Plon024842.2
Basic Information
- Insect
- Pachydiplax longipennis
- Gene Symbol
- nfxl1
- Assembly
- GCA_036926295.1
- Location
- JAVFKF010000004.1:68025535-68039222[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2.5 7.4e+04 -3.9 1.5 15 19 157 161 156 161 0.81 2 20 0.25 7.6e+03 -0.7 0.8 4 10 193 199 192 199 0.95 3 20 2.7e-07 0.0079 18.4 19.2 1 19 207 224 207 224 0.99 4 20 2.3 6.8e+04 -3.7 0.9 6 10 250 254 249 255 0.51 5 20 5.2e-07 0.016 17.5 9.1 4 19 299 314 298 314 0.96 6 20 0.71 2.1e+04 -2.1 0.8 6 10 339 343 338 344 0.90 7 20 0.0012 37 6.7 14.9 1 19 349 369 349 369 0.86 8 20 2.7e-06 0.082 15.2 8.7 1 18 412 429 412 430 0.97 9 20 0.0013 39 6.6 17.7 3 18 466 481 464 482 0.92 10 20 6.2e-09 0.00019 23.6 16.7 1 19 491 509 491 509 0.99 11 20 3 9e+04 -4.4 1.5 5 10 546 551 546 551 0.83 12 20 0.00019 5.7 9.3 7.5 9 19 565 575 563 575 0.91 13 20 0.0055 1.6e+02 4.6 7.0 1 12 586 596 586 596 0.95 14 20 1.2 3.5e+04 -2.8 5.7 14 19 628 633 628 633 0.89 15 20 0.8 2.4e+04 -2.3 0.3 8 12 649 653 649 653 0.78 16 20 0.064 1.9e+03 1.2 7.0 1 11 669 679 663 682 0.91 17 20 3 9e+04 -5.3 3.0 17 18 701 702 698 706 0.48 18 20 0.00062 19 7.7 16.6 1 19 714 732 714 732 0.88 19 20 1 3.1e+04 -2.6 1.3 8 13 737 742 736 743 0.79 20 20 4.3e-07 0.013 17.7 10.1 1 16 791 805 791 806 0.97
Sequence Information
- Coding Sequence
- ATGGCTGGTAGAGGACGGGGGAATGCATGGAATCGAGGATCGGTTACGTTTGGCTCTACATCGTCTGAGATGAAATCGAAACCCGGcatcaaaaatgagaaagtagCCGGAGCAAATAAAGTCGCAGTTGACAAGCAAGCATATTCATCATCGGAAGAAgaggatgatgataataatagcGACGATATCCTAGGAAAAGTTTTGCAAACGTATGCTCAACTAGGTGGTGCCTCTCATGATCTAGGAAGGACTCAGTTATTTCTCGAAGAAGTTTTTCAATCAGGCTCAGCTACTTGTCTTATTTGTATCTCAACCGTAGGGAAAAATGAAGCGATATGGAACTGTTGCCTCTGTTATTGCTTTTTCCACCTTAACTGTTTGCAACGATGGGCACAAGAAAGTATCATGCATCAAAAGAGGGCACTCGAAGAGCAGCCCCTTAGTACTGCGCCCGATTTTAGTTGGAGCTGTCCTAAGTGTCGTCACACATATCCTGAATCTGAAATTCCTAGTAAATACTTGTGTTTCTGTAGCAAGAGGGTGGATCCTCCACCATACAGTGGGTGGCATGTACCACATTCTTGCGGAGAAACCTGTGGTCGTGAACTTACTCCCAGTTGTGGTCATTCATGTCCTCTTCTTTGCCATCCAGGCCCCTGTCCTCCTTGCCCTCGGCAAGTAACTGTTAGTTGTCAGTGTGGAAGGCAACCACCAAAGGCTGTGCGCTGCAGTGGAAAAGTGTGGTCCTGTGGACAACCTTGTAGAAAAGTTCTTCCTTGTAATAGTAGTCAATTGAGaATTAAGGAAAATGCTCCAGTTGGAAGGGGGCGTGGGAAGTTTTTAcaacatttaaatgaaacaaaggAAACAAAAGTTGGGAGAGATGAGGAACCTCACTTATGCTTGGAAATATGTCATTCTGGGCCATGCATGCCCTGCCCTCGGAAGAGTTTACAGCCATGCTGTTGTGGTAAAGAATCAACTCTGAGACCTTGTTCAGATGCGGATTGGCAATGCAAACAAGTGTGTGGTAAGCAGCTGGAATGTGGTCATCATAAATGCAATCTCATTTGTCATAGTGCAAAAGATGGTTGTGGGCCATGTCCAAGAAGTTTAGATAGATTATGTGCCTGTGGTAAAGCCTCTTTTCCTGGTTTACCTTGTGTTGGTGGCATTACTTCTGAAGAGCTGGAGGTTCCTACCTGTGGAGATACATGTGGAAAGTTATTAGCTTGTGGGGTTCATTCCTGTGCACGTAGATGCCACAAGGATGACTGCGGAGCTtgCCTCCAGATGAGAGTCCAGACCTGTCGTTGTGGCCAATATTCAAAAGAACTTCCCTGTCAGAAGGAATTTCTCTGTGAAAATAAGTGCAGAAGAACTAGGAATTGCTTGCGTCATCCCTGCAGCCGTAAATGTTGTGATGGCCACTGTCCACCATGTGacaaaatctgctcaaaaatgTTATCTTGTGGGAAACACCGCTGTCCTGCACCATGCCATCGTGGTCCTTGCTATCCATGCCCCTTAATGGTTACTATATCATGTCCATGTAAATCTACTTCCATTAAAGTGCCTTGTGGGCAGGAACGTCGGATCAAAGGTGATGCTAAAAGGGGTAAAGGCGTCATTGTGAAATGTAGGAAGCCATGCAAGCTACCATCCCAGTGTCAGCATCCACCTAGACCTCACACATGCCACTCTGGGGAGTGCCCCTCTTGTAGAGAAATATGTGGGATTGTAAAAGAGGGTTCATGTGGCCATGCTTGTTCTGCCAAGTGTCATACATCTGTGTGGGTCAAAGAGGAGGTTGAGGCACCAAAGAAACCTGCTGGCCCATGGGAGAAGCCACAAGACCCGAAAATAGTAAAGAAGTGCCTACCTTGTCCCCCTTGCACTACAAAGGTTGAAGTAATTTGCTTAGGTGGACATGAGAAAAACTTTCAGCCATGTCACTCAGCATCTCCATATTGCTGTGGTCGAGAATGTGGTCGTCTGCTCCCTTGCACCTCTCATTCTTGCACTTTCCCTTGTCATCATGTCAAAGGAGGGTCCAAAGATTTGGAGCATGAACCTGCTCTTGCTGGGAAAAACTGTGAATCATGCAACAATCCATGTCTGAAGTCACGTCCAAATGGATGCTCACACACTTGCCCATTAGGCAAATGTCATCCTGGAGATTGTCCCCCTTGTAAGCagaatttaaagcaaaaatgtCATTGTGGTCTTACTCCTTCAATGTTTATCGAATGTCGCAAGTGGGTTGCAGCATTAGCAGAAGATAGTAAGCCTGGAAAAGACAATAGTAAGGAGATAAGTAGTGTTGAGAAGCTGCTTTCCTGTGGAAATCAATGTCCTAAGCTGCTGTCCTGTGGTCACCGCTGTGAAATCACATGCCATTCTGGGCCTTGTCCTGCTGATGTACTTGATGGAAGAAGCAAAGGTGAAGTGATTCAGTGCCATCAGAAAGTTAGGGTCACTTGTCCATGTGGGCTACTGAAACAAAGGCGTATCTGCAAAGATGTCTTTGTTATTGGGTCTGATGATTCTGCCAAAGGAAGAAAGGATCCCAAATCGCTGGTTTTACTTGAATGTAATGAAGAATGTAGGTTACGTAAAGAAGAAGAAGCCAGGGCAAGAGAAGAATCTGCTGAGAGAAAGAGGCAAGAAGAGGAGAAGAGGAATGCagaagaattagaaaaattcaaattaaaacagGAAGGGAGAAGGGGTCGGACACGCAGGAGGAGAGATAGGGAGGATTTGGAAGATGATGGGAATATCTTTAAACGCCACTGGATCATGATTTCCATTATATTGTCAATTGCAGCAGTTGGCATTGCTGTATTTATGTTGATGGAGACAAATTCAAAGTGA
- Protein Sequence
- MAGRGRGNAWNRGSVTFGSTSSEMKSKPGIKNEKVAGANKVAVDKQAYSSSEEEDDDNNSDDILGKVLQTYAQLGGASHDLGRTQLFLEEVFQSGSATCLICISTVGKNEAIWNCCLCYCFFHLNCLQRWAQESIMHQKRALEEQPLSTAPDFSWSCPKCRHTYPESEIPSKYLCFCSKRVDPPPYSGWHVPHSCGETCGRELTPSCGHSCPLLCHPGPCPPCPRQVTVSCQCGRQPPKAVRCSGKVWSCGQPCRKVLPCNSSQLRIKENAPVGRGRGKFLQHLNETKETKVGRDEEPHLCLEICHSGPCMPCPRKSLQPCCCGKESTLRPCSDADWQCKQVCGKQLECGHHKCNLICHSAKDGCGPCPRSLDRLCACGKASFPGLPCVGGITSEELEVPTCGDTCGKLLACGVHSCARRCHKDDCGACLQMRVQTCRCGQYSKELPCQKEFLCENKCRRTRNCLRHPCSRKCCDGHCPPCDKICSKMLSCGKHRCPAPCHRGPCYPCPLMVTISCPCKSTSIKVPCGQERRIKGDAKRGKGVIVKCRKPCKLPSQCQHPPRPHTCHSGECPSCREICGIVKEGSCGHACSAKCHTSVWVKEEVEAPKKPAGPWEKPQDPKIVKKCLPCPPCTTKVEVICLGGHEKNFQPCHSASPYCCGRECGRLLPCTSHSCTFPCHHVKGGSKDLEHEPALAGKNCESCNNPCLKSRPNGCSHTCPLGKCHPGDCPPCKQNLKQKCHCGLTPSMFIECRKWVAALAEDSKPGKDNSKEISSVEKLLSCGNQCPKLLSCGHRCEITCHSGPCPADVLDGRSKGEVIQCHQKVRVTCPCGLLKQRRICKDVFVIGSDDSAKGRKDPKSLVLLECNEECRLRKEEEARAREESAERKRQEEEKRNAEELEKFKLKQEGRRGRTRRRRDREDLEDDGNIFKRHWIMISIILSIAAVGIAVFMLMETNSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01385401;
- 90% Identity
- -
- 80% Identity
- -