Opom000276.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oxystoma pomonae
Gene Symbol
Hnf4
Assembly
GCA_963921995.1
Location
OY998163.1:9525999-9541501[-]

Transcription Factor Domain

TF Family
ESR
Domain
zf-C4|ESR-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
This entry represents CLAVATA3/ESR (CLE)-related protein 14 from Arabidopsis thaliana (CLE14) and similar proteins predominantly found in plants. CLE14 is an extracellular signal peptide that regulates cell fate. It represses root apical meristem maintenance and functions as an elicitor of the root meristem differentiation through the CLV2/CRN complex signalling pathway. This protein inhibits irreversibly root growth by reducing cell division rates in the root apical meristem [1, 2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 2.3e-30 2.5e-26 94.2 1.0 79 268 23 209 6 213 0.94
2 6 1.7e-06 0.019 15.9 0.1 180 268 268 353 266 357 0.92
3 6 1.1e-06 0.012 16.5 0.1 189 268 360 436 353 440 0.92
4 6 4.5e-07 0.005 17.8 0.0 189 268 443 519 436 523 0.92
5 6 8.1e-08 0.00089 20.3 0.2 180 268 515 602 513 606 0.93
6 6 0.00031 3.4 8.5 0.0 189 250 609 667 602 675 0.86

Sequence Information

Coding Sequence
ATGGGCACCACTCCAGTCAACAACGATTTGGACTTATCCAACAGGCAGCTGGCGAACATTGACGACATCTGTGATTCGATGAAGCAGCAACTTTTAATTCTAGTCGAATGGGCCAAGTATATTCCCGCTTTTACCGAGTTACAGTTAGACGACCagGTAGCGTTACTGAGGGCGCACGCAGGAGAGCACCTTTTACTAGGCTTGGCACGGCGGTCGATGCATCTCAAAGAAGTCTTACTCCTAGGAAATAATTGTATCATAACGAAACAGTGTCCTGatCTGAGCATAGCCCGAGTAGGAACCAGAATTATGGACGAATTAGTCCGACCAATGACTGACGTTCAGATCGACGATACAGAGTTCGCCTGTTTAAAAGCTATAGTTTTTTTCGACCCAAATGCCAAAGGTCTAAACGAGCCGGCCCGCATCAAGCAACTGCGCTACCAAATCCAAATAAACCTAGAAGACTACATCAGCGACAGACAGTACGACAGCCGGGGTCGCTTCGGCGAGTTGCTCCTGACGTTGCCGCCTCTCCAATCGATAACGTGGCAGATGATCGAGCAGATACAGTTCGCGAAGCTGTTCGGGGTGACGCACATTGACAGCTTGTTGCAAGAAATGTTGCTTGgagaagttaaaaaacctccgaatcagttacttcaaccggcCCGCATCAAGCAACTGCGCTACCAAATCCAAATAAACCTAGAAGACTACATCAGACAGTGGATAACGTGGCAGATGATCGAGCAGATACAGTTCGCGAAGCTGTTCGGGGTGACGCACATTGACAGCTTGTTGCAAGAAATGTTGCTTGgagaagttaaaaaacctccgaatcagttacttcaaccggcCCGCATCAAGCAACTGCGCTACCAAATCCAAATAAACCTAGAAGACTACATCAGACAGTGCGACAGCCGGGGTCGCTTCGGCGAGTTGCTCCTGACGTTGCCGCCTCTCCAATCTATAACGTGGCAGATGATCGAGCAGATACAGTTCGCGAAGCTGTTCGGGGTGACGCACATTGACAGCTTGTTGCAAGAAATGTTGCTTGGAGaagttaaaaaaccttcgaatcagttacttcaaccggtCCGCATCAAGCAACTGCGCTTCCAAATCCAAATAAACCTAGAAGACTACATCAGCGACAGACAGTACGACAGCCGGGGTCGCTTCGGCGAGTTGCTCCTGACGTTGCCGCCTCTCCAATCTATAACGTGGCAGATGATCGAGCAGATACAGTTCGCGAAGCTGTTCGGAGTGACGCACATTGACAGCTTGTTGCAAGAAATGCTGCTTGgagaagttaaaaaacctccgaatcagttacttcaaccggcCCGCATCAAGCAACTGCGCTACCAAATCCAAATAAACCTAGAAGACTACATCAGCGACAGACAGTACGACAGCCGGGGTCGCTTCGGCGAGTTGCTCCTGACGTTGCCGCCTCTCCAATCGATAACGTGGCAGATGATCGAGCAGATACAGTTCGCGAAGCTGTTCGGAGTGACGCACATTGACAGCTTGTTGCAAGAAATGTTGCTTGgagaagttaaaaaacctccgaatcagttacttcaaccggcCCGCATCAAGCAACTGCGCTACCAAATCCAAATAAACCTAGAAGACTACATCAGCGACAGACAGTACGACAGCCGGGGTCGCTTCGGCGAGTTGCTCCTGACGTTGCCGCCTCTCCAATCGATAACGTGGCAGATGATCGAGCAGATACAGTTCGCGAAGCTGTTCGGAGTGACGCACATTGACAGCTTGTTGCAAGAAATGTTGCTTGgagaagttaaaaaacctccgaatcagttacttcaaccggcCCGCATCAAGCAACTGCGCTACCAAATCCAAATAAACCTAGAAGACTATATCAGCGACAGACAGTACGACAGCCGGGGTCGCTTCGACGAGTTGCTCCTGACGTTGCCGCCTCTCCAATCGATAACGTGGCAGATGATCGAGCAGATACAGTTCGATACAAGACGGGTTAGATTAGGTGGAATGGAAAACAGCATAGTCGTTCCCGGAACGACAATGGGGGTGCAGCAACAGCAGCCGCAACAGCTCAACAACAACAGCTACCAGGGTGCCGTCAGCGACTCGACCGACAGTCCGGTGTTGTCGCCCATGACTACACCCAACAGCCCCGATCAGCTGATTAACGGCGGCGGCGTTGCCAGCCCGCAGTCCAATTCTAGCGTTTTAATTATGCGAGATCTTGGTGgaATAGACGAAACATTCGCAATGCCTTTCAAACATGAACCTATCAAGGAAGAACAACACACTTACTAA
Protein Sequence
MGTTPVNNDLDLSNRQLANIDDICDSMKQQLLILVEWAKYIPAFTELQLDDQVALLRAHAGEHLLLGLARRSMHLKEVLLLGNNCIITKQCPDLSIARVGTRIMDELVRPMTDVQIDDTEFACLKAIVFFDPNAKGLNEPARIKQLRYQIQINLEDYISDRQYDSRGRFGELLLTLPPLQSITWQMIEQIQFAKLFGVTHIDSLLQEMLLGEVKKPPNQLLQPARIKQLRYQIQINLEDYIRQWITWQMIEQIQFAKLFGVTHIDSLLQEMLLGEVKKPPNQLLQPARIKQLRYQIQINLEDYIRQCDSRGRFGELLLTLPPLQSITWQMIEQIQFAKLFGVTHIDSLLQEMLLGEVKKPSNQLLQPVRIKQLRFQIQINLEDYISDRQYDSRGRFGELLLTLPPLQSITWQMIEQIQFAKLFGVTHIDSLLQEMLLGEVKKPPNQLLQPARIKQLRYQIQINLEDYISDRQYDSRGRFGELLLTLPPLQSITWQMIEQIQFAKLFGVTHIDSLLQEMLLGEVKKPPNQLLQPARIKQLRYQIQINLEDYISDRQYDSRGRFGELLLTLPPLQSITWQMIEQIQFAKLFGVTHIDSLLQEMLLGEVKKPPNQLLQPARIKQLRYQIQINLEDYISDRQYDSRGRFDELLLTLPPLQSITWQMIEQIQFDTRRVRLGGMENSIVVPGTTMGVQQQQPQQLNNNSYQGAVSDSTDSPVLSPMTTPNSPDQLINGGGVASPQSNSSVLIMRDLGGIDETFAMPFKHEPIKEEQHTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01128481;
90% Identity
iTF_01128481;
80% Identity
iTF_01128481;