Basic Information

Insect: Ostrinia nubilalis
Gene Symbol: THAP3
Assembly: GCA_963855985.1
Location: OY979762.1:5591878-5622284[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 5.8 5.2e+02 2.4 0.2 1 20 355 374 355 377 0.74

2 11 0.0023 0.21 13.0 1.2 1 23 384 407 384 407 0.93

3 11 0.46 41 5.8 0.2 1 23 411 433 411 433 0.92

4 11 0.005 0.45 12.0 1.0 1 23 438 461 438 461 0.98

5 11 0.0016 0.14 13.6 0.7 1 23 465 488 465 488 0.97

6 11 3.5 3.1e+02 3.1 0.5 3 21 502 520 501 521 0.86

7 11 0.19 17 7.1 0.2 2 23 574 596 573 596 0.96

8 11 0.011 1 10.9 0.5 2 20 612 630 611 633 0.92

9 11 2.3e-05 0.002 19.4 2.5 1 23 639 661 639 661 0.99

10 11 0.00014 0.013 16.9 2.7 1 23 668 690 668 690 0.98

11 11 0.00013 0.012 17.0 2.2 1 23 696 719 696 719 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	5.8	5.2e+02	2.4	0.2	1	20	355	374	355	377	0.74
2	11	0.0023	0.21	13.0	1.2	1	23	384	407	384	407	0.93
3	11	0.46	41	5.8	0.2	1	23	411	433	411	433	0.92
4	11	0.005	0.45	12.0	1.0	1	23	438	461	438	461	0.98
5	11	0.0016	0.14	13.6	0.7	1	23	465	488	465	488	0.97
6	11	3.5	3.1e+02	3.1	0.5	3	21	502	520	501	521	0.86
7	11	0.19	17	7.1	0.2	2	23	574	596	573	596	0.96
8	11	0.011	1	10.9	0.5	2	20	612	630	611	633	0.92
9	11	2.3e-05	0.002	19.4	2.5	1	23	639	661	639	661	0.99
10	11	0.00014	0.013	16.9	2.7	1	23	668	690	668	690	0.98
11	11	0.00013	0.012	17.0	2.2	1	23	696	719	696	719	0.93

Sequence Information

Coding Sequence: ATGCGGTGCAGCGTTCAAAATTGCTCCAATGACACGAGGCGGAAGACAAAAACTAATGGACTCACGTTCCATGTGTTCCCTCGCGAGCCACAGCTGCGTCATGCCTGGATCGAAGCCCTCGGCATGTCAGAGTGGGAGCCGAAAGACAGAAGCACTGTGTGCTCCGAACACTTTCGAAACAGCGACTTCTATGAGACCAAATGTGGGCTCCGGAGGATAAAGAACGGAGCTGTGCCAGTCCTGGGCCTTGTGTGCAGAATTTGTTTATCCATGGGTGTGAAAATGTATGACATGTTTGATTACCAACTGGGCGAGATCTACCAACAACTGACTGACACTGAATGGAGCGACAAAGACGAGCTGCCGCAGAAGCTATGCTGGGAGTGTGCGGCCAGACTGGCATCGTGTGCCAAGATGAGAAGCAGGGCTCTCAGGAGTCATAAGCTGATGATGGACGTGTTAAATTCCACATCCCCTATCACAGTGAAAGACGTGAAGTCAATAAGCCGGTCAACCTACGAACTGCAGTCTAGTCTCATACAAAAAGTGTATGAGCCTAACGAGTGCGACATGTATTGGCAAGAGACATGCGAGCCGAGTTTGCCTGTATTCTTGGCTGAAGAGAAGGAAGAAAATATTAAGGCGGAGTCCCCGGTCGGATGCGCCGCAAGCCCGCTGCCCGAGCTGCCTCCAAGCGTTCAAGTTAAAGACGAAAGCACAGAAATATACTTCGACGAGTTTAACGACAATACTGACCAGTTTCAAGATCATTTCAACGAATCGGACGACAACGTGAAACTTAGTGAAGTAGCCGAAAAGCCTAaagtaaagaagaaaaaagtcaaaatagaaaaagaaaagaaaccAAAAGAACGGAAGAAAAAAGACGACGAGGAAAACCCGGTGGAAACTATGGACAAATACAAAACATCAGATGTAAAAAGGAGAAAGACAGTCGAAGGACCGGACGAATCTCTATTCAACATCAGCACTCTTACCTATGAAGAACAGATAGCTGAAATACAAAAAAGACAGGAGAGCACAGCATACAAGACGGCGCCGTACAAATGCGTCATCTGCTTCAGAGGGTTCCTAGTTGCCGAGAGGTATAACGCGCACGCAGTCAGACATAGCGAGCAATGCGGCGCGTACGAGTGCTTCATATGCAAGACTCGCCTGAAGACCAGTCGCGCTCTAAGGAAGCATCTCACAGCGCAGCACACGGAGAAATTCAGTTGTAAAGGGTGCCCCTTCGTCACTAGAAACAGAGGTGTAGCGAGGGAGCATGAGAAATGGCACGCGGGCGCGCGCTACCAATGTCCTCACTGCCCCAGCGAGTTCGACAAACTAACAACCTACATGGGCCACATACGAATCAAGCACGTATCGGATTTCGTGTGCGAGTTGTGCGGATTCACGTTCGTCAGTAAAAAGGGCATTGAAGTACATAAAAAGAAGAAACACAGGCTCTCGGATAAAACGGTACCGCTAGAAGGTCCGTATTGCTGCGTGTGCGATGTCACATTTGTATCGGAGGAAGCGCACGCGCGTCATCTCAAACTGTCTTCTAAACACAGCAGCGACAATGATCCAAACCGCATAAGAAACGACTCGCAAAGCATCAACACTGAACGCAACGGTCGCGTCATGAGAAAAATAGAGCGGCGGCCCGTCATACACGCGCCCTCGCCTGCCCGGCCCGCCGGCGCCGGGCCCGTCACCTGCGAACAGTGCGGGGTCCAGCTTCGCGATTTGCGTCTCTACGCGCAGCACTTCCGACGCGCGCACCCCGACAAGAATCGAACCAAGTACCCCGCCATGAAGACGCCGTGCATGTGCGAGCAGTGCGGCAGGATATTCCAGAGCATGGCGCTCCTAAAGGACCATATGTGGGTGCACACAGGCGAGAAACGATTCAAATGCGACCGATGCGAGAAGAGTTTCACTCAGAAAACTAATTTGGTCTTCCATATGAGGGTGCACGGCGCTTCGAGACCTACTTACGAATGTCCATTGTGTGGGAAACACTTTGCTTTCTATAATAACAGAAGAAGGCATATGTTTATCCACACCGGCCTAAAGCCGTTCAAATGCGAGACGTGCGGCAAATGTTTCACGACCGCCGGCGAGCAGAGGGCCCACGTAGAACATGTGCATTTGAAGAAGCCGTGGCCTAAACGCGCGCGCGGACAACGCGGCCCGAGGGACCCCGCGCCGTGGCAGAAGGGGCCGCTGCATGAAGACTAG
Protein Sequence: MRCSVQNCSNDTRRKTKTNGLTFHVFPREPQLRHAWIEALGMSEWEPKDRSTVCSEHFRNSDFYETKCGLRRIKNGAVPVLGLVCRICLSMGVKMYDMFDYQLGEIYQQLTDTEWSDKDELPQKLCWECAARLASCAKMRSRALRSHKLMMDVLNSTSPITVKDVKSISRSTYELQSSLIQKVYEPNECDMYWQETCEPSLPVFLAEEKEENIKAESPVGCAASPLPELPPSVQVKDESTEIYFDEFNDNTDQFQDHFNESDDNVKLSEVAEKPKVKKKKVKIEKEKKPKERKKKDDEENPVETMDKYKTSDVKRRKTVEGPDESLFNISTLTYEEQIAEIQKRQESTAYKTAPYKCVICFRGFLVAERYNAHAVRHSEQCGAYECFICKTRLKTSRALRKHLTAQHTEKFSCKGCPFVTRNRGVAREHEKWHAGARYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGFTFVSKKGIEVHKKKKHRLSDKTVPLEGPYCCVCDVTFVSEEAHARHLKLSSKHSSDNDPNRIRNDSQSINTERNGRVMRKIERRPVIHAPSPARPAGAGPVTCEQCGVQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCDRCEKSFTQKTNLVFHMRVHGASRPTYECPLCGKHFAFYNNRRRHMFIHTGLKPFKCETCGKCFTTAGEQRAHVEHVHLKKPWPKRARGQRGPRDPAPWQKGPLHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00077049;
90% Identity: iTF_01125527; iTF_01124954; iTF_01124645;
80% Identity: iTF_01125527;