Opom019795.1
Basic Information
- Insect
- Oxystoma pomonae
- Gene Symbol
- tfip11
- Assembly
- GCA_963921995.1
- Location
- OY998167.1:35640715-35663239[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-91 5.7e-87 293.1 10.7 1 275 339 612 339 612 0.97 2 2 0.36 5.3e+03 -2.0 0.1 157 190 624 656 618 666 0.72
Sequence Information
- Coding Sequence
- ATGGGTGGCGTTCATCAGGTGGGCAAAAAGAAGAAACAGGaagagaaaaaagaagaaataaaaatggaatCTGAAGAGAGCGATGATGAGAAGCCCTCAACTTCATTTAAAACAAGAGACAGCTCTGATTCTGATGATGATATGGCTCCACGAGCAGgttttggaAAATCTCGTTCAAAAATGACATCCACACAATCCACAGTCACAGAGATAACAGCTGATATAGCTGGCTTTAGAACAAGAAACCAAGTCGACAAGTCTTTGATGAATCAAGGAGTGGGAAATTGGGAAAAGCACACTAAAGgtATTGGTGCAAAACTTCTACTTCAAATGGGTTTTGAACCTGGCAAAGGTCTGGGGAAAAGCCTGCAAGGTATTTCAGCTCCTGTTGAGGCACATCTAAGGAAAGGCAGGGGAGCTATTGGAGCCTATGGCCCAGAGAAGCCAGCTAGCATTGCGCAAGTCAAACCAAAAGAATCCAAAATAAAATCCGAACTGAAAGAAGAAGACAGCATTAAAAGTTTCAGATGGAAGCGGGACGATGTCCCGTCCAAACACAAGTCCCGTTACTACTACCGTAGTGTAGACGAAGTAAttgaaaaaggtaaaaagccaGGAAGTTATAGAAATACTGGAATCACAAGTGAAATGGCTAAAGTTAAGGTGATCGACATGACAGGACCACAGCAGCGTGTTTTAAGCGGGTACCACGCCCTTAGCGGGCTCAAAGCCCCACCAGGAGCTGAACATTACGAGGACGTTGTCCGaaagaaatgtcaaaatttcgCGCTACCAGAGATACAGCATAATTTGGATTTGCTTGTGGATATGTGCGAACAGgataTTATAAGAATCGATAGAAACACCCGAAATAACCAAGACAGAATTACAGTTTTGAAGCAAGAAGAGGAAAATATTAGGTTATGCATAAAAAAGGAGGACCAGACAACAGAAAACCTAAAAAACATCTTGGAAATCGTGGATCAACTGATGGACCCCACTCAGGATTATTCTTTGGGACAAGttggacaaatttttaaagatctttTGAAAAACCATGCCGACGAATACTGCTCTTACGAGTTGGGCGAACTGGCCCCGGGCCTGGTGGGCCCCCTCCTCACCTCCGCCCTGGCCAGTTGGAACGCGCTAGCGCTGCCCAATCAGTACACCGAATTCTTCGCGCAATGGAAAGAGCTGTTGGAGGAGCCGCAGAAGCGCAACGGGAACTTCTTTGAAGGTAATAAAGCTGGTATTCGGCCGTACGATAGCCTCATTTGGCACACTTGGGTGCCGGTAATGAGGTCTTGCATAAGtgcATGGAATCCAAGAGATTGCGACCCGATGATAAACTTGATGGAAGCGTGGAAGGACCTGTTACCAGTTTGGATTTTAAGCAACGTCTACGATCAGATGATCATGCCTAGAATTTTGGCGGAGGTGAACAGCTGGAACCCGCTCACAGACACTATACCCATACATTTGTGGATACACCCATGGATCCCCTTGTTAGATGACAAACTTCAAGAGAAGATCTACCCAATAATCACGGACAAACTGGGTGCCGCTCTTACGAACTGGCACCCGTCGGACGGATCCGCCAAGCTGATGCTCCAGCCTTGGGCCAGGGCCCTGTCGAAGGGCACCTATTCCGCCTTTCTACTCAAACACATTGTCCCCAAATTGCAGTTGTGCATGCAAAACATGGTCATTAACCCACATCAGCAATTGCTCGATCCTTGGAATTGGGTCATGGACTGGACGGACATGCTAACGCTCACCAACATAACCCTGATTCTGGACAAGTACTTTTTCCCGCGGTGGCTACAGACTCTTGCCATGTGGCTCAACCACAATCCCGACTACAATCAAGTGACCGAGTGGTATTCGGGTTGGAAACGGATGGTGTCTGAAGAGTTGCAGCAACAGCCCACTATTAAAGATAGTTTTCATAAGGCCCTGGAAATGATGAGTAGAGCTGTCAACATTATCAGTCAACCAGGCGCCAAGGAATCGATCATATACCTATCAAACGCGGACGCGTTAACTAAACCGCCCCCTCCGCCTCCACCTCGAGTTGAGAGCATAGCCGAAGCCGTGCGTACCGCGTCCAAAATCCCCCAGGGCTTCAAAGATTTGGTGACGAAACGGTGCGAGGAGCGCGGCATAATTTTCGTGCCGCTCCCCAACAAGTTCCGAGAGGCGAAGCAGGTGTACAAAATAGGCTCCAATGGGGTACAGTGCTACATAGATAGGAACGTCATATTTTACACGGAAAATAACCAAACGTGGATCCCGACGTCTTTGAATCGGTTACTAGATATGGCGTGA
- Protein Sequence
- MGGVHQVGKKKKQEEKKEEIKMESEESDDEKPSTSFKTRDSSDSDDDMAPRAGFGKSRSKMTSTQSTVTEITADIAGFRTRNQVDKSLMNQGVGNWEKHTKGIGAKLLLQMGFEPGKGLGKSLQGISAPVEAHLRKGRGAIGAYGPEKPASIAQVKPKESKIKSELKEEDSIKSFRWKRDDVPSKHKSRYYYRSVDEVIEKGKKPGSYRNTGITSEMAKVKVIDMTGPQQRVLSGYHALSGLKAPPGAEHYEDVVRKKCQNFALPEIQHNLDLLVDMCEQDIIRIDRNTRNNQDRITVLKQEEENIRLCIKKEDQTTENLKNILEIVDQLMDPTQDYSLGQVGQIFKDLLKNHADEYCSYELGELAPGLVGPLLTSALASWNALALPNQYTEFFAQWKELLEEPQKRNGNFFEGNKAGIRPYDSLIWHTWVPVMRSCISAWNPRDCDPMINLMEAWKDLLPVWILSNVYDQMIMPRILAEVNSWNPLTDTIPIHLWIHPWIPLLDDKLQEKIYPIITDKLGAALTNWHPSDGSAKLMLQPWARALSKGTYSAFLLKHIVPKLQLCMQNMVINPHQQLLDPWNWVMDWTDMLTLTNITLILDKYFFPRWLQTLAMWLNHNPDYNQVTEWYSGWKRMVSEELQQQPTIKDSFHKALEMMSRAVNIISQPGAKESIIYLSNADALTKPPPPPPPRVESIAEAVRTASKIPQGFKDLVTKRCEERGIIFVPLPNKFREAKQVYKIGSNGVQCYIDRNVIFYTENNQTWIPTSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00169366;
- 90% Identity
- -
- 80% Identity
- -