Pscu006014.1
Basic Information
- Insect
- Palloptera scutellata
- Gene Symbol
- dl
- Assembly
- GCA_958295655.1
- Location
- OY282450.1:5234861-5237014[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.2 3.4e+03 -2.2 0.8 115 116 99 100 51 150 0.58 2 5 6 1.7e+04 -11.4 15.3 79 138 176 209 124 235 0.49 3 5 1.8 5.1e+03 -2.8 1.9 115 130 286 301 255 317 0.52 4 5 6 1.7e+04 -8.8 11.0 105 128 334 363 299 375 0.52 5 5 1.1e-32 3.3e-29 102.0 0.0 1 168 467 627 467 628 0.90
Sequence Information
- Coding Sequence
- atgaattattttaagaAAGTCTTTGGCTGTAGAAAGTctcaaaatgaaaatacttcAAATAATGCATGCACTCACATTGGCGATAGTAATGGAGAATCTACAAGTACTAACTACGCAAATAGAAAATCGCCTTTAAGTATTATACAAGATAATAACCAGGAACCTCTAAAGCACCAACAAAAACCTCAACAGCAAGGACAACAAACTTTTAAACAGCAGGACCAGCAACCAAAAGCCCAACAACAGCAGGAACAGCCGGACCTAAAGCCTCAACAAAGAAACGGTCAACAGGAGCAGCAACAAGAGAAACCTCAACAGGAGCACCAAAAACCAAAATCTCAACAGACAGAGCACGAATTGCTGAATCCTCAACGGGAGCTACAGACGTCAAAGCTTCTCCAGCAGCAGCAGGATCCAAATTTTCAACAGAAGCGGCCGCAAACTAAACCTCAACAACAGCAGGAAGAGAAAAAtcaacagcatcagcatcacGAAGAAAAACATAAACAGGAGAAAGAACAAAATTCTCAGCAGCTGCAGCTGGAAGACAATCATCAGGAACAACTGCAGCATCAGCAGATAAAGCAAGAACAGCAGGAACAAAAGACGCAGCTGCACACAGAACAGGAACGCCTTCAACCAAaacatgaacaacaacagcacgaAAAATCTCAGGAGCAAGAAATACCTCCACTGGAACAGGAAGAAAATAATGAACAGCAGCAATGGCAGAAACCTCCAGAGGAGCAACCACAGCTTCAGCAGCAAGAAAACCTTCAGCAGAGGCAGGGACAATATGAATCTCCCCAGAAGCAGGAACTAAAACCTCAGAAGCAAGAACAAAAACCTCAGAAGCAGCTGCAAACGAAAcctcaacatcagcagcaggaAAACAATAATCAACAGCATGAGCATgaacatgaaaaatttattcaacagcAGCAGGAAAAACCTCCAGTGCAGcataaacaagaacaacaaaaacctcAACAGCAAAAGCAGCTACAAGAAAACACtgaacagaagcagcagcaatcaaAAACTCAACAGGAAAAGCATAATCATGAAATtactcaacagcaacagcaaaaaccacaacaaaatatcaatctgtatcaaaatcaaaaacattctCTTGAGCGTCCGCCACGGCCATCTGCCCCTGAACCATCTACTAGCAGCCAGCTAATTGAAGGCTTACCAACCGACTACCAACAATTAGCTGCCCTTCCAACTCGCAGGCTATCAGTTGCTGATCTACCAGCTGTCGGCAAAACTGTAGCCGAACTTCCATTCCCGTCCCCCCAAACATCTCCATCTATGTCACCTACCACCCTATCAGCTACTTCCCGATCACTGGCCATCTCCGGTCCATCTGCTGTACACAGTCGACCTTATTTGAGAATTATTGAACAACCCAAGAAAGCTATACGGTATCTACTTGAATGCAAAGGATATTTAGACAATGTGCTACCGGAGAGTAAGACTAGCACCACAATTGAAATAGTTGGCTACAAAGGACCTGCACTGATTACTTTATCCCTCGTGACCGCCACTCTGCCGTACAAATGTCATCCGTATTCGTTAGTTGGCCGAGATGATACAGTAAATGGCGTTTGTACTGTGAAACCAAATATCGAAGACATGCGTGTTGTAATCAATGATTTGagcataaaatatgtacataaaaaagatATTGAGACCGCATTAACCTTACGCGAAAGTATGTTCATTGATCCATTTGAATGTACAATCGACACTGACGACTTTTTCGATAGTAAAGCAGTACGTTTATGTTTCGAAGCATATCTAAAGAAGGACGAAActgatgaaatttttaaaaaaaagctaCCCCCAGTAGTTACCAATATCATATACAATGGTGATTTCAGTGAAGAGTttcagaataaaattaaaatcaataacgAATGTCTGAAGCGCACCGATTTCGCCCATCAAATCTTTCCATATCATTTCGTCAGTTTACAAAACTACAAAACCAGTGATTATAAACACGTTGAATGCTCGAATGTTGATGACACTGACATTAAGTCTACAGCTTCCCCAAAAAGTACGACCGGGGAAGACGGGTCCCCAATTAGTAGGGGATGGTCAGACTTTGATGAAACAGATTTCTATGACACACAGATATAA
- Protein Sequence
- MNYFKKVFGCRKSQNENTSNNACTHIGDSNGESTSTNYANRKSPLSIIQDNNQEPLKHQQKPQQQGQQTFKQQDQQPKAQQQQEQPDLKPQQRNGQQEQQQEKPQQEHQKPKSQQTEHELLNPQRELQTSKLLQQQQDPNFQQKRPQTKPQQQQEEKNQQHQHHEEKHKQEKEQNSQQLQLEDNHQEQLQHQQIKQEQQEQKTQLHTEQERLQPKHEQQQHEKSQEQEIPPLEQEENNEQQQWQKPPEEQPQLQQQENLQQRQGQYESPQKQELKPQKQEQKPQKQLQTKPQHQQQENNNQQHEHEHEKFIQQQQEKPPVQHKQEQQKPQQQKQLQENTEQKQQQSKTQQEKHNHEITQQQQQKPQQNINLYQNQKHSLERPPRPSAPEPSTSSQLIEGLPTDYQQLAALPTRRLSVADLPAVGKTVAELPFPSPQTSPSMSPTTLSATSRSLAISGPSAVHSRPYLRIIEQPKKAIRYLLECKGYLDNVLPESKTSTTIEIVGYKGPALITLSLVTATLPYKCHPYSLVGRDDTVNGVCTVKPNIEDMRVVINDLSIKYVHKKDIETALTLRESMFIDPFECTIDTDDFFDSKAVRLCFEAYLKKDETDEIFKKKLPPVVTNIIYNGDFSEEFQNKIKINNECLKRTDFAHQIFPYHFVSLQNYKTSDYKHVECSNVDDTDIKSTASPKSTTGEDGSPISRGWSDFDETDFYDTQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -