Basic Information

Gene Symbol
kn
Assembly
GCA_029286785.1
Location
JAGSMX010000003.1:4928691-4949567[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-42 3.3e-38 131.8 0.0 11 117 147 243 138 259 0.90

Sequence Information

Coding Sequence
ATGTATAGAAGTGGCGCCATCTGCGTCAGTCGCGTCGTCCCGCTCGTGAGACGAGGGCGTGTCCCCAGGGCGCCTCCCACAGTCCGCGGGGACGGACGGGGGCGCCGCGAAGCCCGAGCACTCGGCGGCGCGCTCCCGCGACGCTTGTTAGTGTGCCGCAAATTCACAGCGGGATCGCCCGCACAACCGGGACTGCTATCCCAGTACGCACATACGAAAGCACAGAGCCGTCTATCAGATAGTTATACAATATCCTTCTTGAACGCGGCGGGCGGGTACACGGGTTCGCCGTGGCCGCCGCTGGAGCTCGATCCCGTGGGATGGGGACGGAAACTATACCCGACGGGAGCGCCGAGGTCGTCAGGTGGACTGATGTTCGGGTTGCACCACCAGGAGGCAGCTGGCGGGCTGCACGCCCAGCCCCGCGGCCCCGTCACATCGCTCAAGGAAGAACCCCTGACCCGCGCCTGGATGACACCCGGCTCCCTAGTTGACAATACCAATAGCGTGGGCGTTGGACGGGCGCACTTCGAGAAGCAGCCTCCCAGCAACCTGCGCAAGAGCAACTTCTTCCATTTCGTGGTGGCGCTATACGACCGAGCAGGACAGCCCGTCGAGATTGAAAGGACCGCATTCATTGGATTCATAGAGAAGGATCAAGAAGCCGAAGGACAGAAGACTAACAATGGAATACAATACAGACTCCAACTCCTGTACGCCAATGaTAAGTATAAAGAACTAAATGAAAGGACAGATACAGTCATAGTACACTCTTCAAGCTCAGGCCCATATCTAACAGGGAATGTGGTATCAACATCAAAGAAAAAGAATACAGTGGGTACATTTTTAGGCAAGGCGTTCTAA
Protein Sequence
MYRSGAICVSRVVPLVRRGRVPRAPPTVRGDGRGRREARALGGALPRRLLVCRKFTAGSPAQPGLLSQYAHTKAQSRLSDSYTISFLNAAGGYTGSPWPPLELDPVGWGRKLYPTGAPRSSGGLMFGLHHQEAAGGLHAQPRGPVTSLKEEPLTRAWMTPGSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANDKYKELNERTDTVIVHSSSSGPYLTGNVVSTSKKKNTVGTFLGKAF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01129843;
90% Identity
iTF_01129843;
80% Identity
-