Oarm011475.3
Basic Information
- Insect
- Oxytorus armatus
- Gene Symbol
- Hr39
- Assembly
- GCA_958009045.1
- Location
- OY253750.1:8043170-8049930[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.12 6.1e+02 -0.2 5.0 45 163 210 325 178 346 0.69 2 4 4 2.1e+04 -7.7 9.2 80 140 391 428 332 467 0.39 3 4 7.4e-08 0.00039 20.2 0.0 1 21 533 553 533 557 0.92 4 4 4.4e-72 2.3e-68 231.7 0.0 97 408 594 908 563 908 0.79
Sequence Information
- Coding Sequence
- ATGTCGGATCAAAACGGGCCCACGGAGGGCCCGGGCTGGTGGCCTCCGGCACAATCATGGAAGTCAACCGCAAACACgtcctcgtcatcgtcatcgtccaCGATTCCATCGTCCCGCACGCTCGAGGCtggaaaaaatatttccgtCACGACGATCAATGTGCCACCGTCCCAAGAGATGCACGATGGTAAAAGCGTGTGTAAATACCTGGGAGGACAGAACGGCGTGACCGTATCAGTGGTTTCGAGTTGCGGAAGTGGTCCAGGCAGCGGTATGGGTACAGGACccggaggaggaggaggtggaGGCTGTGGTGCATCCTCCTCGTGTCCAGAATCAAGTTGCCTCGATGATCTCGAGGACAGCGACGGTGAAGTTAGCAAGATCGATTTTCGCGGCGTTAATCTACGAACCAAGAAGAAACGCGATGCATCGGGTGGATCGGAGAACGAGTGCGGCGCCGTGGGCGCCGACAATCTCGAGCAACAGCAACCCGAGAGACCGATGTCATGGGAGGGCGAGTTGTCCGATCAGGAAATGTCTTCAAACCCGATAACCAATCAGCAGGATCACGAGGAAACATCAATGGAGGGTGTTCAGGTGTGCGGCGCGAGTCCCGGACCTCAGGAGCAAAAGTTTCCGATAAAACCGGAGCCCGATTTTCGATCGAGTCCGGGTCTGATAATTGGTTCGCACAATGACGGGAGTTTGCCACTATCTCACGTACAACAGTTACAGCAACAACAGCGTGGCATTGACGCCCACGAGCAGACGCAACAGAGTGACTTACCGTTGCTCGTTGGAAAATTACTCGGTGGTTACAACAGTTCAACGCCGAATCACAGTCCGATATTGAATCCGCGCCATCATCTAACGAAACACAGTCACACGAGATCGCAAGTGCCGTCGCCCGATTCGGCGATACATTCGGCGTACAGTGTCTTCAGTTCGCCGACGCAGAGTCCGCACGCTGCGCGTCATTCGGCCCTCGGTGCCGGAAGTCCCGTGCCATCGTCATCTCTCTCGTTGTCCCGTCACAGTTTCAACAATTCCACGTCCTCCCTCTCGTTGTCACTGTCACACTCGTTGTCGCGCAACAATTCCGACGCTTCGAGCAGTTGTTACAGCTACGGTTCGTTGAGTCCACCGACTCACTCGCCCGTACAACAGCCGAGACATTCTCACcaacaacaacagcaacagcaacaacaaattccgcaggGTGGTAGTCCGTTGCATCTGCCGTCGTCGACAGCGACGAATCCGCACAGTTATTCGACCCAGGGTTCCGAAATATCGTCCGAGGGCCATCCGGAGGATCAGGACGATTGCAAACTACCAACAGCCACGTCGGGCATATCAACGAGGCAACAGTTAATAAACAGTCCTTGTCCGATATGCGGTGATAAGATAAGCGGCTTTCACTATGGTATATTCTCTTGCGAGTCTTGCAAAGGTTTCTTCAAGCGTACCGTGCAAAATCGTAAGAATTACGTTTGCCTGAGAGGCGCCGGTTGTCCGGTCACCGTagcgacaagaaaaaaatgtcccgcCTGTCGTTTCGACAAGTGTCTCAATATGGGAATGAAACTTGAGGCTATAAGGGAGGATAGAACGCGCGGCGGTAGAAGCACGTATCAGTGCACTTATACCCTACCAGCGAATTTAATCGGCGGTACGACAGGCGGTATGACGGGTGACAAGATGACCGGTGGTAATTGTAGTCCGGCGCCACCTGGCTCCGAACATCATCATTCGGCCCGACATCATTGGAATCATTCGCACAAAATTCAAGTTGTACCGCAATTGTTGCAAGATATCATGGACGTTGAACATCTGTGGCACTACAATGACAATGATCGCGTTAGCGGCGGTGGTCAAGGTGTCAGTGGCGTTGGACACTCGGGCAATGGCTCGTCAATGTCGAACGAGATGACCGGCGGCGTTGTTTCCAGTGCTGGCAGTGGAAATTTAACGAGTAACGGCAACGTTGATAATCTTTCGGATACAACGAGATCAACCGGCACCGGTACGCCGGTCAATAACGAGCATCAGCAACAAAATTCATCGACAAATAATTCAACGAACGGTAGTAATACAAGCGCAAATCCCAATGGCAATGGAACGCAAAATCCTGATTTTCTCTCGAATCTTTGCAACATCGCCGATCATCGATTGTATAAGATCGTCAAGTGGTGCAAGAGTTTGCCGCTATTCAAAAATATCTCCATTGACGATCAGATATGCCTGTTGATTAATTCGTGGTGCGAATTATTGTTGTTCTCGTGCTGTTTTCGTAGTATGAGCACACCCGGCGAAATAAGAGTATCGCTCGGCAAGTCAATTACCCTTGAACAAGCGAGACAATTGGGTCTTGCGACGTGCATCGAGAGAATGCTTGcttttacgaacaatttgcGAAGACTCAGGGTCGATCAGTACGAGTATGTGGCGATGAAggtcATTGTTCTCCTTACATCGGACACGAGCGAGCTCAAGGAACCCGAGAAAGTTCGAGCGTCACAGGAGAAAGCCCTTCAGGCTCTTCAGCAGTACACGATCGCGAGGTATCCGGAAATGCCGGCGAAATTTGGGGAACTTCTGCTTCGAATACCCGATTTACAGAGAACTTGTCAGGCTGGAAAAGAATTGTTGAGTGCTAAACGAGCCGAGGGTGAAGGCAGCTCTTTCAATTTGTTGATGGAATTGCTGAGGGGTGATCACTGA
- Protein Sequence
- MSDQNGPTEGPGWWPPAQSWKSTANTSSSSSSSTIPSSRTLEAGKNISVTTINVPPSQEMHDGKSVCKYLGGQNGVTVSVVSSCGSGPGSGMGTGPGGGGGGGCGASSSCPESSCLDDLEDSDGEVSKIDFRGVNLRTKKKRDASGGSENECGAVGADNLEQQQPERPMSWEGELSDQEMSSNPITNQQDHEETSMEGVQVCGASPGPQEQKFPIKPEPDFRSSPGLIIGSHNDGSLPLSHVQQLQQQQRGIDAHEQTQQSDLPLLVGKLLGGYNSSTPNHSPILNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHQQQQQQQQQIPQGGSPLHLPSSTATNPHSYSTQGSEISSEGHPEDQDDCKLPTATSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGGTTGGMTGDKMTGGNCSPAPPGSEHHHSARHHWNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRVSGGGQGVSGVGHSGNGSSMSNEMTGGVVSSAGSGNLTSNGNVDNLSDTTRSTGTGTPVNNEHQQQNSSTNNSTNGSNTSANPNGNGTQNPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00059522;
- 90% Identity
- iTF_01129414;
- 80% Identity
- iTF_01129414;