Onub026341.1
Basic Information
- Insect
- Ostrinia nubilalis
- Gene Symbol
- -
- Assembly
- GCA_963855985.1
- Location
- OY979756.1:11068732-11088520[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 34 4e-12 1.2e-08 35.4 0.1 7 50 276 321 272 330 0.88 2 34 1.4e-06 0.0043 17.6 0.1 28 49 339 360 324 362 0.87 3 34 1.1e-07 0.00032 21.2 0.0 13 50 366 405 358 407 0.80 4 34 1.6e-07 0.00046 20.7 0.0 14 50 411 449 408 451 0.80 5 34 1.9e-07 0.00056 20.4 0.0 14 50 455 493 452 500 0.81 6 34 1.5e-06 0.0043 17.6 0.1 28 50 511 533 497 535 0.88 7 34 1.5e-07 0.00043 20.8 0.0 14 50 539 577 534 579 0.80 8 34 1.9e-07 0.00056 20.4 0.0 14 50 583 621 580 628 0.81 9 34 1.5e-06 0.0043 17.6 0.1 28 50 639 661 625 663 0.88 10 34 1.5e-07 0.00043 20.8 0.0 14 50 667 705 662 707 0.80 11 34 1.9e-07 0.00056 20.4 0.0 14 50 711 749 708 756 0.81 12 34 1.5e-06 0.0043 17.6 0.1 28 50 767 789 753 791 0.88 13 34 1.5e-07 0.00043 20.8 0.0 14 50 795 833 790 835 0.80 14 34 9.8e-07 0.0029 18.1 0.1 14 48 839 875 836 887 0.80 15 34 6.5e-08 0.00019 21.9 0.1 6 50 884 930 879 932 0.79 16 34 1.1e-06 0.0032 18.0 0.1 14 48 936 972 933 976 0.78 17 34 1.1e-07 0.00033 21.2 0.0 13 50 988 1027 976 1037 0.81 18 34 1.5e-06 0.0044 17.6 0.1 28 49 1045 1066 1031 1068 0.88 19 34 1.4e-07 0.00042 20.8 0.0 13 50 1072 1111 1067 1113 0.81 20 34 9.8e-07 0.0029 18.1 0.1 14 48 1117 1153 1114 1165 0.80 21 34 6.5e-08 0.00019 21.9 0.1 6 50 1162 1208 1157 1210 0.79 22 34 9.8e-07 0.0029 18.1 0.1 14 48 1214 1250 1211 1262 0.80 23 34 5.4e-07 0.0016 19.0 0.1 13 48 1266 1303 1254 1321 0.79 24 34 9.6e-07 0.0028 18.2 0.1 28 50 1332 1354 1317 1356 0.87 25 34 1.6e-07 0.00046 20.7 0.0 14 50 1360 1398 1357 1400 0.80 26 34 6.2e-07 0.0018 18.8 0.0 25 50 1417 1442 1400 1444 0.74 27 34 1.8e-07 0.00054 20.5 0.0 14 50 1448 1486 1445 1494 0.81 28 34 9.6e-07 0.0028 18.2 0.1 28 50 1504 1526 1489 1528 0.87 29 34 1.1e-06 0.0032 18.0 0.1 14 48 1532 1568 1529 1572 0.78 30 34 3.7e-07 0.0011 19.5 0.1 6 48 1577 1621 1572 1637 0.79 31 34 9.1e-07 0.0027 18.2 0.1 28 50 1650 1672 1628 1674 0.88 32 34 1.6e-07 0.00046 20.7 0.0 14 50 1678 1716 1675 1718 0.80 33 34 1.9e-07 0.00056 20.4 0.0 14 50 1722 1760 1720 1768 0.81 34 34 2.6e-09 7.8e-06 26.4 0.0 28 70 1778 1816 1763 1821 0.89
Sequence Information
- Coding Sequence
- ATGTCGGAAGAAATGGCGTTGGGTGATAACGTTTCGAGCGATGATGCTAAGGTGAACGGCGAAGAAGCTGAGGCTGCGAGCGCCGTGGAGGCCGATGCGCCACCGTCAGAGGCTCCGCCCGAGCCAGAGGAGCCCCCAGCAGAGGACAAACCAGCCGAGGAATCGGTAAAAGATGCAGTGGACGAGACTGACTGTAAGCAAGAACTTGACGAAAAACCTGATGTCAAAGAAGAAAAATCTGACGTTAACGGTGAAAAAGCTGACATTAAAGATGAAAAGCCTGACATTAACGACGAAATACCTGACGTTAAAGGAGAAAAACCAGATATAAAAAATGAACTTGACATCAAGGATGAAAAACCTAACAATGACGCTCAGGAGTCGGATCAAGCGCCGAATGATGTACCAGCCGATCAGAACGATGCTGCTGGAGACAGTCAAGACATGGACGTGGATAAGGAAGCAGACCAGAAACGAGGATTGAAGAGAAGAGCATCGATTGCATTCAGCGATGCCGGTGACGATGAGTTTGTTGGCTTTGAGTTGCCGTACAGCAGTGACTTGAGCAGATATAACAGTGTTTTGGAACGCCTGGAGGCAGAAGTGTCGGCAGCCAGCAAAAGCTTCACTCCAGTGAGGCATGTGATGGCTACACCGCCTGCTTCAGTCCGAGCATCTAAGCGAGCCAGACAAGACACTGATGGATCAAGACCTTCATCTGCTTTATCATCAAGATCAGATGGCGATGGGACTGTCTCCTCAGAAGTAGCATCGTCTCCCCTAAACCGCGGCCGGCGCGCCACCATCGAGATGTCGTCGCCTCTGCTTCGGGTGCCTCTGGAGCGAGGATGGAAGCGCGAGCTGGTGTACCGCGCCGCACTCGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTgagtgatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAGtccatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGGGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTgagtgatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAGtccatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTgagtgatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAGtccatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTgagtgatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAGtccatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTGGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAGtccatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTGGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTAGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTAGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTgagtgatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAGtccatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTGGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAGtccatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTGGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTAGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTAGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGGCAAGAAGCTGCGCTCCACCCGGGAGGTgagtgatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTGGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGTTGTACCGCGCCGCACTCGACGCGCACTCGTGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGGGAGGTgagtgatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTGGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAGtccatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTGGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGGCAAGAAGCTGCGCTCCACCCGGGAGGTgagtgatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTGGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGGGAGGTGAgtgcatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGACGCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTgagtgatccggctcgaaggaccatcagCGCGAGCTGGTGTACCGCGCCGCACTCGCGCCGCAACGCAGACATATACTACTACACGCCGCAGGGCAAGAAGCTGCGCTCCACCCGCGAGGTGTCAGAGCAGTTATCTGGAACTGGATTGACATTGGAAAACTTTTCGTTCTTCAAGGAACCATTAGGGGTCGATGACCCAGAGAAAGAAATCATACGGGACGCAAAATTGATGCGTCGCGGTGAATCGCCCGTATCAGCACCCGCCGTGCCCGAAGGCAAGCGCGCGCCTAAACCCAAGCCGCCTAAAGGCGCCAGCCCCGAACCCACGCCCAAGTCGCCGCCTGCCAAACTGCGCGTAAAATCAATGGGCTCCCGGCTCAACAACAGCAATCCACCCGCGTCACCCGCGCCCGCCCCCTCCCCTGCCACCAAAGCCAAGAAGCCGGCCGATAACAACAACAGCGCGGCGTGGAAGAAACCCAGCGCAATTGGCCGTCCGGCGCGGGTACTGAGCGCGCGCGAGTGTAGTACCGCCGGcaggccgccgccgccgccgctgcagagccgcccgccgccggcgccgccgtCGCCGGAACAGGAGAGGCCTCCAGCGCGCCAAGTGATCCAACCGTGTTCCCTGACGTGTGGGCGCGGCGTGCCGTCCCTAGCGTGCGCCGCGTGCCTGTGCCTCTACCACCCGGCCTGTATACAGCATTACGGGCCAGTGCCGCAGCCGTTCTACTGTCGGAACTGCCGCAAATCATCATCACCACCGACAGAGCCGCCGCCCCTAACTCACAAATCCGGCGTGACTCCCGCCATGGCGTCTCTGCCCGCGCCGGTACCGCGCCGCGCGCCTGTCCCCGTGCCCGTGCCCGTACCCGTGCCCGTGCCTGTACCCGTACCCGTGCCCGTACCCAGGGTGGTGCGGCCTGAGAAGCGCGTGCTGCTTAGGATGAAGGTAGGTGTAGATCTTGGAACTGCCGCAAATCAACATCACCAACAGCCGCCACCTCTGACTCACAAATCCGGCGTGACCCCCGCCATGGCGTCTCTGCCCGCGCCGGTgccgcgccgcgcgcccgcgcccgtgCCTGTACCCATACCCGTGCCCGTACCCGTGCCTGTACCCGTACCCGTACCTAGGGTGGTGCGGCCTGAGAAGCGCGTGCTGCTTAGGATGAAGGCCGCCAGCGGCGGGCCGGAGGGCGAGCGCGTTTGGGCGGTGTCCGCGCCGCCGGGCGGGCGGCCGGCCGCGCCTTCCTTGCCGCAGTCGCTAGTGCGCCTCAACGGCCGCCGCTTCATCCTCGTGCCGCACCATAAGCCGCCGGTATGTGCCATACACCACACATCACTACACACCACTACGTTTGGGCGGTGTCCGCTCCGCCGGGCGGGCGGCCGGCAGCGCCTTCGTTGCCGCAGTCGCTAG
- Protein Sequence
- MSEEMALGDNVSSDDAKVNGEEAEAASAVEADAPPSEAPPEPEEPPAEDKPAEESVKDAVDETDCKQELDEKPDVKEEKSDVNGEKADIKDEKPDINDEIPDVKGEKPDIKNELDIKDEKPNNDAQESDQAPNDVPADQNDAAGDSQDMDVDKEADQKRGLKRRASIAFSDAGDDEFVGFELPYSSDLSRYNSVLERLEAEVSAASKSFTPVRHVMATPPASVRASKRARQDTDGSRPSSALSSRSDGDGTVSSEVASSPLNRGRRATIEMSSPLLRVPLERGWKRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSDPARRTISASWCTAPHSRRNADIYYYTPQGKKLRSTREVSPSGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSDPARRTISASWCTAPHSRRNADIYYYTPQGKKLRSTREVSPSGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSDPARRTISASWCTAPHSRRNADIYYYTPQGKKLRSTREVSPSGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSDPARRTISASWCTAPHSRRNADIYYYTPQGKKLRSTREVSPSGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREGKKLRSTREVSPSGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSDPARRTISASWCTAPHSRRNADIYYYTPQGKKLRSTREVSPSGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREGKKLRSTREVSPSGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREGKKLRSTREVSDPARRTISASWCTAPHSRRNADIYYYTPQGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSASGSKDHQRELLYRAALDAHSCRNADIYYYTPQGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSDPARRTISASWCTAPHSRRNADIYYYTPQGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREGKKLRSTREVSPSGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREGKKLRSTREVSDPARRTISASWCTAPHSRRNADIYYYTPQGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSASGSKDHQRELVYRAALDAHSRRNADIYYYTPQGKKLRSTREVSDPARRTISASWCTAPHSRRNADIYYYTPQGKKLRSTREVSEQLSGTGLTLENFSFFKEPLGVDDPEKEIIRDAKLMRRGESPVSAPAVPEGKRAPKPKPPKGASPEPTPKSPPAKLRVKSMGSRLNNSNPPASPAPAPSPATKAKKPADNNNSAAWKKPSAIGRPARVLSARECSTAGRPPPPPLQSRPPPAPPSPEQERPPARQVIQPCSLTCGRGVPSLACAACLCLYHPACIQHYGPVPQPFYCRNCRKSSSPPTEPPPLTHKSGVTPAMASLPAPVPRRAPVPVPVPVPVPVPVPVPVPVPRVVRPEKRVLLRMKVGVDLGTAANQHHQQPPPLTHKSGVTPAMASLPAPVPRRAPAPVPVPIPVPVPVPVPVPVPRVVRPEKRVLLRMKAASGGPEGERVWAVSAPPGGRPAAPSLPQSLVRLNGRRFILVPHHKPPVCAIHHTSLHTTTFGRCPLRRAGGRQRLRCRSR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -