Basic Information

Insect: Ostrinia furnacalis
Gene Symbol: -
Assembly: GCA_004193835.1
Location: NW:204892-226390[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 5.6 2.8e+02 2.1 0.2 2 23 6 27 5 27 0.94

2 13 0.005 0.25 11.7 0.2 1 23 1185 1208 1185 1208 0.92

3 13 7.4e-06 0.00037 20.6 3.1 2 23 1343 1364 1342 1364 0.96

4 13 0.00011 0.0053 16.9 1.8 1 23 1370 1392 1370 1392 0.98

5 13 0.0045 0.22 11.8 2.5 2 23 1399 1420 1398 1421 0.95

6 13 0.46 23 5.5 3.8 5 23 1434 1452 1432 1452 0.97

7 13 0.0064 0.32 11.3 1.2 3 23 1459 1480 1458 1480 0.96

8 13 0.0055 0.27 11.5 0.1 2 23 1496 1516 1495 1516 0.97

9 13 0.0004 0.02 15.1 2.0 3 20 1524 1541 1522 1544 0.89

10 13 0.00083 0.041 14.1 0.2 1 23 1552 1574 1552 1574 0.98

11 13 0.0058 0.28 11.5 7.2 1 23 1580 1602 1580 1602 0.98

12 13 6.7e-06 0.00033 20.7 1.3 1 23 1608 1632 1608 1632 0.98

13 13 0.00071 0.035 14.3 4.6 1 23 1638 1660 1638 1661 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	5.6	2.8e+02	2.1	0.2	2	23	6	27	5	27	0.94
2	13	0.005	0.25	11.7	0.2	1	23	1185	1208	1185	1208	0.92
3	13	7.4e-06	0.00037	20.6	3.1	2	23	1343	1364	1342	1364	0.96
4	13	0.00011	0.0053	16.9	1.8	1	23	1370	1392	1370	1392	0.98
5	13	0.0045	0.22	11.8	2.5	2	23	1399	1420	1398	1421	0.95
6	13	0.46	23	5.5	3.8	5	23	1434	1452	1432	1452	0.97
7	13	0.0064	0.32	11.3	1.2	3	23	1459	1480	1458	1480	0.96
8	13	0.0055	0.27	11.5	0.1	2	23	1496	1516	1495	1516	0.97
9	13	0.0004	0.02	15.1	2.0	3	20	1524	1541	1522	1544	0.89
10	13	0.00083	0.041	14.1	0.2	1	23	1552	1574	1552	1574	0.98
11	13	0.0058	0.28	11.5	7.2	1	23	1580	1602	1580	1602	0.98
12	13	6.7e-06	0.00033	20.7	1.3	1	23	1608	1632	1608	1632	0.98
13	13	0.00071	0.035	14.3	4.6	1	23	1638	1660	1638	1661	0.95

Sequence Information

Coding Sequence: ATGGATCAAATGGTGCAGTGCCCTGTGTGCACGCTCTACCTGCACAATGGGATCACACTAGAATCTCACCTTGATACCCATCCCAAAGACCAGGTAATAAAAGCATTGTGCAACCTAACCACGAAGGCCAGTAGTAGCTATGCAAGCAGAACATCCACACCGATGCACTGTGACCGCTCGTACAGAAGCAGGTCTCGgactccagcagtggacgacagaTGGTCCCACAGAAGTAGTGAAACGGATAGATACTGGCGAAGAACACCGAGCAGAACTTCCAAATCAAGTCAGGCATTAAATGCTTCCCGCAATGGAACACCAGACATTAGAATGAGTGATATGAGCTTTGAAAACAATAGTGCTAATCAATTTTCTGCTCCATCTTATCCTCTGAAAGCAGACAAAACTCAACAGTATCCGAATACACCGACTGGCGAATTGGAACCGCCCTATGCATATTACCAGGACACCAATGATGATAGAGAAATAAAGTATTCCCGCAGCCCAGAATACAATCCTTTGGATACCAGTACCCCAGTTTTCGCTCATAACACTCCAACAACTACCAATGTCAAAATACAGGCTACTTTGCTTCCAACAGTTACTCGGAGAAGCAATGAGAATATAGTAAAAATGTTACCAAAACCAAATAATATACTTGTAAAGACTAATATGGGTGGATTACAGTATATCACTCCAGGGTTGAAGCCGATGCATTTGATGGTGCCCACTCCTCCAACGTTTGTCCAAAAAAATGTACAAAGCAACATGATTATGGCCAGTGGTTTACCTGTAAGCACAATGGTGGAGTCAAAGACATTGGCCCCAACAATACCCACAAACCATTTCAATCAAATGACCAGCAGTACCTTCACACCAGGTACAACAGTAGTACAAAATTCTCAGATTATTTATAGAGAAATGGTTCAGAATATGGATGGTAAGCGTTTCGTTTCATGTGTGCCTTCAGTGCTCGGTCATGAGAATGTTCCTAATGTTGCACCGGGGACATCTATGTATCAGAATTTAATGTTAGTGGATCAACTTGGAAATGCACCATGCATGTACACAGCACCGCAGCCCATTATACCAAAGCCCTGTACCACAACTGTCTATCCTAATAATGGTATGGAGGCACCTAGCGGTACCAATTCAAATGAACATAAAGCTGGTCCTTCTTCAGATGATCGCAATAAAACTCTTGTTAATGAAGTAACTGCCATTGTTGATCCATTGGCCCTTCCTGCTGGAACCAACACGAGTTCGACCACCACCCAAACTGAAGTAGATATATCTATCCCTAAAAAAACTGATGTTCAGTCTGTTGAAAAATGTGACACGCCAGGGTCTAGTAAAGGCTTGAAAATCCTCAGTAACATTAAAGTGGAAGTTCCAGTTCAACACAACAAGAATATGCTGAACACTGTGATGGATCTGACTGGAACCACAGACCCTGAGGATCCTGAGAGGTCAGAGACACCTGAGAAAATTCTACCTGATTTAGATGATCACAATCATATGTCTGATGATTGCACCCAACCATCAATATCTAGCAGTGACAGTGCAGTCTCACATGCCTTTTCTGTGATAAAAAATGTTGGTAACCCACCATCTTATAAAGAATCTTCCATCAAATCAAGTATAGATAGTAAAATCGATGCAGAATTTTCTGACAGCTGCCCAGTCCCAGATTTAATATGTAATGAGAAACCATCTATATCACCTTGCAGCGAATTATCAGAGGTTGGAGATAACTCTGCTGATCGTGCTTCAGTATGTAACTCGGAATCGCCTAAACCTCAAATAAACCAATCAATTAGTTTAGATAGTAATACTGATAAGAAGCCCCAATCGGCAATAAAACCATACAGACACAATGCACTAcgattaaataatatatttgtgaaaaagcacaaaaaaatattacaaataaaaaatgcaaagcAGTCCAGTAGTCAGTTGGATCACACAGAAGTAGAGCCACAAGCGTCGTCATCCTTTTGTAACtcgcctgaaaattttcctAGAGGCTCACCGGCTTCATTTAAGTCGGTCGAAAAATTCTCTCAAGCATCACCTGCTTCATTTAAGTCGGTCGAAAAGTTCTCCCCAGCGTCACCGGTTTCATGTAAATCGGTCGAAAAATTCTCTCGAGCGTCACCGGCATCATTCAAGTCGGTCGAAAAGTTCTCTCCAGCGTCACCGGCTTCGTGTAAGTCGGTCGATAAATTCTCTCGGGCGTCGCCGGCTTCATTTAAGTCGGTCGAAAAATTCTCTCAAGCATCACCGGCTTCATGTAAGTCGGTCGAAAAATTATCTCGAGCGTCACCGGCTTCATTTAAGTCGGTCGAAAAATTCTCTCAAGCCTCACCGGCTTCTTGTAAGTCGGTCGAAAAATTCTCTCCAGCGTCATCCTTGTGCAAGTCGCCGGATAACTTTTCTCGAGCGTCATCATCTTCGTGCAAGTCGCCGGAAATTTTCACCCGCGCGTCGTCATCTTGTAAATCACCTGGAAATTTTTCTCGAGCGTCATCGTCCTCGTGCCGAACACCCGAAAATTTTTCAATAACTAAAATGATTTGCTCCGAAAAGTCTGAATGTTTAGACGAAAAGAGTCCTTTAGAATCGATGCCAGAAGAGAAGATGATCGAGAAAGACGAAGAAGACCAAGATCATAACGATTTCGACGCCGACACGGAGGAGCAGTCGATGGACATCGAGCCCGTCGCGTCCTCCAGCCTGAACACTTCGGACCAGTTCACGACCAGCATAGACGTGGTGCAGGTCAAAGAGGAGGTGAACACGAGCAACGAGGATCCTTTCAGCAACGAGAACAGTAATTCCAATCGCGAGATGGAACCTTTGGACGGTCTGCGGCCGATCAACGTGATATCGTACGGCAACATGCCGCCGGGGGAGTTCGACGAGGAGTCGAACCATCGCGAGCTTCTCGAGCTGGAGGCTGCGTCGAAAAACAAGCAGTTCGTCAGCATGATGAACGAGAACTACTTCGGGGACAACATCTACGCGGACTACTTTACTCCGGACCGCGTGGAGGCGTTCGACGCGGCCCGGGAGGCGCCGTCGTTCGCGAAAGAGAATCCGAAGGATATGTACCTGTGGGGCGAGTCGTCGCACCACAAGGAGAGCGAGTTCGTGCTGCCGAACTTTATACACGAGAGTTATAAGATAGCGGAGAGCAGCGCGGTGGATTATGCCGAGATGGGGAGTAGAGCGGTGCGGGTAGACGTGGAAGTGGACGTGTGCGAGCGGGACAGCAAGGCGGACGTGCTGGGCGAGGCCGGGCCGGGCGAGGCGCCGCTGAACATTTGCGCCGACGAGCGGATGCCGCCGCGCGGCGAGCTCAGCGGCCAGGAGAGCAACGGGGACACGGAGTCGCCGTGGAACGGAATGTACACGGACGTACCGCCTTCGGAGCCCTACGATTTGATCGCGCGCGAGAGTTGGGTGTCGGACGGCTCCGAGATAGATACCAATGAGAAGCGGGAAAATTTGGAGGAAGAGATCCATTTCGCGCAAAAAGGGCGTATTTTCACGTGCTCGATATGCGGCTCTAAGTTTCCCTCGTTGTACGAGATGCGTGCGCATAAGTCAGCGGCGCATGCGCCTTTGACTGTTCACGCGCCGCTCGTGGCGCCCGCCCTAGCGTCCCAGCTGTCCCCCCACCCTCCGCAGTTCGTTCTGCCCCCCCACTCGCTGCAGCCACCCGAAACGGCGCGCACGTCATACAGCAGGATGCTGACCGCGAGGATTATCAAGAAAGAGGAAAAACCGGACGACGCCACTGGAGTTCCTGGCACTGCCGGAATGCCGCTAGACTCGAAAGAGGTGCTCGCGAGCAGTATGCTTCAGTACGACGCTCTAGGAGAGGCCAAGCCCAAGCTCGAGGCGCTCATCAAGCAGGAGGCCAAGGCGCGCCGCAAGAGAGACTTCGTCTGCCCCACGTGCAAGGAGGACCAGCTGACCGAGGTGGCGTTCGCAGCGCACCTCAAGATCCACCCGCTAGAGTGCCTGACGTGCGGCAAGTGCTTCTTCCGCCGCTCCAACCTTCAGCTGCACATCAAGATGCATCTGGGCATCAGGAACCACAAGTGCGAGGTATGCGAAAAGCGGTTCATCACTCGACAGAAACTGATTGAGCATCAGAACGTGCACACCGGCCGCACGCCCGTCAAGTGCACCATCTGCGACGACACCTTCCGCCGCTACTCCAACATGGTGCAGCACCGGGACCGCCACCACTTCCAAAAGAAGGCCAAAGTGCGTGACTTTGTGTGCCACTGCGGAGCCGTGTTCCATTCGCGGGCCAAGCTGCACTGGCACCAGGAGACACACGACGGCAAGCCCAAGGCCTGCCTCTACTGCTCCGACAAGTTCGTGCACGCGGCTTCGCTCACGCGCCACATACGACGCACGCACAACATCTTCTTCCTGTCCGACCGGAGCAAGGCTAAGGAGAACGTGCCGTGTCCCGTTTGCAAGCAGATGTACCTTAGATCGAACCTGCGCGCCCATTTACTGACACACAGCGGCAAACGACCACATCTATGCGTCATTTGCAACAAGTCCTTCAGCACCAAGTGGAACCTAAAGCTGCACAGGTGGACACACATGTCAAGATCTGCTAAACCATTTAAGTGTAACCTGTGCAAGGGAGCTTTCATCAGACAGGCGGAGTACATATCCCACATGAACGCGCACAAGTCGTTCCGGCCCTACACGTGCAACTACTGCGGCTGCCAGTTTATCCGCAAGTACAACTGCCAGCGACACGTCAGAGAACACGAGACCGCCAAAAAGTACGTGTGCAAAGTCCCCGAGTGTGGTAAGTCGTTCCACCGGAGCTACTACCTCTCCGAACATATGAAGGTCCACAGCGGAGCCAGACCCTTCGCCTGCAACATCTGCGGAAAAACCTCCAGCAACAAATCCAACCACAACAAACACCTTAAAATCCACCACGCGCGGGAACCCGTCGCCACCGAGGCGTAG
Protein Sequence: MDQMVQCPVCTLYLHNGITLESHLDTHPKDQVIKALCNLTTKASSSYASRTSTPMHCDRSYRSRSRTPAVDDRWSHRSSETDRYWRRTPSRTSKSSQALNASRNGTPDIRMSDMSFENNSANQFSAPSYPLKADKTQQYPNTPTGELEPPYAYYQDTNDDREIKYSRSPEYNPLDTSTPVFAHNTPTTTNVKIQATLLPTVTRRSNENIVKMLPKPNNILVKTNMGGLQYITPGLKPMHLMVPTPPTFVQKNVQSNMIMASGLPVSTMVESKTLAPTIPTNHFNQMTSSTFTPGTTVVQNSQIIYREMVQNMDGKRFVSCVPSVLGHENVPNVAPGTSMYQNLMLVDQLGNAPCMYTAPQPIIPKPCTTTVYPNNGMEAPSGTNSNEHKAGPSSDDRNKTLVNEVTAIVDPLALPAGTNTSSTTTQTEVDISIPKKTDVQSVEKCDTPGSSKGLKILSNIKVEVPVQHNKNMLNTVMDLTGTTDPEDPERSETPEKILPDLDDHNHMSDDCTQPSISSSDSAVSHAFSVIKNVGNPPSYKESSIKSSIDSKIDAEFSDSCPVPDLICNEKPSISPCSELSEVGDNSADRASVCNSESPKPQINQSISLDSNTDKKPQSAIKPYRHNALRLNNIFVKKHKKILQIKNAKQSSSQLDHTEVEPQASSSFCNSPENFPRGSPASFKSVEKFSQASPASFKSVEKFSPASPVSCKSVEKFSRASPASFKSVEKFSPASPASCKSVDKFSRASPASFKSVEKFSQASPASCKSVEKLSRASPASFKSVEKFSQASPASCKSVEKFSPASSLCKSPDNFSRASSSSCKSPEIFTRASSSCKSPGNFSRASSSSCRTPENFSITKMICSEKSECLDEKSPLESMPEEKMIEKDEEDQDHNDFDADTEEQSMDIEPVASSSLNTSDQFTTSIDVVQVKEEVNTSNEDPFSNENSNSNREMEPLDGLRPINVISYGNMPPGEFDEESNHRELLELEAASKNKQFVSMMNENYFGDNIYADYFTPDRVEAFDAAREAPSFAKENPKDMYLWGESSHHKESEFVLPNFIHESYKIAESSAVDYAEMGSRAVRVDVEVDVCERDSKADVLGEAGPGEAPLNICADERMPPRGELSGQESNGDTESPWNGMYTDVPPSEPYDLIARESWVSDGSEIDTNEKRENLEEEIHFAQKGRIFTCSICGSKFPSLYEMRAHKSAAHAPLTVHAPLVAPALASQLSPHPPQFVLPPHSLQPPETARTSYSRMLTARIIKKEEKPDDATGVPGTAGMPLDSKEVLASSMLQYDALGEAKPKLEALIKQEAKARRKRDFVCPTCKEDQLTEVAFAAHLKIHPLECLTCGKCFFRRSNLQLHIKMHLGIRNHKCEVCEKRFITRQKLIEHQNVHTGRTPVKCTICDDTFRRYSNMVQHRDRHHFQKKAKVRDFVCHCGAVFHSRAKLHWHQETHDGKPKACLYCSDKFVHAASLTRHIRRTHNIFFLSDRSKAKENVPCPVCKQMYLRSNLRAHLLTHSGKRPHLCVICNKSFSTKWNLKLHRWTHMSRSAKPFKCNLCKGAFIRQAEYISHMNAHKSFRPYTCNYCGCQFIRKYNCQRHVREHETAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFACNICGKTSSNKSNHNKHLKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01125758;
90% Identity: iTF_01125758;
80% Identity: -