Onub026145.1
Basic Information
- Insect
- Ostrinia nubilalis
- Gene Symbol
- -
- Assembly
- GCA_963855985.1
- Location
- OY979756.1:8534508-8534819[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7 5.7e+03 -1.9 0.1 35 42 3 10 1 11 0.77 2 2 1.1e-12 1.1e-09 38.8 0.0 2 39 16 54 15 59 0.87
Sequence Information
- Coding Sequence
- ATGGTGCGGCATTATAAAAGAAAGACAGATAAAGCTTCTTATTCAAAAGAAAAGTTACAAGATGCCGTGCGTGCTGTTAGAAACGGAGAGTTAAGTGGATACAAGGCAGCCCAAATTTATAACATACCGAGAATGACGATTATGGACCATGTCAATAAGAAAAGAGTAAAATCTAATACTCTCGGAAGATGCACAGCTCTTTCTCGAGAAACCGAACATAAACTAGCATCATATCTGCATACAATGGAACGTTACGGATTTGGATTGAGCAGACAAGAGGTGTTAGAAATGGTTGGGTTGGTCATTACGTGA
- Protein Sequence
- MVRHYKRKTDKASYSKEKLQDAVRAVRNGELSGYKAAQIYNIPRMTIMDHVNKKRVKSNTLGRCTALSRETEHKLASYLHTMERYGFGLSRQEVLEMVGLVIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071569;
- 90% Identity
- -
- 80% Identity
- -