Pkot000978.2
Basic Information
- Insect
- Pachliopta kotzebuea
- Gene Symbol
- kn
- Assembly
- GCA_018246255.1
- Location
- DWLS01000293.1:1-17407[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-53 1.2e-49 169.9 0.0 11 137 165 281 156 289 0.92
Sequence Information
- Coding Sequence
- ATATTGACTGCTGTGTGTAAAAGTGGCGCCATCTGCGTGAGTCGCGTTGTCCCGCTCGTGAGACGAGGGCGTGTCCCCAGGGCCCCTCCCACAGTCCGCGGGGACGGACGGGGGCGCCGCGAAGCTCGGGCACTCGGCGGCGCGCTCCCGCGACGCTTGTTAGTGTGCCGCAAATCCACAGCGGGATCGCCCGCACAACACCGCCCGGGACAGACATCCCAGTACGCACATACGATAACACAGAGCCGCCTATCGGATGTTCATACAATATCACTCTCACCGCGTTCGTGGTTCGCGATTCGGTCGGACGAGTTGAACGCGGCGGGCGGGTACACGGGCTCGCCGTGGCCGCCGCTGGAACTGGACCCCGTGGGATGGGGACGGAAGCTGTACCCGACGGGAGCGCCGCGGTCCTCAGGTGGACTTATGTTCGGGCTGCACCACCAGGAGGCGGCGGGCGGGCTGCACACGCAACCCCGCGGTCCCGTCACGTCTCTCAAAGAGGAACCCTTGACCCGTGCTTGGATGACACCCGGCTCCCTAGTTGACAATACaaaCAGCGTGGGCGTTGGACGGGCGCACTTCGAGAAGCAACCCCCCAGCAACCTGCGCAAGAGCAACTTCTTTCACTTCGTAGTGGCATTGTACGACCGCGCCGGCCAGCCCGTCGAGATCGAACGCACCGCCTTTATAGGATTTATAGAAAAGGATCAAGAAGCTGAAGGACAGAAAACTAATAATGGAATTCAATATAGACTACAACTACTATATGCAAATGGTATACGACAAGAGCAGGACATCTTTGTTCGTCTCATTGACTCCGTTACCAAGCAGGGAATGAGATTCGCGCAAATCCCATGGAATGGGTGCGCGTTTGAAAAGAGAGGCGCGCGCGTCGCACGTGCCGTACTGATTGTGTTTACTTAA
- Protein Sequence
- ILTAVCKSGAICVSRVVPLVRRGRVPRAPPTVRGDGRGRREARALGGALPRRLLVCRKSTAGSPAQHRPGQTSQYAHTITQSRLSDVHTISLSPRSWFAIRSDELNAAGGYTGSPWPPLELDPVGWGRKLYPTGAPRSSGGLMFGLHHQEAAGGLHTQPRGPVTSLKEEPLTRAWMTPGSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQGMRFAQIPWNGCAFEKRGARVARAVLIVFT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01402533; iTF_00957750; iTF_01337560;
- 90% Identity
- iTF_00957750;
- 80% Identity
- -