Basic Information

Insect: Ostrinia furnacalis
Gene Symbol: THAP3
Assembly: GCA_004193835.1
Location: NW:544965-578806[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 4.6 2.3e+02 2.3 0.2 1 20 367 386 367 389 0.74

2 11 0.0018 0.091 13.0 1.2 1 23 396 419 396 419 0.93

3 11 0.36 18 5.8 0.2 1 23 423 445 423 445 0.92

4 11 0.0039 0.19 12.0 1.0 1 23 450 473 450 473 0.98

5 11 0.0012 0.061 13.6 0.7 1 23 477 500 477 500 0.97

6 11 1.9 92 3.6 0.6 3 21 514 532 513 533 0.88

7 11 0.15 7.3 7.0 0.2 2 23 586 608 585 608 0.96

8 11 0.0089 0.44 10.9 0.5 2 20 624 642 623 645 0.92

9 11 1.8e-05 0.00089 19.4 2.5 1 23 651 673 651 673 0.99

10 11 0.00011 0.0056 16.8 2.7 1 23 680 702 680 702 0.98

11 11 0.0001 0.005 17.0 2.2 1 23 708 731 708 731 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	4.6	2.3e+02	2.3	0.2	1	20	367	386	367	389	0.74
2	11	0.0018	0.091	13.0	1.2	1	23	396	419	396	419	0.93
3	11	0.36	18	5.8	0.2	1	23	423	445	423	445	0.92
4	11	0.0039	0.19	12.0	1.0	1	23	450	473	450	473	0.98
5	11	0.0012	0.061	13.6	0.7	1	23	477	500	477	500	0.97
6	11	1.9	92	3.6	0.6	3	21	514	532	513	533	0.88
7	11	0.15	7.3	7.0	0.2	2	23	586	608	585	608	0.96
8	11	0.0089	0.44	10.9	0.5	2	20	624	642	623	645	0.92
9	11	1.8e-05	0.00089	19.4	2.5	1	23	651	673	651	673	0.99
10	11	0.00011	0.0056	16.8	2.7	1	23	680	702	680	702	0.98
11	11	0.0001	0.005	17.0	2.2	1	23	708	731	708	731	0.93

Sequence Information

Coding Sequence: atGCGGTGCAGCGTTCAAAATTGCTCCAATGACACGAGGCGGAAGACAAAAACTAATGGACTCACGTTCCATGTGTTCCCTCGCGAGCCACAGCTGCGTCATGCCTGGATCGAAGCCCTCGGCATGTCAGAGTGGGAGCCGAAAGACAGAAGCACTGTGTGCTCCGAACACTTTCGAAACAGCGACTTCTATGAGACCAAATGTGGGCTCCGGAGGATAAAGAACGGAGCTGTGCCAGTCCTGGGCCTTGGATCCGATGATTTGGATGCTCCTGCATCGTTACGAGTGTGCAGAATTTGTTTATCCATGGGTGTGAAAATGTATGACATGTTTGATTACCAACTGGGCGAGATCTACCAACAACTGACTGACACTGAATGGAGCGACAAAGACGAGCTGCCGCAGAAGCTATGCTGGGAGTGTGCAGCCAGACTGGCATCGTGTGCCAAGATGAGAAGCAGAGCTCTCAGGAGTCATAAGCTGATGATGGACGTGTTAAATTCCACATCCCCTATCACAGTGAAAGACGTGAAGTCAATAAGCCGGTCAACCTACGAACTGCAGTCTAGTCTCATACAAAAAGTGTATGAGCCTAACGAGTGCGACATGTATTGGCAAGAGACATGCGAGCCGAGTTTGCCTGTATTCTTGGCTGAAGAGAAGGAAGAAAATATTAAGGCGGAGTCCCCGGTTGGATGCGCCGCAAGCCCGCTGCCCGAGCTGCCTCCAAGCGTGCAAGTTAAAGACGAAAGCACAGAAATATACTTCGACGAGTTTAATGATAACACCGACCAGTTTCAAGatCATTTCAACGAATCGGATGACAACGTGAAACTTAGTGAAGTTGCCGAAAAGCCTaaagtgaagaagaaaaaagtcaaaatagaaaaagaaaagaaaccgAAAGAACGGAAGAAAAAAGACGACGAGGAAAACCCGGTGGAAACTATGGACAAATACAAAACATCAGACGTAAAAAGGAGAAAGACAGTCGATGGGCCGGACGAATCTCTATTCAACATCAGCACTCTCACTTATGAAGAACAGATAGCTGAAATACAAAAAAGACAGGAGAGCACAGCATACAAGACGGCGCCATACAAATGCGTCATCTGCTTCAGAGGATTCCTTGTCGCGGAGAGGTATAATGCGCACGCAGTCAGGCATAGCGAGCAATGCGGCGCGTACGAGTGTTTCATATGCAAGACTCGCCTGAAGACCAGTCGCGCTCTAAGGAAGCATCTCACAGCACAACACACAGAGAAGTTTAGTTGCAAAGGATGCCCCTTCGTCACTAGAAacagAGGTGTAGCGAGGGAGCATGAGAAATGGCACGCGGGCGCTCGCTACCAATGTCCACATTGTCCCAGCGAATTCGATAAACTAACAACCTACATGGGCCATATACGAATCAAGCACGTATCGGACTTTGTATGTGAGCTGTGTGGATTCACATTCGTTAGTAAAAAAGGCATTGAAGTACATAAAAAGAAGAAACACAGACTTTCGGATAAAACGGTGCCGCTAGAAGGTCCGTATTGCTGCGTGTGCGATGTCACATTTGTATCGGAGGATGCGCACGCCCGTCATCTCAAACTGTCTTCTAAACACAGCAGCGACAATGACCCAAACCGAATAAGAAACGACTCGCAAAGCATCAACACGGAACGCAATGGGCGCGTCATGAGAAAAATAGAGCGGCGGCCCGTCATACACGCGCCCTCGCCTGCCCAGCCCGCCGGCGCCGGGCCCGTCACGTGCGAACAGTGCGGGGTCCAGCTCCGCGATTTGCGTCTCTACGCGCAGCACTTCCGCCGCGCGCACCCCGACAAGAATCGAACCAAGTACCCCGCCATGAAGACGCCGTGCATGTGCGAACAGTGCGGCAGGATATTCCAGAGCATGGCGCTCCTAAAGGACCATATGTGGGTTCACACGGGCGAGAAACGATTCAAATGCGACCGATGCGAGAAGAGTTTTACTCAGAAAACTAATTTGGTCTTCCATATGAGGGTGCATGGCGCTTCGAGACCTACGTACGAATGTCCGCTGTGTGGGAAACACTTTGCTTTCTATAATAATAGAAGACGACACATGTTTATCCACACCGGCCTCAAGCCTTTCAAGTGCGAGACGTGCGGCAAATGTTTCACGACCGCGGGTGAGCAGAGAGCCCACGTAGAACATGTGCATTTGAAGAAGCCGTGGCCTAAACGCGCGCGCGGACAACGCGGCCCGAGGGACCCCGCGCCGTGGCAGAAGGGGCCGCTGCATGAAGACTAG
Protein Sequence: MRCSVQNCSNDTRRKTKTNGLTFHVFPREPQLRHAWIEALGMSEWEPKDRSTVCSEHFRNSDFYETKCGLRRIKNGAVPVLGLGSDDLDAPASLRVCRICLSMGVKMYDMFDYQLGEIYQQLTDTEWSDKDELPQKLCWECAARLASCAKMRSRALRSHKLMMDVLNSTSPITVKDVKSISRSTYELQSSLIQKVYEPNECDMYWQETCEPSLPVFLAEEKEENIKAESPVGCAASPLPELPPSVQVKDESTEIYFDEFNDNTDQFQDHFNESDDNVKLSEVAEKPKVKKKKVKIEKEKKPKERKKKDDEENPVETMDKYKTSDVKRRKTVDGPDESLFNISTLTYEEQIAEIQKRQESTAYKTAPYKCVICFRGFLVAERYNAHAVRHSEQCGAYECFICKTRLKTSRALRKHLTAQHTEKFSCKGCPFVTRNRGVAREHEKWHAGARYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGFTFVSKKGIEVHKKKKHRLSDKTVPLEGPYCCVCDVTFVSEDAHARHLKLSSKHSSDNDPNRIRNDSQSINTERNGRVMRKIERRPVIHAPSPAQPAGAGPVTCEQCGVQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCDRCEKSFTQKTNLVFHMRVHGASRPTYECPLCGKHFAFYNNRRRHMFIHTGLKPFKCETCGKCFTTAGEQRAHVEHVHLKKPWPKRARGQRGPRDPAPWQKGPLHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00077049;
90% Identity: iTF_01125852;
80% Identity: iTF_01124645;