Pscu014720.1
Basic Information
- Insect
- Palloptera scutellata
- Gene Symbol
- sip1
- Assembly
- GCA_958295655.1
- Location
- OY282452.1:60031181-60034126[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-92 2.1e-88 296.5 16.7 1 275 445 714 445 714 0.98 2 2 0.68 5.9e+03 -3.5 0.0 249 261 733 745 723 766 0.51
Sequence Information
- Coding Sequence
- ATGTCCGACAACGAATATGAACGCTTCGAAATCACAGACTACGATTTAGATAATGAATTCAACATAAATCGACCGCGCCGGCGGCAAACGAAAAATCAGCAGATTTATGGTATTTGGGCTGATGACAGTGATGACAGCGCTGACGAGTCCACACGGAGACGTGGGCGACGTGGTGGACGGTCCGGTCTGGGAGGCGGTGGAAACAAACCGAAAGATTATAGCGCGCCAGTGAGTTTCGTTGCCGGTGGCATACAACAATctggaaagaagaaaaaggataAAGATGAGAAATCCAAAGATGatgataaaaataatcaaataaccGATGAGGAcgaggaggaggaggaagaagaggaTGAAGATGACTCTGATGATAATGCGCGTCCCTCATTTGGTGGACGTAAGAAACCGTCAGGCCAACTCAGAAGTCCTCCGCGTAGTAGTGATGATAATTCGTCGTCGGCTGATGAAGATGAACTGTACAGACGTCAAGTGGCAGCTGCACAAAAACAGCGTAGCGGTGCAGGTGGTGGTCCACGTTCGTCGACAACTAAAAATGTAGGAGCCTGGGAGCAGCATACGCGTGGCATTGGCGCAAAGCTTTTGCTGCAAATGGGCTATAAACCTGGCATGGGCTTGGGTAAAGATCTCCAGGGTATCTCGCAGCCGGTTGAGGCGCATGTGCGCAAAGGCCGCGGAGCGATTGGTGCATATGGGCCGGAAGCAGCAGCCAGTGTGGGCGGAAAAGGGCCCATAGTCAAAGAAGATGAAGATATACGCGAGGCCAAAGAGTTCAAGGAGAAGCTCAATAAATGGAAGAAAGGTAGCGAATCGGCGCGTCCGGATAAGAGCAAGCGATATTACTACAAGTCGGTAGAGGAGGTAATTGAAAAAGGTCAAAAAGGAAATTTACTGCTCTCGGAGAAAATCAGCAAAAAACTTGGCAACGTGCCCGTCATCGATATGACTGGCCCGGAGAAACGCGTGCTCAGCGGCTATCATGCGCTCGCGCAAACAAAAATCATCGATGAAGATCTCTACGACTTGGAATTGGCTTCCAGCAGTAGCGTTGCCAAAAAATCTGCCACCGCTGGCACTACATTTGCTCTGCCCGAACTCATGCATAATTTGCAATTGATTGTGAATATGTGCGAGCAGGATATCATAGCGCTGGATAAAGCTGAGCGTGAGGCCAGTGATAAGCAAGCACGTCTCGAACATGAACGCAAAAATCTTGATGAAATTGTTAACTTGGAAAAGAATCACATCGATACGTTGGAGGAGGCGCTAGTGCTCGTTGCTGAATTAACCGATGACAATGAAAATCTAAAGCTGGAGCGTGCAGAGAAGATTTTTCTGGAGTTACAAACGAACTACGCCGCCGAATATAAAGAATTTGCTTTGGGTGACTTGGCAGCTGGCGTAATAGCGCCCCTGGTCAAAGCGGAACTGGAAAAGTGGAAGCCTCTGGAGCAGCCCACACAAAATCTCGATTTAATCAAGAAGTGGCGTACAATTCTGCATACAAATACAGAGTTGCAAGCGGAGCCACGCAATGTATTCGATCCTTACTCGTCGCTGGTGTGGGCTGGTGTAATACCCAGTTTTCGTGCATGCGCTGCTTCGTGGAATCCCAAGCAACATCAGCTAATGGCTGCACTGCTCGATGCATGGGCGCCTCTGTTTCCTACATGGATTTTGGATTCTGTGCTCGAACAGTTGGTGTTGCCACGTTTAAACAATGGTGTACGCGACTGGGATCCGCTGACCGACACGGTACCCATACACATGTGGATACTACCATGGAATACTATTCTGGGTTATAAAATGGAAGAGTTTATCTTCCCGACTATACGTGAGAAGTTAGCTGCGGCGCTGCAGTCATGGATGCCCCAAGATCGTTCGGCGCGCGCAATGCTCACACCATGGAAGGGTGCATTCAATGATGCCGAGATGCAAATGTTTCTCATACAGCATATTATACCAAAGCTGCAGCTGGTGTTGAGCGAATTCATTATAAATCCATTGCAACAGGATTTGGAACTCTGGAATCAGGTCTGGGAATGGCATGAGTTGGTACCGACTATGCTTATGGGGGAACTGctcaataaatatttctttcccAAATGGATGCAGGTGCTCGTGCTGTGGCTCAATCAATCACCCGACTATGCGGAGATATCACGTTGGTATAGCGGCTGGAAAAGTATGTTCTCTGAGGATATTCTGCGTGAACCGAATATTAAGGAGCATCTACGACGCGCCCTCGAAATGATGCATCGTGCCACAGAGACAGTGGTGACGCCACTAGCCACTGCTGGCGTTATACCAACCATGAATAATACAACTCCGGCGCCGCCTCCTCCTCCGCCACCCTCGCTCATAGATATTCAATTGGCAGTGCCAGCGCAATTGGAATTCAAAGAGTTGGTTTCACAAAAGTGCGCAGAACGTGGCATTTTATTTGCGCCCATGCCGGGTAGGCGTGAACTGGGGAAACAGGTATATCGTGTTGGGAAACTGTTTTGCTATATTGATCGCAATGTCTGCATGCTAAGCGATAGTGGTATGAAAAATTGGAGTCCTACATCATTGGCATCCCTAATGGAACGCGCCTTAACGGGAATCATTTAA
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRQTKNQQIYGIWADDSDDSADESTRRRGRRGGRSGLGGGGNKPKDYSAPVSFVAGGIQQSGKKKKDKDEKSKDDDKNNQITDEDEEEEEEEDEDDSDDNARPSFGGRKKPSGQLRSPPRSSDDNSSSADEDELYRRQVAAAQKQRSGAGGGPRSSTTKNVGAWEQHTRGIGAKLLLQMGYKPGMGLGKDLQGISQPVEAHVRKGRGAIGAYGPEAAASVGGKGPIVKEDEDIREAKEFKEKLNKWKKGSESARPDKSKRYYYKSVEEVIEKGQKGNLLLSEKISKKLGNVPVIDMTGPEKRVLSGYHALAQTKIIDEDLYDLELASSSSVAKKSATAGTTFALPELMHNLQLIVNMCEQDIIALDKAEREASDKQARLEHERKNLDEIVNLEKNHIDTLEEALVLVAELTDDNENLKLERAEKIFLELQTNYAAEYKEFALGDLAAGVIAPLVKAELEKWKPLEQPTQNLDLIKKWRTILHTNTELQAEPRNVFDPYSSLVWAGVIPSFRACAASWNPKQHQLMAALLDAWAPLFPTWILDSVLEQLVLPRLNNGVRDWDPLTDTVPIHMWILPWNTILGYKMEEFIFPTIREKLAAALQSWMPQDRSARAMLTPWKGAFNDAEMQMFLIQHIIPKLQLVLSEFIINPLQQDLELWNQVWEWHELVPTMLMGELLNKYFFPKWMQVLVLWLNQSPDYAEISRWYSGWKSMFSEDILREPNIKEHLRRALEMMHRATETVVTPLATAGVIPTMNNTTPAPPPPPPPSLIDIQLAVPAQLEFKELVSQKCAERGILFAPMPGRRELGKQVYRVGKLFCYIDRNVCMLSDSGMKNWSPTSLASLMERALTGII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01470506;
- 90% Identity
- iTF_01470506;
- 80% Identity
- -