Hnig005121.1
Basic Information
- Insect
- Hartigia nigra
- Gene Symbol
- gata4
- Assembly
- GCA_031001745.1
- Location
- JARPRG010000294.1:2521510-2524414[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-18 4.7e-15 54.9 3.2 1 34 20 52 20 54 0.97 2 2 4.9e-20 1.3e-16 59.9 4.0 1 35 74 107 74 108 0.97
Sequence Information
- Coding Sequence
- atgcATGTACAAACAGTGCACAACATCGAAGCGGAGTACTTTACGGAGGGCAGGGAGTGCGTGAACTGCGGTGCAATTTCCACTCCTTTATGGCGAAGGGACGGGACCGGCCATTACCTCTGCAACGCCTGCGGACTCTACCACAAGATGAACGGCATGAATCGTCCTCTAGTCAAACAACCACGGCGCCTGTCGGCTTCGCGGCGCGTAGGTCTCTCTTGCAGTAACTGccagacgacgacgacgtcctTGTGGCGTCGCAACGCCAGTGGTGAACCCGTATGCAACGCGTGCGGATTGTACTTCAAGCTTCATAGTGTTAACAGGCCTCTTGCCATGAAGAAGGATAGCATACAGACACGCAAGCGAAAGCCCAAGGGTGGCATGAAGTCAACGGACACTGCAATATCTGGATCCGTTGCGCCATGCACTATTAatcacaacaacaacaacaacaacaataataataacagtctGAAGTTAGAACCAGTCTACGCTTGCTGGCATCctcagcaacagcagcaacatcaGCATCTCATCGAAGGCCATTCACCAAAGGTCGAATATCCATCTCCACCCTGTACAACTCGTTCGCCAGTGCTGGTATCCGCTGGACATTCTCCGGATCATCATCAACTGACATCGTCCCATATCGTCACCCTGGGTAACTCGTCGCCCAGTCCTGCTAGTAATAAGATCATGTTGGACAATGGTCATCTCGAGAGACCAACCGTGGTTTCGATATCGTCCTAA
- Protein Sequence
- MHVQTVHNIEAEYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLSCSNCQTTTTSLWRRNASGEPVCNACGLYFKLHSVNRPLAMKKDSIQTRKRKPKGGMKSTDTAISGSVAPCTINHNNNNNNNNNNSLKLEPVYACWHPQQQQQHQHLIEGHSPKVEYPSPPCTTRSPVLVSAGHSPDHHQLTSSHIVTLGNSSPSPASNKIMLDNGHLERPTVVSISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01131233;
- 90% Identity
- iTF_01131233;
- 80% Identity
- -