Onub025098.1
Basic Information
- Insect
- Ostrinia nubilalis
- Gene Symbol
- Lztr1_1
- Assembly
- GCA_963855985.1
- Location
- OY979755.1:5401028-5406080[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 5e-14 2e-11 45.0 0.0 4 81 46 143 43 149 0.84 2 7 3.8e-05 0.016 16.3 0.0 51 81 165 195 155 201 0.84 3 7 6.2e-05 0.025 15.7 0.0 51 81 217 247 207 254 0.83 4 7 0.0001 0.041 15.0 0.0 53 82 265 294 250 298 0.83 5 7 2.9e-05 0.012 16.7 0.0 51 82 311 342 301 351 0.85 6 7 3.2e-05 0.013 16.6 0.0 51 81 359 389 348 396 0.83 7 7 8.8e-05 0.036 15.2 0.0 52 80 412 440 401 443 0.85
Sequence Information
- Coding Sequence
- ATGGTCAAACACAATACACGCACCAGAACCAGTCGTGCGAGACACCGAGCGGCCGGGTTAACGTCCATAAGCGTGGTGTCTGAGTCACTGCTATCGAACTACCCTCGCTGCACATTACACGACGACTTCGGGCGCATCCTCAAGTCGCAGCagttttgtgacgtcacgcttcTAGTGGGACCCGACAAAGTTCCCGCGCGCGCGCACCAAGCCATGCTCGCCGCGCGTTCGCAGTACTTACGGGCTAAGATCAAGGAGGCACGCGAAGAGCTATCCAAACGCATCGCCGCGGGCGAGGAGCCGGCGTCGGAGGTGTACTCGTACAAGGCGGAGCCGCGCCTCACGGTGCCGCTGCCCGAGGCCACGCCCGAGGCCTTCAGCATGGTGCTCAACTACATCTACACCGACCGGATCGACCCCACCGAGAAGGccaAGGGCATCGCCGCGGGCGAGGAGCCGGCGTCGGAGGTGTACTCGTACAAGGCGGAGCCGCGCCTCACGGTGCCGCTGCCCGAGGCCACGCCCGAGGCCTTCAGCATGGTGCTCAACTACATCTACACCGACCGGATCGACCCCACCGAGAAGGccaAGGGCATCGCCGCAGGCGAGGAGCCGGCGTCGGAAGTGTACTCGTACAAGGCGGAGCCGCGCCTCACGGTGCCGCTGGCCGAGGCCACGCCCGAAGCCTTCAGCATGGTGCTCAACTACATCTACACCGACCGGATCGACCCCACCGAGAAGGCTAAGCGTGTAGCCGCGGGCGAGGAGCCGGCGTCGGAGGTGTACTCGTACAAGGCGGAGCTTCCCGAGGCCACGCCCGAGGCCTTCAGCATGGTGCTCAACTACATCTACACCGACCGGATCGACCCCACCGAGAAGGCCGCGGGCGAGGAGCCGGCGTCGGAAGTGTACTCGTACAAGGCGGAGCCGCGCCTCACGGTGCCGCTGCCCGAGGCCACGCCCGAGGCCTTCAGCATGGTGCTCAACTACATCTACACCGACCGGATCGACCCCACCGAGAAGGCCGCGGGCGAGGAGCCGGCGTCGGAAGTGTACTCGTACAAGGCGGAGCCGCGCCTCACGGTGCCGCTGCCCGAGGCCACGCCCGAGGCCTTCAGCATGGTGCTCAACTACATCTACACCGACCGGATCGACCCCACCGAGAAGGcgaAGCGTATCGCCGCGGGCGAGGAGCCGGCGTCGGAAGTGTACTCGTACAAGGCGGAACCGCGCCTCATGGTGCCGCTGCCCGAGGCTACGCCCGAGGCCTTCAGCATGGTGCTCAACTACATCTACACCGACCGGATCGACCCCACCGAGAAGGGTAGGTCGTAG
- Protein Sequence
- MVKHNTRTRTSRARHRAAGLTSISVVSESLLSNYPRCTLHDDFGRILKSQQFCDVTLLVGPDKVPARAHQAMLAARSQYLRAKIKEAREELSKRIAAGEEPASEVYSYKAEPRLTVPLPEATPEAFSMVLNYIYTDRIDPTEKAKGIAAGEEPASEVYSYKAEPRLTVPLPEATPEAFSMVLNYIYTDRIDPTEKAKGIAAGEEPASEVYSYKAEPRLTVPLAEATPEAFSMVLNYIYTDRIDPTEKAKRVAAGEEPASEVYSYKAELPEATPEAFSMVLNYIYTDRIDPTEKAAGEEPASEVYSYKAEPRLTVPLPEATPEAFSMVLNYIYTDRIDPTEKAAGEEPASEVYSYKAEPRLTVPLPEATPEAFSMVLNYIYTDRIDPTEKAKRIAAGEEPASEVYSYKAEPRLMVPLPEATPEAFSMVLNYIYTDRIDPTEKGRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -