGGCGCAGCGAGGACGTCATGGAGTTCTGGGTCACCATCATGGATGACATCAACAAGCTCGGCAATGAGAAGTATTTAATCCTGGAGCAAGTGCTGTACGCTGCGCTGGACACGCACACGTACAGCGTGTCCAAGCAGTGCATCTCCATGCTGAAGCAAGAGTTCCCGGGCAGCATGCGCGTGCTGCGGTACAAGGCGGCGCAGCTGGAGGCAGAAGAACGATATGAAGAGGCCCTGGAGCTGCTGGACGTGATAATCAAGGCGGACGAGACGAACGCAGCCGCCCGCAAGCGCCGCGTGACCCTCCTGAAGGCGCAGGGGCTCGTGGTGGAGGCTATCAGGGAGCTGGTGGACTACTTGAAGAAGCAAGTACCACCCTTGTCTTATACTGTAGATAACAAGCGCCGCGTGGCCCTCCTGAAGGCGCAGGGGCTTGTGGTGGAGGCCATCAGGGAGCTGGTGGACTACTTGAAGAAGCAAGTACCACCCTTGTCTTATACTGTAGATAGCAAGCGCCGCGTGACCCTCCTGACGGCGCAGGGGCTCGTGGTGGAGGCCATCAGGGAGCTGGTGGACTACTTGAAGAAGCATGTACCACCCTTGTCTTATACTGTAGATAGCAAGCGCCGCGTGACCCTCCTGAAGGCGCAGGGGCTCGTGGTGGAGGCCATCAGGGAGCTGGTAGACTACTTGAAGAAGCAAGTACCACCCTTGTCTTATACTGTAGATAGCAAGCGCCGCGTGACCCTCCTGAAGGCGCAGCGGCTCATGGTGGAGGCCATCAGGGAGCTGGTGGACTACTTGAAGAAGCAAGTACCACCCTTGTCTTATACTGTAGATAGCAAGCGCCGCGTGACCCTCCTGACGGCGCAGGGGCTCGTGGTGGAGGCCATCAGGGAGCTGGTGGACTACTTGAAGAAGCAAGTACCACCCTTGTCTTATACTGTAGATAGCAAGCGCCGCGTGACCCTCCTGAAGGCGCAGGGGCTCGTGGTGGAGGCCATCAGGGAGCTGGTGGACTACTTGAAGAAGCAAGTACCACCCTTGTCTTATACTGTAGATAGCAAGCGCCGTGTGACCCTCCTGAAGGCGCAGGGGCTCGTGGTGGAGGCCATCAGGGAGCTGGTGGACTACTTGAAGAAGCAAGTACCACACTTGTCTTATACTGCAGATAGCAAGCGTCGCGTGACCCTCCTGAAGGCGCAGGGGCTCGTGGTGGAGGCCATCAGGGAGCTGGTGGACTACTTGAAGAAGCAAGTACCACCCTTGTCTTATACTGTAGATAGCAAGCGCCGCGTGGCCCTCCTGCAGGCGCAGGGGCTCGTGGTGGAGGCCATCAGGGAAGTGGTGGAGGCCATCAGGGAGGTGGTGGAGACCATCAGGAAGCTGGCGGTCATAAAGCACCATTTGTAA
Protein Sequence: MSYNYEDLSIGEIKDLLRLWRENNERRSEDVMEFWVTIMDDINKLGNEKYLILEQVLYAALDTHTYSVSKQCISMLKQEFPGSMRVLRYKAAQLEAEERYEEALELLDVIIKADETNAAARKRRVTLLKAQGLVVEAIRELVDYLKKQVPPLSYTVDNKRRVALLKAQGLVVEAIRELVDYLKKQVPPLSYTVDSKRRVTLLTAQGLVVEAIRELVDYLKKHVPPLSYTVDSKRRVTLLKAQGLVVEAIRELVDYLKKQVPPLSYTVDSKRRVTLLKAQRLMVEAIRELVDYLKKQVPPLSYTVDSKRRVTLLTAQGLVVEAIRELVDYLKKQVPPLSYTVDSKRRVTLLKAQGLVVEAIRELVDYLKKQVPPLSYTVDSKRRVTLLKAQGLVVEAIRELVDYLKKQVPHLSYTADSKRRVTLLKAQGLVVEAIRELVDYLKKQVPPLSYTVDSKRRVALLQAQGLVVEAIREVVEAIREVVETIRKLAVIKHHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -