Opun020728.1
Basic Information
- Insect
- Othius punctulatus
- Gene Symbol
- -
- Assembly
- GCA_951805005.1
- Location
- OX638140.1:41934421-41934723[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-09 2.8e-06 28.7 0.0 2 34 19 51 18 58 0.89
Sequence Information
- Coding Sequence
- ATGCCAAGAGTGTATAAAAGAAAACTAGGCTCTCGggcttatcaaaattatacccaAGAAACTTTGCAACAATGTTTAGAAGCAGTTAGAAGTAAACGAATGACGCAGAGAAAAGCCGCACAAGAGTTTAAAATTCCGCTGCGAactatcattaataaacttaaagTCAATCTACTTGAAAAGCCTGGAAGACCCACGATATGTTCCGAGGAAGAAGAAACTGGATTTGTAAACTGTATATTAGCCTTCAGCAGATTTGGTTTCCCACTAGACTCTTTTGATTTGCGCAtgattgtgaaataa
- Protein Sequence
- MPRVYKRKLGSRAYQNYTQETLQQCLEAVRSKRMTQRKAAQEFKIPLRTIINKLKVNLLEKPGRPTICSEEEETGFVNCILAFSRFGFPLDSFDLRMIVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01126292;
- 90% Identity
- iTF_01126280; iTF_01126289; iTF_01126282; iTF_01126319; iTF_01126294; iTF_01126320;
- 80% Identity
- -