Opun045469.1
Basic Information
- Insect
- Othius punctulatus
- Gene Symbol
- -
- Assembly
- GCA_951805005.1
- Location
- OX638144.1:31918156-31918470[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-09 1.2e-06 30.0 0.0 2 32 19 49 18 56 0.93
Sequence Information
- Coding Sequence
- ATGCCAAGAGTGTATAAAAGAAAACTAGGCTCTCGggcttatcaaaattatacccaAGAAACTTTGCAACAATGTTTAGAAGCAGTTAGAAGTAAACGAATGACGCAGAGAAAAGCCGCACAAGAGTTTAAAATTCCGCGGCGAACTACcattaataaacttaaaagCAATCTACTTGAAACGCCTGGAACACCCACGACATTTTCCGAGGAAGAAAAAAAAGGATTTGTAAACTGTATATTAGCCTTCAGCACATTTGGTTTCCCACTAGACTCTTTTGATTTGCGCAAGATCGTGAAATCATTCTTGAGCTGA
- Protein Sequence
- MPRVYKRKLGSRAYQNYTQETLQQCLEAVRSKRMTQRKAAQEFKIPRRTTINKLKSNLLETPGTPTTFSEEEKKGFVNCILAFSTFGFPLDSFDLRKIVKSFLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01126320; iTF_01126282; iTF_01126317; iTF_01126319; iTF_01126294; iTF_01126296; iTF_01126289; iTF_01126280;
- 90% Identity
- -
- 80% Identity
- -