Psmy005457.1
Basic Information
- Insect
- Pachycephus smyrnensis
- Gene Symbol
- gata4
- Assembly
- GCA_030142225.1
- Location
- JARQST010000309.1:2791109-2793932[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-18 5.5e-15 54.8 3.2 1 34 31 63 31 65 0.97 2 2 9.2e-20 2.7e-16 59.0 4.0 1 35 85 118 85 119 0.98
Sequence Information
- Coding Sequence
- ATGGCGTTGGCATCGAtatatgaaaatcgtaaaatgcATCTACAAACAGTGCACAACATCGAAGCGGAGTACTATACGGAGGGCAGGGAGTGCGTGAACTGCGGTGCAATTTCCACTCCGTTATGGCGAAGGGACGGGACCGGCCATTACCTCTGCAACGCCTGCGGACTCTACCACAAGATGAACGGCATGAATCGTCCTCTAGTCAAACAACCACGGCGCCTGTCGGCTTCGCGGCGCGTAGGTCTCTCTTGCAGTAACTGccagacgacgacgacgtcctTGTGGCGTCGCAACATCGCTGGTGAACCCGTATGCAACGCCTGCGGATTGTACTACAAGCTTCACGGCGTTAACAGGCCTCTTGCCATGAAGAAGGATAGCATTCAGACCCGCAAGCGAAAACCCAAGGGCGGGGCGAAGTCGTCGGACACTCCAATATCTGGACCCGTTGCGCCATGCTCTATCAatcacaacaacaacaacaacaataacaataacagtCTGAAGTTAGAACCAGTCTACGCCTGCTGGCATCctcagcaacaacagcaacatcaGCATCTCATCGAAGGCCATTCACCAAAGGTCGAATATCCATCTCCGCCCTGTACCACTCGTTCGCCAGTGTTGGTATCCGCCGGACATTCTCCGGATCATCATCAAATGACATCGCCCCACATCGTCACCCTGGGTAACTCGTCGCCCAGTCCTGCTAGTAGTAAGATCATGATGGACAATGGTCATCTGGAGAGACCCACCGTGGTCTCGATATCGTCCTAA
- Protein Sequence
- MALASIYENRKMHLQTVHNIEAEYYTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLSCSNCQTTTTSLWRRNIAGEPVCNACGLYYKLHGVNRPLAMKKDSIQTRKRKPKGGAKSSDTPISGPVAPCSINHNNNNNNNNNSLKLEPVYACWHPQQQQQHQHLIEGHSPKVEYPSPPCTTRSPVLVSAGHSPDHHQMTSPHIVTLGNSSPSPASSKIMMDNGHLERPTVVSISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00770771;
- 90% Identity
- iTF_00770771;
- 80% Identity
- -