Basic Information

Insect: Oxytorus armatus
Gene Symbol: su(Hw)
Assembly: GCA_958009045.1
Location: OY253746.1:35226999-35239401[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.007 0.63 10.8 0.1 1 20 34 53 34 55 0.93

2 13 3e-06 0.00028 21.4 0.7 1 23 125 148 125 148 0.95

3 13 0.00044 0.039 14.6 4.4 2 23 155 177 154 177 0.95

4 13 0.00049 0.044 14.5 2.6 1 20 183 202 183 204 0.95

5 13 5.9e-09 5.3e-07 29.9 2.0 1 23 215 237 215 237 0.99

6 13 1.5e-05 0.0014 19.2 1.3 2 23 247 268 246 268 0.97

7 13 0.0033 0.3 11.8 0.4 2 23 275 296 274 296 0.97

8 13 7.2e-06 0.00065 20.2 4.7 1 23 302 324 302 324 0.99

9 13 0.00017 0.016 15.9 1.5 1 23 330 352 330 352 0.95

10 13 1.5e-05 0.0014 19.2 1.3 1 23 358 381 358 381 0.95

11 13 1.6e-07 1.4e-05 25.5 1.2 1 23 387 409 387 409 0.98

12 13 1.9e-06 0.00017 22.1 3.8 1 23 415 437 415 437 0.98

13 13 2.2e-05 0.002 18.7 3.1 2 23 444 466 443 466 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.007	0.63	10.8	0.1	1	20	34	53	34	55	0.93
2	13	3e-06	0.00028	21.4	0.7	1	23	125	148	125	148	0.95
3	13	0.00044	0.039	14.6	4.4	2	23	155	177	154	177	0.95
4	13	0.00049	0.044	14.5	2.6	1	20	183	202	183	204	0.95
5	13	5.9e-09	5.3e-07	29.9	2.0	1	23	215	237	215	237	0.99
6	13	1.5e-05	0.0014	19.2	1.3	2	23	247	268	246	268	0.97
7	13	0.0033	0.3	11.8	0.4	2	23	275	296	274	296	0.97
8	13	7.2e-06	0.00065	20.2	4.7	1	23	302	324	302	324	0.99
9	13	0.00017	0.016	15.9	1.5	1	23	330	352	330	352	0.95
10	13	1.5e-05	0.0014	19.2	1.3	1	23	358	381	358	381	0.95
11	13	1.6e-07	1.4e-05	25.5	1.2	1	23	387	409	387	409	0.98
12	13	1.9e-06	0.00017	22.1	3.8	1	23	415	437	415	437	0.98
13	13	2.2e-05	0.002	18.7	3.1	2	23	444	466	443	466	0.95

Sequence Information

Coding Sequence: ATGGAACGTGCCGAGCTGGAGAACGCCGAGGTGGCTGGGGATGATGACGAGGAAGAGGTTGCGGAGAACACGACTGACAGTATTCCAATGACAACCAATTATCAATGCGTAACGTGTCAacggatttttcaaaattccaacTTGCTGAGCGATCATCTGATTGTCTGCCGTGAAGAAGACGACAGCACTGATATATTGGAGTTAAAGACTTTCAATGAGTATGACACTGATGATTCCGAAGAATATGACGATTCCGACACTGGAAACGAAAATATCAATGACGCGAGTGGATCAACATCGATACAGCCAGTTGCAGAAAACGAGTGTCATTGTTGCGGtgaagatttgaaaaatgctCACGCGGGTGGTCCATTTAAATGTACAAATTGTGATCTATCGTTCAAAAAACGTTCGTCACTCGAGAGGCACGCGATCGTTATACATTGGGAAATTGAAGCGTGCACCTGCAGCGATTGCGGATCGACATTTCGTGATAAAAAATCACTCGACAAACACAGATACACGACCCATTCCAATGCCAAGATTTACAAATGCGAGCCTTGCGACAGGTACTTCACTCGTCGTTATCATTTAAATCGGCACAAATTGCAGTCCGGTTGTCACGGCACGCTGCGCAATTTTTACGAATGTCAAGTCTGCAACAAAACGTTCACGCGAAAAGATAATCTTCGAGAACATTTGCGGACTCACGCTGGTGTTACGCAGAGACAACAAAAATCGTGCTCGCAGTGTGACAAAAAATTTAGTACGCCGCAACAACTTCTTATACACAGTCGTATGCACAGTGGCGAACGACCTGTTAAGTGTGACTTGTGTCCAAAGACATTTTTATCCGCACTGGCGATGAAAAAACATCGTCGTGTGCACACCGGTGAGAAACCATTTCAGTGCAAACACTGTCAACGTAAATTCGCGgctcgtgaaactttgaatcgtcATCAAAGAACGCACACCGGCGAGAGACCGCACGTTTGTCAATATTGCGCGAAAGCTTTCATCCAAGCGGCTCAATTGAAAGCCCATCTGTTTCATCATACGGGAGAGAATGGATTTTACTGCGAGACTTGCGGGAAAGCGTTCAATCGAAAGGCACGCTTGAACTTGCACATCAAATTTACCCACGAGGGAGCGGTCGGCTTTCAGTGTGACGTTTGCAGTAAATCCTTCTCGCGCAAGGAGGATCTAACTAAACACACTCTCATACACTCGGGAATAAAACCTCACAAATGCGACAAGTGCGAGAAAGCTTTTGCGACAAAATCATCACTACACGCTCATCTGAATACTCACAGACGCGAGCCACCCCAGTCCTGCACCGAATGTGGACGTGCATTTATCCGTCACGATTGTCTCATGAGACACATCAGGGCGAAGCATCGCGATGTTCTCGAGGATGTTATGGCGGAAGCGGAAAAACGACAGTTGCAGACGCAATTGCTCGATATAGCGTCGTCAGCCGCGTTAAAAATTCAATCTGGCGAATCAAGTGCACTTTCCTCGGCTCAGTTACTAAAAGCCATTGCCGATCTTCTGACGATTCTCATTGAGGAAGATACTTTGCAGGTATTTGGATGGCCCGAAGCACCGATACAAGACGTTCTGGACGCTGTAATTAAACGATGCGGTCATCAGCCAATAACGGTGGAGGACAGTGAATTAATATTCGAGGAACGATTACGGGAGAACGTCAAGCTTTTATTCACCGTTGTTATAGACGACGATACCGTGAAATCGCTGCTCACGACTCAGACTGTCGACGAAGTCATTTTGCATGtactaaaaatgtcgaaatcaTAA
Protein Sequence: MERAELENAEVAGDDDEEEVAENTTDSIPMTTNYQCVTCQRIFQNSNLLSDHLIVCREEDDSTDILELKTFNEYDTDDSEEYDDSDTGNENINDASGSTSIQPVAENECHCCGEDLKNAHAGGPFKCTNCDLSFKKRSSLERHAIVIHWEIEACTCSDCGSTFRDKKSLDKHRYTTHSNAKIYKCEPCDRYFTRRYHLNRHKLQSGCHGTLRNFYECQVCNKTFTRKDNLREHLRTHAGVTQRQQKSCSQCDKKFSTPQQLLIHSRMHSGERPVKCDLCPKTFLSALAMKKHRRVHTGEKPFQCKHCQRKFAARETLNRHQRTHTGERPHVCQYCAKAFIQAAQLKAHLFHHTGENGFYCETCGKAFNRKARLNLHIKFTHEGAVGFQCDVCSKSFSRKEDLTKHTLIHSGIKPHKCDKCEKAFATKSSLHAHLNTHRREPPQSCTECGRAFIRHDCLMRHIRAKHRDVLEDVMAEAEKRQLQTQLLDIASSAALKIQSGESSALSSAQLLKAIADLLTILIEEDTLQVFGWPEAPIQDVLDAVIKRCGHQPITVEDSELIFEERLRENVKLLFTVVIDDDTVKSLLTTQTVDEVILHVLKMSKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00414496;
90% Identity: iTF_01306681; iTF_00629276;
80% Identity: -