Onub005784.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ostrinia nubilalis
Gene Symbol
Hr39
Assembly
GCA_963855985.1
Location
OY979736.1:3889772-3909412[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.26 3.1e+03 -1.8 1.1 67 172 80 209 48 219 0.45
2 4 3 3.5e+04 -5.4 8.5 98 182 263 347 185 356 0.51
3 4 8.7e-08 0.001 19.5 0.1 1 20 438 457 438 471 0.91
4 4 5.3e-65 6.3e-61 208.0 0.0 164 408 500 756 467 756 0.85

Sequence Information

Coding Sequence
ATGTCGAGCGAGGTAGACCCCGTGAAGGTGGAAGGGGTTCACGTGTCAGTCACCACTATCAGCATGTCCGGCCCGGAGACCAATAACGTGAAGTTTTCGTACAGCTCAAGTGGGGTGCGCATCAGTGTGTCCTCGGACCCGCACGATGAGGACTCCACCGACGCCGAGGTCTCCAAGATCGACTTCACACAACATCAGAACGAGGTGAACATGCGCAACAAGAAGAAAAGGCCAGCCAGCGGCGCGCAGGCCGAGCCTCAGTCCAGCGACCGCGAGAGGCCCATGTCCTGGGAGGGAGAGCTGTCGGACTCCGAGATGGTTATAGACACCAGTGTCAATAATGATGAAAACAGCAGTTCTTTAGACCTGCAGTCGTCGCGGGATTCCATCGACACGCTGCGCAATGTCACCATCAAGACGGAGCCAAAAACCGAAGCCTTCCAGAGCCTGGATGACCACAGGGCCTTGGACCTCAAGTACCCCGCGCTGCAGCCGCATCAGAGGAGCCTCAGTATGAACAGGatatCAGTCCTCACAGACAACACCTCCCTCTCGTTAGCCAGGCGGCCTTCCTCTCCCAGCAGCGCCACGTCACTGGTCCTCGACCAGAACAACGTGCCAATCATGCCGCAGACCTCGCTAGGGGAGGTGCAGAACTTGACCATCAAGAAGGAAACGCAGCTGTCAGAGCTAAAATGCGAGCCGTCTGTAGGCATGGACAAGCTGTTAGGCGCCTTGCACGGATCACCCTTACTGGGCCGGCTACCACGGGTCCAGTCTAGCGCCAGTACCGACTCAGCAGTGCATTCCATGTACACGCACAGCGTATACAGCAGTCCTTCGGCCAGTCCTCGGGCCTCGCGGCACTACACGCCGTCTCTGTCGCGCAACAACAGCGACGCCTCGCACTCCTCCTGCTACTCGTACAGTTCGGAGTTCTCGCCCACGCACTCGCCTGTCCAGGGTCGACATCCGCATGTGGTATACCGAGAAGCGACAGCGCCGGTGTTTCCCGCGTCGCCCGCGCACGACGAGGACACGGAAACTGATGACAGGCTGCACCATCATCAGGGGATCAGCAGGCAGCAGCTTATCAACAGCCCCTGCCCCATCTGCGGCGACAAGATAAGCGGCTTCCACTACGGCATATTCTCGTGCGAGTCGTGCAAGGGTTTCTTCAAGCGGACGGTGCAGAACCGCAAGAATTACATGTGTTTGCGCGGAGGAAACTGTCCGGTGACCGTGGCTACCAGGAAGAAGTGCCCGGCGTGTAGATTCGACAAGTGCTTAGGGTGCGGGATGAAGCTGGAAGCAATACGAGAGGACAGAACGCGCGGCGGTCGCTCGACGTACCAATGTTCGTACTCGCTATCAGGCGCCGCGTCTACGGGCTCGCTGCTATCCGCGCACGTGCCGTCTACGCTGCGACATGCGAACAGTCTCACTTGCgTAAATGGCCCCGGGTCATATAACAGTAGAGGGGAATCGAGTAACAGTCGACTCACGCCTGACATACCCCCATTATTGCAGGAAATAATGGAAGTGGAGCATCTATGGCAATACAACGAGTCTGAACTGAACCGACTGGGCAAGTCCCCGGGGAGTCCCTCAGCGAACCCGCTGCTGGCCGCCAGCGGGATCACCGCGCAGAACTCCAGCCCGGACTTCTTGGCCGACCTGTGCAACATCGCGGACCACAGGCTGTACAAGATCGTCAAGTGGTGCAAGAGCTTGCCGCTATTTAAGAATATTTCTATCGACGACCAGATCTGCCTGCTGATCAACAGCTGGTGCGAACTGCTGGTGCTTTCTTGCTGCTACCGCGGCGTGGGCACTCCTGGAGAGGTGCGCGTGGGCGGCGGCCGCGGCATCACGCTGGACCAGAGTGCCAAGCTGGGCTTGACACCGTGTATAGAGAGAATGTTAAGCTTCACCGACCACTTGAGAAGACTACGAGTCGACCGATACGAATACGTTGCGCTGAAAGTCATCGTACTTCTGACGTCAGATACACCCGAACTCCGCGAATCAGAAAAAGTGCGAGCGTCGCAAGAGAAAGCGCTTGCAGCGCTTCAAGCGTACACAGCGGCGCACTCGCCTGATACTCCCGCCAAGTTTGGAGAGTTGCTCCTGCGCATACCGGAGCTACAGCGGACTTGCCAGTTTTTCATGCAAGTCGGCAAAGAGATGCTCAACCCGGCGAACAAAGGTAAAGATGGGGAGGGGCCAAGCTTCAACCTCCTTATGGAACTATTAAGGGGGGACCATTGA
Protein Sequence
MSSEVDPVKVEGVHVSVTTISMSGPETNNVKFSYSSSGVRISVSSDPHDEDSTDAEVSKIDFTQHQNEVNMRNKKKRPASGAQAEPQSSDRERPMSWEGELSDSEMVIDTSVNNDENSSSLDLQSSRDSIDTLRNVTIKTEPKTEAFQSLDDHRALDLKYPALQPHQRSLSMNRISVLTDNTSLSLARRPSSPSSATSLVLDQNNVPIMPQTSLGEVQNLTIKKETQLSELKCEPSVGMDKLLGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVVYREATAPVFPASPAHDEDTETDDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLSAHVPSTLRHANSLTCVNGPGSYNSRGESSNSRLTPDIPPLLQEIMEVEHLWQYNESELNRLGKSPGSPSANPLLAASGITAQNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVGTPGEVRVGGGRGITLDQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDTPELRESEKVRASQEKALAALQAYTAAHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKGKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01386822;
90% Identity
iTF_00806824;
80% Identity
iTF_01124693;