Pscu010508.1
Basic Information
- Insect
- Palloptera scutellata
- Gene Symbol
- ZNF131
- Assembly
- GCA_958295655.1
- Location
- OY282451.1:21053536-21063906[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.00081 0.041 14.3 1.6 1 23 140 162 140 162 0.98 2 16 0.058 2.9 8.5 6.0 1 23 168 191 168 191 0.95 3 16 0.00073 0.037 14.5 0.9 2 23 446 467 445 467 0.97 4 16 4.6 2.3e+02 2.5 4.1 1 23 473 496 473 496 0.94 5 16 0.15 7.3 7.2 1.3 1 23 521 544 521 544 0.96 6 16 0.051 2.5 8.7 6.7 3 23 591 611 589 611 0.96 7 16 0.015 0.73 10.4 3.7 3 23 812 832 811 832 0.92 8 16 0.046 2.3 8.8 0.6 1 23 838 861 838 861 0.93 9 16 0.41 20 5.8 0.1 2 23 898 920 897 920 0.95 10 16 0.1 5.1 7.7 0.4 1 23 934 957 934 957 0.96 11 16 0.34 17 6.1 1.4 1 23 1042 1064 1042 1064 0.97 12 16 0.0024 0.12 12.9 3.5 1 23 1075 1097 1075 1097 0.98 13 16 3.3e-06 0.00017 21.8 0.6 1 23 1102 1124 1102 1124 0.98 14 16 0.00043 0.021 15.2 8.6 1 23 1130 1153 1130 1153 0.95 15 16 0.0059 0.3 11.6 0.5 1 20 1158 1179 1158 1182 0.92 16 16 1.1e-05 0.00055 20.2 2.8 1 23 1188 1211 1188 1211 0.98
Sequence Information
- Coding Sequence
- ATGGATGAATGTTATGGAACGATCGATTACAAGCTTGTCTGTAGAACGTGCCTTACTGCAGATgcagaattttataaattgagtGCACCAATAATTTGTGATGAAGATGACGAGGAAAAGACTAGTTTTCAGGAATGTTTACACTATTGCACACATCTAGAAGATCTGTCACACCTTCCAATTTACATTTGCACTGAGTGCAGCACAGCATTACAAGTGACATATAACTTTATACGGAATGCTGTGGAAGCACATGAAATTCTGCGCCAAAAATTGTGCCCAACACAGCAGCGAAATAATGGTGGACTACACATGAGAACTTCTTTGTCATCGGTGGTTGGTGACGATGAAAATGGGAGTGGCGGAGGGAGAGGAGATATTGTTGCATCGgATGCTACAATGGATAAAAAAATGCGATTCCGCTGTAAAGTATGTAATGAAaaagttgaaacaaaaaaatcattaaaacaacATGTTAAATTGCATTTGGATATCATCTCGTACTGCTGCCAAATGTGTAATTACGAAAGTAAGAATCGTAGTCATCTTAGCAATCATTATTCGATTACACACGGCATGGAACCTACACGAGATCAACTAAAACCCAAAACTTTAGTACTTCAACCGAAAATTGAGGAAGATGGTCGAGTAAAAGATGCaagagaaaatgtaaattttgaatcATTTGCACAAAATGATGATGAAATATATATGCAAATGGAGAAAATACACAATAACGCAGCAATTGACGGAAATTCCGGTGTAGCAgctgattatgatgatgatgagctGCTCAGGCAGCAGCGACAACAACTTTTCGAATTGGAACATCAATTGGAGTTAGAgaaacatcaaaaacaacaactagtgatacagcatcagcaacagcagcagcagcatcaaataGATGATGATATTGCTATGACTAATGTGATACCCACCGTCATAAATGATGATAATATTCAAGATTTTCGAAATGATTTTAGTATAGCAGGAAATGAATTAAGTATTGGAAATGAATTTATTGTGATGGCAGATGGCAGTGTTGAAGAAGTTATGGAAAATGGTGTAGTCATTGAATATATTAATGCTGCCGGTGATGGTGTTACTCTAGAGAATGGTTTGGTTTTAAATAATATCGTCAAAGTTGACCAACATACAACTAGCAATCGTGGAAATGTTGACAATGGTACAAATGTCATAAATATGGATGTTGACGACATTATAATTGAGGAAAATGTTAATGAGGttaTAGATATGCCCAGCATTGAAGATGACATACCGCAATCTATTATCGCAGTTGCTGGAGTGACGGCGCGaactgaaaagaaaatcaaatgtaaaatatgcGCTGATAATTTTAGCACACAAGAGAAACTAAAGACGCACATGTTAACACATAATGAAATACCGCATTTTTTCTGCGATCAATGCACATTTTATACgttctttaaaatcgatttaacGCAACATTATAAAACCAAGCATAAACTACAGCCGACTGTTAAGCAATTGCAAccgaaaaataaagttaaaaccgAAGTGGATACACGTCATATATACACATGTGATTTATGCCTTTTTGAGACTTATGTGAAAGTCAATTTGCGACGCCATTATTTGAGTAAACATCAAGTTGAGGCTACAGATGTTCAATTGCGTCCAACACTCGgtaATGAAACTGATCTTGACTCGCTACCTATTGTACGcactccaaaaaaaaagcagacaCCTACACCGCCTAAACCCGATTATCCGAATGGTATCaattgtaaaaaatgttttaaaacgttctattattgtaataaattaaagGAGCACTATAAGCGTCATAATCTTGAATTTGATGTAGACACATTAGAATTGAATCATATCGGAAtggaaaacatttcaaaacagcaacatcaatatCAACAGCAAAACAATCAGCAGCATCAGTCAATAGCAACAATGAAATATAATGCACAAGAAGATTATATTTTAGTAGAACAGCAAAGTGAACATCGTCAGCAAACTAACAATTTGCTCGATAATACAAGAGCAACGGATATATTAAGACCAGCACAGACTGCTACTACTACGAATTGTATTATCAATAATACACCATCATTACCACCAACAATACAAGCGACAACCACCACCGGTTATAGCGCATTGCCCTCCGATGCGATACCGCAAATTGTTGAAACGGATACTGCTATCGATAATGATATAGATTTTGACTTTAATGATGCTCTCTTTGAGGATtttgaagatgaagatgaagaaaacgataacgatgatgatgacaatgaagAATTGCAAGATTTACTTTTGACCAGCGAAGATGATTTTGAAGATGTACTTGAAGaacaacaggaacaacagcaacaacaactaaatcaTAACAGCAACAGTGATAATATTCTAATAAATAGTATGCCTGAGCCATATTGCATACATTGCAATAAGAAATTTTTCAGTCAATATCAATTTGAGAATCACATGTTTGTGCATCGTGGACTTGCGCCATATCGTTGTGAGATGTgtacaaatttatacaatacaaaACGAGCTCTAATACGACATTATACTGCTGTTCATAAAAGAGTACCAACTAGAGATATGATACAAGCGAAAGGTGATAAAGTTTCTGTGGACAGAACTCCTGTGGAACATTTAAACCTACAAGAACAAAAAGcaATCACGCTTATGTGTGCAAAATGTCCTTATGAATCAACCGAATTATTgaatttacaaatacatttaaGTACAAGCCACGGAATTACAGACGAAAACTTCATTTTGCAAAAATTATCTTTTGAGTGTCCCCGATGCATACGCTCGTATGCAACAAAATTACGCCTAATACGACACTTGGAACGTAGTCATTCTGTGGCCACAATTATACAACAACATACACAACTGGATGCAGCCGAGAGTTTATCACCACCACCAACAGCTACAATACCTGCCTCAATTGCCCCAAATTCTAGATGTGgCATAGTAGAGCTAGATATCAATGatgaaattacaataaatgaGGAAAACGACACCATAACAACAGCACCAACCGCAACggcatcaacaccaacaataagatcaataaaatttaaaaaagaaaaactaacagAAAAATCTCATTATAATTGCAAAGCATGTGATTTCATATGCAGCACCATTGAACTATTAAATGAACATAGTAAATCACATCCCAGCGATGATATacgaacaaattttaatttcgaatgCAGTATCTGTTCGTGTAAGTATAAAACAATTGAAGCGTTGAAATACCACATGAAAAGGCATATAGCGAGGAAATATCGCTGCAAAcaatgcccgaaatcatatatAAATCGCGGCGAATTGAATAATCATATGTTGCTGCATACCGGTGAGATGCCGCATAAATGTGATATGTGCAATAAGAAATTCCGTTATTCTCATCATTTGAAGCGGCATCGTGATGTTTTGCATTACGGAAAACGTTTTCGTTGCCCCACTGACGGTTGCGAACGATTTTTCACAACGCAAGCACAAATGAAAATACACACATGGACTCATAATGGCAATGTACCGTACAAATGTAAATACTGCGATCGTGATTTCAAAAAGCGTGAatcTCTACGACAACATGCCCGCAAAGTGCATAATGTGAATTTAACTGAAGAGGAAATAGCTGAAATTTTTCGCAACACTGTTGGCCACACAAATCCCCATGATTTTACCGTATCTGTTTCGAATGGGAAAATGGTGCGTCGCAGTGAAGTTGAAGCCGCTGAAGCAGAATCGgacatttttttccaaaacagtaGCAGCAATCTTCCaaataatgacgatgatgaaacTTTAgattaa
- Protein Sequence
- MDECYGTIDYKLVCRTCLTADAEFYKLSAPIICDEDDEEKTSFQECLHYCTHLEDLSHLPIYICTECSTALQVTYNFIRNAVEAHEILRQKLCPTQQRNNGGLHMRTSLSSVVGDDENGSGGGRGDIVASDATMDKKMRFRCKVCNEKVETKKSLKQHVKLHLDIISYCCQMCNYESKNRSHLSNHYSITHGMEPTRDQLKPKTLVLQPKIEEDGRVKDARENVNFESFAQNDDEIYMQMEKIHNNAAIDGNSGVAADYDDDELLRQQRQQLFELEHQLELEKHQKQQLVIQHQQQQQQHQIDDDIAMTNVIPTVINDDNIQDFRNDFSIAGNELSIGNEFIVMADGSVEEVMENGVVIEYINAAGDGVTLENGLVLNNIVKVDQHTTSNRGNVDNGTNVINMDVDDIIIEENVNEVIDMPSIEDDIPQSIIAVAGVTARTEKKIKCKICADNFSTQEKLKTHMLTHNEIPHFFCDQCTFYTFFKIDLTQHYKTKHKLQPTVKQLQPKNKVKTEVDTRHIYTCDLCLFETYVKVNLRRHYLSKHQVEATDVQLRPTLGNETDLDSLPIVRTPKKKQTPTPPKPDYPNGINCKKCFKTFYYCNKLKEHYKRHNLEFDVDTLELNHIGMENISKQQHQYQQQNNQQHQSIATMKYNAQEDYILVEQQSEHRQQTNNLLDNTRATDILRPAQTATTTNCIINNTPSLPPTIQATTTTGYSALPSDAIPQIVETDTAIDNDIDFDFNDALFEDFEDEDEENDNDDDDNEELQDLLLTSEDDFEDVLEEQQEQQQQQLNHNSNSDNILINSMPEPYCIHCNKKFFSQYQFENHMFVHRGLAPYRCEMCTNLYNTKRALIRHYTAVHKRVPTRDMIQAKGDKVSVDRTPVEHLNLQEQKAITLMCAKCPYESTELLNLQIHLSTSHGITDENFILQKLSFECPRCIRSYATKLRLIRHLERSHSVATIIQQHTQLDAAESLSPPPTATIPASIAPNSRCGIVELDINDEITINEENDTITTAPTATASTPTIRSIKFKKEKLTEKSHYNCKACDFICSTIELLNEHSKSHPSDDIRTNFNFECSICSCKYKTIEALKYHMKRHIARKYRCKQCPKSYINRGELNNHMLLHTGEMPHKCDMCNKKFRYSHHLKRHRDVLHYGKRFRCPTDGCERFFTTQAQMKIHTWTHNGNVPYKCKYCDRDFKKRESLRQHARKVHNVNLTEEEIAEIFRNTVGHTNPHDFTVSVSNGKMVRRSEVEAAEAESDIFFQNSSSNLPNNDDDETLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01470778;
- 90% Identity
- -
- 80% Identity
- -