Basic Information

Insect: Ostrinia nubilalis
Gene Symbol: -
Assembly: GCA_963855985.1
Location: OY979746.1:14667781-14679959[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 7.7 6.9e+02 2.0 0.2 2 23 6 27 5 27 0.94

2 14 0.0069 0.62 11.6 0.2 1 23 1184 1207 1184 1207 0.92

3 14 1e-05 0.00092 20.5 3.1 2 23 1354 1375 1353 1375 0.96

4 14 0.00015 0.013 16.8 1.8 1 23 1381 1403 1381 1403 0.98

5 14 0.0062 0.56 11.7 2.5 2 23 1410 1431 1409 1432 0.95

6 14 0.63 57 5.4 3.8 5 23 1445 1463 1443 1463 0.97

7 14 0.0088 0.79 11.2 1.2 3 23 1470 1491 1469 1491 0.96

8 14 0.0088 0.79 11.2 1.2 3 23 1552 1573 1551 1573 0.96

9 14 0.0076 0.68 11.4 0.1 2 23 1589 1609 1588 1609 0.97

10 14 0.00055 0.049 15.0 2.0 3 20 1617 1634 1615 1637 0.89

11 14 0.0011 0.1 14.0 0.2 1 23 1645 1667 1645 1667 0.98

12 14 0.0079 0.71 11.4 7.2 1 23 1673 1695 1673 1695 0.98

13 14 9.2e-06 0.00083 20.6 1.3 1 23 1701 1725 1701 1725 0.98

14 14 0.00097 0.087 14.2 4.6 1 23 1731 1753 1731 1754 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	7.7	6.9e+02	2.0	0.2	2	23	6	27	5	27	0.94
2	14	0.0069	0.62	11.6	0.2	1	23	1184	1207	1184	1207	0.92
3	14	1e-05	0.00092	20.5	3.1	2	23	1354	1375	1353	1375	0.96
4	14	0.00015	0.013	16.8	1.8	1	23	1381	1403	1381	1403	0.98
5	14	0.0062	0.56	11.7	2.5	2	23	1410	1431	1409	1432	0.95
6	14	0.63	57	5.4	3.8	5	23	1445	1463	1443	1463	0.97
7	14	0.0088	0.79	11.2	1.2	3	23	1470	1491	1469	1491	0.96
8	14	0.0088	0.79	11.2	1.2	3	23	1552	1573	1551	1573	0.96
9	14	0.0076	0.68	11.4	0.1	2	23	1589	1609	1588	1609	0.97
10	14	0.00055	0.049	15.0	2.0	3	20	1617	1634	1615	1637	0.89
11	14	0.0011	0.1	14.0	0.2	1	23	1645	1667	1645	1667	0.98
12	14	0.0079	0.71	11.4	7.2	1	23	1673	1695	1673	1695	0.98
13	14	9.2e-06	0.00083	20.6	1.3	1	23	1701	1725	1701	1725	0.98
14	14	0.00097	0.087	14.2	4.6	1	23	1731	1753	1731	1754	0.95

Sequence Information

Coding Sequence: ATGGATCAAATGGTGCAGTGCCCTGTGTGCACGCTCTACCTGCACAATGGGATCACACTAGAATCTCACCTTGATACCCATCCCAAAGACCAGGTAATAAAAGCATTGTGCAACCTAACCACGAAGGCCAGTAGTAGCTATGCGAGCAGAACATCCACACCGATGCACTGTGACCGCTCGTACAGAAGCAGGTCTCGgactccagcagtggacgacagaTGGTCCCACAGAAGTAGTGAAACGGATAGATACTGGCGAAGAACACCGAGCAGAACTTCCAAATCAAGTCAGGCATTAAATGCTTCTCGCAATGGAACACCAGACATTAGAATGAGTGATATGAGCTTTGACAACAATAGTGCTAATCAATTTTCTGCTCCATCTTATCCTCTGAAAGCAGACAAAACTCAACAGTATCCGAATACACCGACTGGCGAATTGGAACCGCCCTATGCATATTACCAGGACACCAATGATGATAGAGAAATAAAGTATTCCCGCAGCCCAGAATACAATCCTTTGGATACCAGTACCCCAGTTTTCGCTCATAACACTCCAACAACTACCAATGTCAAAATACAGGCTACATTGCTTCCAACAGTTACTCGAAGAAGTAATGAGAATATAGTAAAAATGTTACCAAAACCAAATAATATACTTGTAAAGACTAATATGGGTGGATTACAGTATATCACTCCAGGGTTGAAGCCGATGCATTTGATGGTGCCCACTCCTCCAACATTTGTCCAAAAAAATGTACAAAGCAACATGATTATGGCCAGTGGTTTACCTGTAAGCACAATGGTGGAGTCAAAGACATTGGCCCCAACAATACCCACAAACCATTTCAATCAAATGACCAGCAGTACCTTCACACCAGGTACAACAGTAGTACAAAATTCTCAGATTATTTATAGAGAAATGGTTCAGAATATGGATGGTAAGCGTTTCGTTTCATGTGTGCCTTCAGTGCTCGGTCATGAGAATGTTCGTAATGTTGCACCGGGGACATCTATGTATCAGAATTTAATGTTAGTGGATCAACTTGGAAATGCACCATGCATGTACACAGCACCGCAGCCCATTATACCAAAGCCCTGTACCACAACTGTCTATCCTAATAATGGTACGGAGGCACCTAGCGGTACCAATTCAAATGAACATAAAGCTGGTCCTTCTTCAGATGATCGCAATAAAACTCTTGTTAATGAAGTAACTGCCCTTGTTGATCCATTGGCCCTTCCTGCTGGAACCAACACGAGTTCGACCACCACCCAAACTGAAGTAGATATATCTATCCCTAAAAAAACGGATGTTCAGTCTGTTGAAAAATGTGACACGCCAGGGTCTAGTAAAGGCTTGAAAATCCTCAGTAACATTAAAGTGGAAGTTCCAGTTCAACACAACAAGAATATGCTGAACACTGTGATGGATCTGACTGGAACCACAGACCCTGAGGATCCTGAGAGGTCAGAGACACCTGAGAAAATTCTACCTGATTTAGATGATCACAATCATATGTCTGATGATTGCACCCAACCATCAATATCTAGCAGTGACAGTGCAGTCTCACATGCCTTTTCTGTGATAAAAAATGTTGGTAACCCACCATCTTATAAAGAATCTTCCATCAAATCAAGTATAGATAGTAAAATCGATGCAGAATTTTCTGACAGCTGCCCAGTCCCAGATTTAATATGTAATGAGAAACCATCTATATCACCTTGCAGCGAATTATCAGAGGTTGGAGATAACTCTGCTGATCGTGCTTCAGTATGTAACTCGGAATCGCCTAAACCTCAAATAAACCAATCAATTAGTTTAGATAGTAATACTGATAAGAAGCCCCAATCGGCAATAAAACCATACAGACACAATGCACTACgattaaataatatatttgtgaaaaagcacaaaaaaatattacaaataaaaaatgcaaaGCAGTCCAGTAGTCAGTTGGATCACACAGAAGTAGAGCCACAAGCGTCGTCATCCTTTTGTAACTCGCCTGAAAATTTTCCTAGAGGCTCACCGGCTTCATTTAAGTCGGTCGAAAAATTCTCTCAAGCATCACCTGCTTCATTTAAGTCGGTCGAAAAGTTCTCCCCAGCGTCACCAGCTTCATGTAAATCGGTCGAAAAATTCTCTCGAGCGTCACCGGCTTCATTCAAGTCGGTCGAAAAGTTCTCTCCAGCGTCACCGGCTTCGTGTAAGTCGGTCGATAAATTCTCACGGGCCTCGCCGGCTTCATTTAAGTCGGTCGAAAAATTCTCTCAAGCCTCACCGGCTTCGTGTAAGTCGGTCGAAAAATTATCTCGAGCGTCACCGGCTTCATTTAAGTCGGTCGAAAAATTCTCTCAAGCCTCACCGGCTTCGTGTAAGTCGGTCGAAAAATTCTCTCCAGCGTCATCCTTGTGCAAGTCGCCGGATAATTTTTCTCGAGCGTCATCATCTTCGTGCAAGTCGCCGGAAATTTTTACCCGCGCTTCGTCATCATGTAAATCACCTGGAAATTTTTCTCGAGCGTCATCGTCCTCGTGCCGAACACCCGAAAATTTTTCAATAACTAAAATGATTTGCTCCGAAAAGTCTGAATGTTTAGACGAAAAGAGCCCTTTAGAATCGATGCCAGAAGAGAAGATGATCGAGAAAGACGAAGAAGACCAAGATCATAACGATTTCGACGCCGACACGGAGGAGCAATCGATGGACATCGAGCCCGTCGCGTCCTCCAGCCTGAACACTTCGGAGCAGTTCACGACCAGCATAGACGTGGTGCAGGTCAAAGAGGAGGTGAACACGAGCAACGAGGATCCTTTCAGCAACGAGAACAGTAATTCCAATCGCGAGATGGAACCTTTGGACGGTCTGCGGCCGATCAACGTGATATCGTACGGCAACATGCCGCCGGGGGAGTTCGACGAGGAGTCGAACCATCGCGAGCTTCTCGAGCTGGAGGCTGCGTCGAAAAACAAGCAGTTCGTCAGCATGATGAACGAGAACTACTTCGGGGACAACATCTACGCGGACTACTTCACGCCGGACCGCGTGGAGGCGTTCGACGCGGCCCGGGAGGCGCCGTCGTTCGCGAAAGAGAATCCGAAGGATATGTACCTGTGGGGCGAGTCGTCGCACCACAAGGAGAGCGAGTTCGTGCTGCCGAACTTTATACACGAGAGTTATAAGATAGCGGAGAGTAGCGCGGTGGATTACGCTGAAATGGGGAGCAGAGCGGTGCGGGTAGATGTGGAGGTGGACGTGTGCGAGCGGGACAGCAAGGCGGACGTGCTGGGCGAGGCCGCGGGCGAGGCGCCGCTGAACATCTGCGCCGACGAGCGGATGCCGCCGCGCGGCGAGCTCAGCGGCCAGGAGAGCAACGGGGACACGGAGTCGCCGTGGAACGGAATGTACACCGACGTACCGCCTTCGGAGCCCTACGATTTGATCGCGCGCGAGAGTTGGGTGTCGGACGGCTCCGAGATAGATACCAATGAGAAGCGGGAAAATTTGGAGGAAGAGATCCATTTCGCGCAAAAAGGGCGTATTTTCACGTGCTCGATATGCGGCTCTAAGTTTCCCTCGTTGTACGAGATGCGTGCGCACAAATCGGCGGCGCATGCGCCTTTGACGGTTCACGCGCCGCTCGTCGCGCCCGCCCTAGCGTCCCAGCTGTCCCCCCACCTTTCGGCCCAGCTGCCCCCCCACCTTTCGCCCCACCCTCCGCAGTTCGTTCTGCCCCCCCACTCGCTGCAGCCCCCCGAAACGGCGCGCACGTCATACAGCAGGATGCTGACCGCGAGGATTATCAAGAAAGAGGAAAAACCGGATGAAGCCACTGGAGTTCCTGGCACTGCCGGAATGCCGCTAGACTCGAAAGAGGTGCTCGCGAGCAGTATGCTTCAGTACGACGCTCTAGGAGAGGCCAAGCCCAAGCTCGAGGCGCTCATCAAGCAGGAGGCCAAGGCGCGCCGCAAGAGGGACTTCGTCTGCCCCACGTGCAAGGAGGACCAGCTAACCGAGGTGGCGTTCCAGGCGCACCTTAAGATCCACCCGCTAGAGTGCCTGACGTGCGGCAAGTGCTTCTTCCGCCGCTCCAACCTTCAGCTGCACATCAAGATGCATCTGGGCATCAGGAACCATAAGTGCGAGGTATGCGAAAAGCGGTTCATCACTCGACAGAAACTGATTGAGCATCAGAACGTGCACACCGGCCGCACACCAGTCAAGTGCACCATCTGCGACGACACCTTCCGCCGCTACTCCAACATGGTGCAGCACCGGGACCGCCACCACTTCCAAAAGAAGGCCAAAGTGCGCGACTTTGTTTGCCACTGCGGAGCCGTGTTCCACTCGCGCGCCAAGCTGCACTGGCACCAGGAGACGCACGACGGCAAGCCCAAGGCCTGCCTCTACTGCTCCGACAAGTTCGTGCACGCGGCTTCGCTCACGCGACACATACGACGCACGCACAACATCTTCTTCCTGTCCGACCGGAGCAAGGCGAAGGAGAACGTGCCGTGCCCTGTTTGCAAGCAGATGTCGGCCAATTTCGGCGAAGATGTCGGCCAATGTCGGCGAAAATGTCGGCCAAGCCCACTCAGAGCCAAGCTGCACTGGCACCAGGAGACGCACGACGGCAAGCCCAAGGCCTGCCTCTACTGCTCCGACAAGTTTGTGCACGCGGCTTCGCTCACGCGACACATACGACGCACGCACAACATATTCTTCCTGTCCGACCGGAGCAAGGCGAAAGAGAACGTGCCGTGTCCTGTTTGCAAGCAGATGTACCTCCGGTCTAACCTGCGCGCCCATTTACTAACTCACAGCGGCAAGCGACCACATCTATGCGTGATCTGCAACAAGTCCTTCAGCACGAAGTGGAACCTAAAGCTGCACAGGTGGACACACATGTCAAGATCTGCTAAACCATTTAAGTGTAACCTGTGCAAGGGAGCTTTCATCAGACAGGCGGAGTACATATCCCACATGAACGCGCACAAGTCGTTCCGGCCCTACACGTGCAACTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGCGACACGTCAGAGAACACGAGACCGCCAAAAAGTACGTGTGCAAAGTCCCCGAGTGCGGTAAGTCGTTCCACCGGAGCTACTACCTCTCCGAACATATGAAGGTCCACAGCGGAGCCAGACCCTTCGCCTGCAACATCTGCGGAAAAACCTCCAGCAACAAATCCAACCACAACAAACACCTTAAAATCCACCACGCGCGGGAACCCGTCGCCACCGAGGCGTAG
Protein Sequence: MDQMVQCPVCTLYLHNGITLESHLDTHPKDQVIKALCNLTTKASSSYASRTSTPMHCDRSYRSRSRTPAVDDRWSHRSSETDRYWRRTPSRTSKSSQALNASRNGTPDIRMSDMSFDNNSANQFSAPSYPLKADKTQQYPNTPTGELEPPYAYYQDTNDDREIKYSRSPEYNPLDTSTPVFAHNTPTTTNVKIQATLLPTVTRRSNENIVKMLPKPNNILVKTNMGGLQYITPGLKPMHLMVPTPPTFVQKNVQSNMIMASGLPVSTMVESKTLAPTIPTNHFNQMTSSTFTPGTTVVQNSQIIYREMVQNMDGKRFVSCVPSVLGHENVRNVAPGTSMYQNLMLVDQLGNAPCMYTAPQPIIPKPCTTTVYPNNGTEAPSGTNSNEHKAGPSSDDRNKTLVNEVTALVDPLALPAGTNTSSTTTQTEVDISIPKKTDVQSVEKCDTPGSSKGLKILSNIKVEVPVQHNKNMLNTVMDLTGTTDPEDPERSETPEKILPDLDDHNHMSDDCTQPSISSSDSAVSHAFSVIKNVGNPPSYKESSIKSSIDSKIDAEFSDSCPVPDLICNEKPSISPCSELSEVGDNSADRASVCNSESPKPQINQSISLDSNTDKKPQSAIKPYRHNALRLNNIFVKKHKKILQIKNAKQSSSQLDHTEVEPQASSSFCNSPENFPRGSPASFKSVEKFSQASPASFKSVEKFSPASPASCKSVEKFSRASPASFKSVEKFSPASPASCKSVDKFSRASPASFKSVEKFSQASPASCKSVEKLSRASPASFKSVEKFSQASPASCKSVEKFSPASSLCKSPDNFSRASSSSCKSPEIFTRASSSCKSPGNFSRASSSSCRTPENFSITKMICSEKSECLDEKSPLESMPEEKMIEKDEEDQDHNDFDADTEEQSMDIEPVASSSLNTSEQFTTSIDVVQVKEEVNTSNEDPFSNENSNSNREMEPLDGLRPINVISYGNMPPGEFDEESNHRELLELEAASKNKQFVSMMNENYFGDNIYADYFTPDRVEAFDAAREAPSFAKENPKDMYLWGESSHHKESEFVLPNFIHESYKIAESSAVDYAEMGSRAVRVDVEVDVCERDSKADVLGEAAGEAPLNICADERMPPRGELSGQESNGDTESPWNGMYTDVPPSEPYDLIARESWVSDGSEIDTNEKRENLEEEIHFAQKGRIFTCSICGSKFPSLYEMRAHKSAAHAPLTVHAPLVAPALASQLSPHLSAQLPPHLSPHPPQFVLPPHSLQPPETARTSYSRMLTARIIKKEEKPDEATGVPGTAGMPLDSKEVLASSMLQYDALGEAKPKLEALIKQEAKARRKRDFVCPTCKEDQLTEVAFQAHLKIHPLECLTCGKCFFRRSNLQLHIKMHLGIRNHKCEVCEKRFITRQKLIEHQNVHTGRTPVKCTICDDTFRRYSNMVQHRDRHHFQKKAKVRDFVCHCGAVFHSRAKLHWHQETHDGKPKACLYCSDKFVHAASLTRHIRRTHNIFFLSDRSKAKENVPCPVCKQMSANFGEDVGQCRRKCRPSPLRAKLHWHQETHDGKPKACLYCSDKFVHAASLTRHIRRTHNIFFLSDRSKAKENVPCPVCKQMYLRSNLRAHLLTHSGKRPHLCVICNKSFSTKWNLKLHRWTHMSRSAKPFKCNLCKGAFIRQAEYISHMNAHKSFRPYTCNYCGCQFIRKYNCQRHVREHETAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFACNICGKTSSNKSNHNKHLKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01124852;
90% Identity: iTF_01124852;
80% Identity: -