Pven011781.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pachypsylla venusta
Gene Symbol
Hr39
Assembly
GCA_012654025.1
Location
CM022874.1:19108836-19111094[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1 6.9e+03 -3.7 5.3 56 113 234 287 207 316 0.53
2 4 3.8e-08 0.00026 20.7 0.0 1 21 429 449 429 457 0.92
3 4 0.00093 6.4 6.3 8.6 83 161 468 546 451 556 0.71
4 4 3.2e-66 2.2e-62 212.0 1.7 210 408 554 752 549 752 0.95

Sequence Information

Coding Sequence
ATGACATCCTCGTGGTCCCCACGCCATTCCATTGTGTCTTCTGGGAGTGTTACCGTAACGTCCATTAATTCGGGGCCTGCTCCTAAAGAATGTGTTCAGTTGGACGTGAAAGATAATAAAGATAATACGCGTTGCAGTGTTGTTGTTGCCGCGACAAACTTTAGCCAAAGTATGTCTCCAATGTCGCCGCAGGGGAAGTCAGATGCACCAGGAGACGCATCAGGGGAATCTGATAACGAGGAGATTAGTAAATTGGATCTGGCCACCTCAAATGTTATATTGAGAGACAAAACAAAGAGCAACACATCACCTAAGCATGAACCAGCTGAACGACCGAGGCCAATGTCCTGGGAAGGCGAGTTATCTGATTCAGAAATGAAACAAGAAATAGAGGAGATTTCTATGGATGAGATTGATGACCCGGAAGGAAATCAAAATGGCGTAAAAGTGAAATTTTCGTCAGAACCTTTGACTGAGCGAGATTTGACGAAGCAAACGCCAGACTCACcactattattaaataagtatttAACCAGTAGTAACTTTAGTCCAATCATGACTCGCATGAACCCGAACAAATGTGGCTTTCCGCCCAATCCCAGTCCCGATTCAGCCATTCATTCTTGTTATTCCCCTACGCAGTCACCTGTCACGTCTCGTCATGGGCTATCATCTTCGGGGCTATCTTCGCCGTCTTTGTTTACTCCTTCATCCCTGTCTCGAAATAACAGTGATGCTTCCCAGTACAGTGGTTCCCAGAACTCTTCCAATTACAGTCAAAGCTATTCATCTCAAGTGTCCAGTCCAACACATTCGCCTCTGCAGGGGCGACATTTTTATAAGCTCCAGCAAGAGTACCCTCAACAAAGTAGTGGTAATATGGCGTCTTTCAGTATTAGAAACTTTGATGATAAATTGAGTGATGATTTTAATTCTTCCTTTGGAAGTGGGAGGAGCGATGAACGTCCTAGTGAAGACACGATCAGTATTGATGAACAAAACTATCTCGAAGATAAACTGTCCTCTCTTTCATCTGCACAAACTGGCATCTCGCGACAGCAATTGATCAATAGTCCTTGCCCAATATGCGGGGACAAGATTAGTGGTTTCCACTACGGGATATTCTCTTGTGAAAGTTGCAAAGGCTTTTTCAAGCGAACTGTACAGAATagaaaaaattacatttgtttAAGAGGCTCTAACTGTATAATAAGTATATCAACCCGGAAAAAGTGTCCGGCTTGTAGGTTCAATAAGTGTTTGAACATGGGAATGAAATTGGAAGCCATACGAGAAGATAGGACTCGTGGAGGTAGGAGCACTTATCAGTGCTCCTATACACTTCCTGCTGGTATCGCCAATACGCTCACTCTTGACCCTGTGACAGTAAAACAAGAAGCAGGTGAACCAATGTCCCCGGCATACAACAATCCCAGCTCATGTTTCATACCCCCCTTATTACAAGAAATCATGGAGGTAGAACATCTGTGGCAATATAGTTGTTCCAATTTATCTGAAGAGACTTCTTCTTCCAAGCCATCAATGGGTTCTTCTGTGTCAAATGCGCCCTCTAATTCCCCCACTACACCCTCGTCCACTCCTTCCAAACCGTCCTCGTCAACCCCTTCATCATCGAATCCAAAAGCTTCCACGGATTTTCTGTCTAACCTTTGTAACATAGCTGACAATCGTTTATACAAAATAGTCAAATGGTGCAAGTCTTTGCCTTTGTTTAAGCACATTTCCATCGAcgatcaaatttcattattaattaatagcTGGTGTGAGCTATTATTATTCAGCTGTTGCTATCGGTCTATTAACTTACCCAGTAACGAAATTAAAATCAGTCTCGGCAAAGTGATCACACTAAATCAGGCAAAACAGCTAGGCTTGTCCTCGTGTATCGAAAGAATGttgaatttcaaaacaaatctCAAACGGTTGAAGATCGATAAGTACGAATATGTTACAATGAAGGTCATTATTTTGCTGACAATTTCGGACACCAATGAATTAAAAGAACCTGAGAAAGTTCGGGTTGCTCAAGAAAAAGCTCTGCAAGCCTTGCAATCGTACACACTGTCAAACTATCCCAATATTCCATCCAAATTTGGAGAACTCTTATTGAGGATACCAGACTTGCAAAGGACATGCCAGATCGGAAAAGAAATGCTGTCAATGAAGCATCACAAAGGAGAAGACATGAATGAGCCTAGCTTTAATTTATTGATGGAACTCTTGCGTGGGGATCATTAA
Protein Sequence
MTSSWSPRHSIVSSGSVTVTSINSGPAPKECVQLDVKDNKDNTRCSVVVAATNFSQSMSPMSPQGKSDAPGDASGESDNEEISKLDLATSNVILRDKTKSNTSPKHEPAERPRPMSWEGELSDSEMKQEIEEISMDEIDDPEGNQNGVKVKFSSEPLTERDLTKQTPDSPLLLNKYLTSSNFSPIMTRMNPNKCGFPPNPSPDSAIHSCYSPTQSPVTSRHGLSSSGLSSPSLFTPSSLSRNNSDASQYSGSQNSSNYSQSYSSQVSSPTHSPLQGRHFYKLQQEYPQQSSGNMASFSIRNFDDKLSDDFNSSFGSGRSDERPSEDTISIDEQNYLEDKLSSLSSAQTGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYICLRGSNCIISISTRKKCPACRFNKCLNMGMKLEAIREDRTRGGRSTYQCSYTLPAGIANTLTLDPVTVKQEAGEPMSPAYNNPSSCFIPPLLQEIMEVEHLWQYSCSNLSEETSSSKPSMGSSVSNAPSNSPTTPSSTPSKPSSSTPSSSNPKASTDFLSNLCNIADNRLYKIVKWCKSLPLFKHISIDDQISLLINSWCELLLFSCCYRSINLPSNEIKISLGKVITLNQAKQLGLSSCIERMLNFKTNLKRLKIDKYEYVTMKVIILLTISDTNELKEPEKVRVAQEKALQALQSYTLSNYPNIPSKFGELLLRIPDLQRTCQIGKEMLSMKHHKGEDMNEPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01132269;
90% Identity
iTF_01132269;
80% Identity
iTF_01132269;