Basic Information

Insect: Ostrinia furnacalis
Gene Symbol: -
Assembly: GCA_004193835.1
Location: NW:6710-27412[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 1.4e-05 0.00068 19.7 1.5 1 23 202 224 202 224 0.99

2 29 0.00062 0.031 14.5 1.0 2 20 254 272 253 274 0.93

3 29 0.00017 0.0085 16.3 0.3 2 23 304 326 303 326 0.96

4 29 0.36 18 5.8 0.5 1 23 375 398 375 398 0.95

5 29 0.011 0.55 10.6 0.1 1 23 414 436 414 436 0.95

6 29 0.0015 0.072 13.3 4.5 2 23 479 501 478 501 0.95

7 29 0.00086 0.042 14.1 4.2 2 23 545 567 545 567 0.97

8 29 0.047 2.3 8.6 1.0 1 23 617 640 617 640 0.95

9 29 0.031 1.5 9.2 0.2 1 23 695 717 695 717 0.97

10 29 0.0048 0.24 11.7 4.1 2 23 729 750 728 750 0.96

11 29 0.031 1.5 9.2 1.5 2 23 762 783 761 783 0.96

12 29 0.0029 0.15 12.4 2.2 1 23 793 815 793 815 0.98

13 29 0.0044 0.22 11.8 5.4 2 23 845 866 845 866 0.97

14 29 0.00046 0.023 14.9 2.5 1 23 877 899 877 899 0.98

15 29 4.4e-05 0.0022 18.1 0.5 1 23 907 929 907 929 0.97

16 29 0.00059 0.029 14.6 0.4 2 23 949 971 948 971 0.97

17 29 1.7 86 3.7 0.7 1 23 989 1011 989 1011 0.89

18 29 2 1e+02 3.4 3.3 1 23 1018 1040 1018 1040 0.90

19 29 0.27 13 6.2 7.6 2 23 1051 1073 1050 1073 0.95

20 29 0.00077 0.038 14.2 0.3 1 23 1095 1117 1095 1117 0.97

21 29 0.018 0.9 9.9 0.6 1 23 1197 1219 1197 1219 0.93

22 29 1.3 62 4.1 4.5 5 23 1229 1247 1226 1247 0.94

23 29 0.013 0.64 10.4 0.8 2 23 1258 1280 1257 1280 0.95

24 29 0.12 5.9 7.3 2.3 2 23 1297 1315 1297 1315 0.91

25 29 0.29 14 6.1 2.3 2 21 1319 1338 1318 1339 0.94

26 29 2.5 1.2e+02 3.2 0.9 2 19 1360 1377 1360 1381 0.92

27 29 0.2 10 6.6 0.4 2 23 1388 1409 1387 1409 0.93

28 29 0.0029 0.14 12.4 0.8 2 23 1420 1442 1419 1442 0.96

29 29 0.0095 0.47 10.8 2.8 2 20 1480 1498 1479 1500 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	1.4e-05	0.00068	19.7	1.5	1	23	202	224	202	224	0.99
2	29	0.00062	0.031	14.5	1.0	2	20	254	272	253	274	0.93
3	29	0.00017	0.0085	16.3	0.3	2	23	304	326	303	326	0.96
4	29	0.36	18	5.8	0.5	1	23	375	398	375	398	0.95
5	29	0.011	0.55	10.6	0.1	1	23	414	436	414	436	0.95
6	29	0.0015	0.072	13.3	4.5	2	23	479	501	478	501	0.95
7	29	0.00086	0.042	14.1	4.2	2	23	545	567	545	567	0.97
8	29	0.047	2.3	8.6	1.0	1	23	617	640	617	640	0.95
9	29	0.031	1.5	9.2	0.2	1	23	695	717	695	717	0.97
10	29	0.0048	0.24	11.7	4.1	2	23	729	750	728	750	0.96
11	29	0.031	1.5	9.2	1.5	2	23	762	783	761	783	0.96
12	29	0.0029	0.15	12.4	2.2	1	23	793	815	793	815	0.98
13	29	0.0044	0.22	11.8	5.4	2	23	845	866	845	866	0.97
14	29	0.00046	0.023	14.9	2.5	1	23	877	899	877	899	0.98
15	29	4.4e-05	0.0022	18.1	0.5	1	23	907	929	907	929	0.97
16	29	0.00059	0.029	14.6	0.4	2	23	949	971	948	971	0.97
17	29	1.7	86	3.7	0.7	1	23	989	1011	989	1011	0.89
18	29	2	1e+02	3.4	3.3	1	23	1018	1040	1018	1040	0.90
19	29	0.27	13	6.2	7.6	2	23	1051	1073	1050	1073	0.95
20	29	0.00077	0.038	14.2	0.3	1	23	1095	1117	1095	1117	0.97
21	29	0.018	0.9	9.9	0.6	1	23	1197	1219	1197	1219	0.93
22	29	1.3	62	4.1	4.5	5	23	1229	1247	1226	1247	0.94
23	29	0.013	0.64	10.4	0.8	2	23	1258	1280	1257	1280	0.95
24	29	0.12	5.9	7.3	2.3	2	23	1297	1315	1297	1315	0.91
25	29	0.29	14	6.1	2.3	2	21	1319	1338	1318	1339	0.94
26	29	2.5	1.2e+02	3.2	0.9	2	19	1360	1377	1360	1381	0.92
27	29	0.2	10	6.6	0.4	2	23	1388	1409	1387	1409	0.93
28	29	0.0029	0.14	12.4	0.8	2	23	1420	1442	1419	1442	0.96
29	29	0.0095	0.47	10.8	2.8	2	20	1480	1498	1479	1500	0.94

Sequence Information

Coding Sequence: ATGGCCCTCAAGCTGGGGAAATGCAGACTTTGTCTGAAGCTTGGCGACTTTTACTCCATCTTCACCGTGGACAATGCCATCCAACTGGCAGAGATGGTCATGGAATGCGCCCGGGTGAAAATCTACGATGGCGACGGGCTTCCCGACAAGATTTGTTCCGAGTGCGTACAGAAGCTCAGCAGCGCATACATCTTCAAGCAGCAGTGCGAGCGCTCTGACCAGGAGCTGCGCAGGAACTATGTGCCGCCGCCGGGTTTCAGTATCACGCCCCCACCGCCACAAAACAGACAAAGCAGCGATTCCGCGTTCTCGTCCCAAACTGACATCTCGAACCAGACCAAGCCGTCTTCCTCCAACGAGAACGCCGTCACGCCGGCCAGTCGCTCGCGCAAGCGCAGCCGCGAAAGCGCCGACAACACCTCCGTCAGTAGTCGTTCCCACGACTACGCGCCCGCCACAAAACGCGTCTCCGAACTCCGCGATTCCCAAAAGAAACGCCGCGTCCAAAACTCCTACGAGGACGACTCCGACTACGAGGACCACATGTCGACCTCCCAGTTCTCCGCCGGCACCGACTCCGACGAGCCGCTCCTCAAAAACTCCTTCAAGTGCAAAAAGTGCGAAAAGTCATTCGCGAGCGCCAAAAGTTTAGCCCTCCACAGCCGGACGCACAAAAAGGACAGCCTCGGCCAGAACGAGGTGGTCAACATCCCGAAACCCGCCCCTTCGGAGGACGCGACCGACGACGACGACAAGCTGTCGTGCGACAAATGCGGGAAGACGTTCAAGCTGAAGATAATGCTGAAGCGGCACCACGACCTGTGCGGCGTCATCGCCGAGGTGTCCCCGCAGAAGGAGTTGCTCGTGTCTCTCGAGCCGATCGACGCACCGGTTCACCCGAAAAAGATCGAGTGCGAGATATGCACGTCCAAGTTCAAATCGATCGATAATCTGAACAAGCACTTGCGAGTGGTGCACGCGGCGGCGCCGAAACCGGATCCGTCGCCGGTGAAAGAGAAAAAAGTGTCGGTGCCGTGCATATTCTGTCGGAAGCAGTTCGACGACTACTACGTGTATACGGCGCACCACAACAGCTGCAACAAGCGGCGGGAGTTGGACGCGTTCTCGTGTCCGGTGTGTAAGCGGTTGTCGGGGAAGCGCAGCGCGTTCTTCGTTCACGTGAAGAACCTTCATTTCGAGCGCGGGTTGTCTGGTAAAGAGGAGCCGCGGGCCGAGGCGTTCGACTGCCGCGTGTGCAGCAAGCGGCTGGCGTCGCAGGAGCAGCTCATCACGCACCTGGCCGCGCATATGTCCCACATTGATGAGCCCGAGGCCGCCGCCGACGACGAGTCCAGGGCTAGCACCTTAGACGATTCTGCATCGATTACGTCGGCGGACTACACCAGCTCAAAATACGTTTCCAACGGACCTTTAAAGTGTGGTATCTGCGACAAACGGTTCACGTACAAGAAGGCGCTGGTCACGCACCACGAGCGCTGCCACGCGAATATGGAGCTGCAGGTGAAGGTCGAGCCGCCTGATAAGATGCCCGAGCAGGACAATCCGAATCTTCTCAGCGAGACGCGAGCACCTTCCGAATCAGAATCGAGCGACGAGGAAGGCGACGACAACACGTGTGATATATGCGAGAAACATTTCTCATACAAGCGGCTGCTATTGCAACACAAGCGCACCAAACATAACCTAAGCTCGGGGACCAAGCGAGCCAAGATCACGCTCAAAGACTGCTCTGTGAGGTGCCTCATCTGTGACTTGGAAATGAAAGTCAGCGCCATCAACGAGCACAACCAGAAGCACATCTCGGTGAACATCAAGCCGCGCAACGTTTACACGTGCGCCGAGTGCCAGGACAAGTTCAAGAGCTGCAGCGCGCTGGCCGGACACATCAAATTTGTTCATAGATTAAAACAGCCGCGAGCGCCGAAAGCGCCGCGTGCCCTCGAAGGCGGTTCGGAGTTGGCGGATTTTTGCGAGGTCGTTGTGACTAAGGCGGAACCCCTGGACGCGCTCCAGGATCACAACGACCCCGGAGCAGTTCCGCCCAGTGTCAGCGCCGCCGGGTTTACCTGCCCGCTGTGTACTAAACGAATGCCCACGCTGTTGGCTCTCAAACGGCATGTTAATTGGCATACATATCGTGGGAAAGACCTGGAGAAGAATATTGAATGCGCCGTGTGTAAGGAGACCTTCCGTTTCCAATGCCACTACAAGTTACACATGCGCGGGCACTACCGGGACCCGAACTTGGACCCGGTGCACCTCACGTGCCCCATCTGCAACCGCAAGAGCAAGCATTTAAGAGCGGCCCAGATGCACATGAACTACCATAAGCAGACGCGCTTCAATACTGCCGACTATCAGTGCTCGATTTGCAAGCGAGTCTTCCAGCATCGGAAGgTGTACCTCTCGCACATGGCCATCCACTTCAAGCGCGGCGAGAGCGGCCAGAACACCATCGTCGGTGACGTCACGCCCAACAACGCCGACAAGACGCGCTTCGACGGAACCAACACCTGCCACCTCTGCGGAAAGGTCTGCGACTCCGAAAACTCGCTCAAGCACCACGTGCGATGGCACAACTCCAAGTCTTCCTTATACGGAGCACGCCACGAGTGCCAGTTCTGCCAACTAGTCTTCACGAATAAGCGCCGTTTAGAAATCCATATAAGATCACATTACGAGGACGACAACGGACCCTTCAAGTGCACTATCTGTGGGAAGGGATACATCGACGAGGAATACTTTCGAAGACACGTTAAAGGACACAACTTCGACCACCAGTCACATAAGGATAGAATCGATAAGTTAAGAAAGGATAAAGTCAAGTGCCCGATCTGCGCTCGCTTCTATCCAGACTTGATCCATTTGATACGGCATCTGAGACGCACCCATCCTGAGAGCAAAATGATCAAGACCGATCCTGATGCGCCGGCGCCGGTCTACTTTTCCTGCAAGCTGTGCGCCAAAGTGTTTCTCGACGAACGCCGCTTCCAAAAGCACGAGGAGGCCCATATGAGAAAGCCGCAGTTCTTCAAATGCAAATTCTGTGGGAAAAACACCATCTCGATGAAAACCCACAACCTCCACATCAAGGGTCACCTAACCCAGAAGTACCTAGACGAACCGCTGAAGTGCATGCACTGCGACGAAAAGTTCTACAAGGGCTACCATTTGCACCACCATTTGAGGGATGCGCACCAGATCAATGAAACGTGGATCGCCGAGCGCACCGAGCCCACTCTTAGCGGGCCTTTGAAAGAGTTCCAGTGCTCAGTTTGCCTGAAGGTGCTCGCCAGCAAAGGAAACTTCGAGCGGCACATCGACTACCACAATACCCTGCGTTGCAACTACTGCTTCGACTACTTCAGCACCATCCGCTTCCTGGAAGGCCATCTGGCCTTCAGCTGCGACAAGAAGAAGCTCCTCGGGGACACCGAGCCCCATCTAAGGAGGATCAAGTGCCACGTCTGCTACAAAGCCTTCCACTTGCAGGTCAAACTGGACTGTCACTTGCGGACGCGACACGGGATCAAAGTGAATAAAGAAGCGTCGAGCGGGAAAAAGGAGTTCGTCTGCGATTTCTGCTTCCGCGTATTCGAGAATGAGGACTCGCTGACCGGGCATAAGGTCTACCACCGAACCATCGGCTACTACGGCTGCATCTACTGCAAGCGGAAGTTCAACACGCTGACTTTGTACCGCAAGCACAAGAACCACCACTTCTCCCAGCTTAACGTCGACAACCCTACCAAGTGCGAGCACTGCGACGAGACTTTCGTCGCCTTCCGCGAGATGATTTACCACATGCGGGATGTCCATAACGACGATAAGGAGTGGATCATCATGCCTAAAGACTCTATAGAGGAGACGTGCCCGATATGCAACAAAGTGTTTTTCAATCTACACAGACATCTGGAATACCACGAGGAGAACAAGTGCAAGAAATGCAACGAATACTTCTACTCGCGCGCCGATTATGACAACCATTTATGCTCGATCGAAAGCGACGACGAGGAGGCAGGCCCGAGCGAGAATAGCTCGCTTCCGGCGTATGAAGAGTGCGAGTTCTGCTTCAAGCCGATCACGAGAAAATCCTCGAAACGTAAGCACGACATCATCCACCGCGGCTCCGGCTCGATCTCCTGTCGTTTCTGCCCGCTCAAGTTCAAGACCATAGACGCGTTTAACATCCACGCGTTCTCGCACCGCAGCAGAAAGTACAATAAGCGGCCGATTAAATGTCGGAAGTGCGGCGAGAAGTTCGTCAAGTACGGGCCGTTTATGAAGCACATGAAAAACGTGCACAAATCCACGAAGAAAATTCACTATCGTGCCATTGTGAAGCCGGAGAGATGCGTCGTTTGCGGAGGAGACTTCCCCAATCTACACAATCACTACCGCGCGCATTTACTCAACCAATGCCAGCTTTGCGGCAAGTACTTTTCGTCCTCAAGACTGTTCTCGAGACACCGCTGCGACCAGGAAGACGCCGATCCCTCTAAAGTGTTTGTCTGCGACAAGAACCTCGACGCGCTCATCAACTCATACGTCCCTAAAGACTTGAAGGACGACGAGAAGTTCTACGGGGGTTCCGAAGACGAGGATGAGGAAGAACCGACTGAACCGCCAGTTGCTTTAGAGGCGAAGGAACTGAAAGCGTCGATGTCTCAAGACGAGGACAGTCAGGCTGCCGACATGACATTCTCGCAGGACGAAGCCAGCCAGGAAGAGAAAGAATTCACTCAAGAGGAGCGGGAACTTCACCAGATGGTATCCTCGCCGATCATATCCGACGTGTTATCGTTGTATCAGCAAAGCCAAAGCACCGAAGACCGCAAGCAGATCGTCAATGAGAAGGATATTGTTTCCCTGATCGACGACGATTCGTTGGACATGGACGTCGTCAGTATTCCTGTAATTACGATTGATTAA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNAIQLAEMVMECARVKIYDGDGLPDKICSECVQKLSSAYIFKQQCERSDQELRRNYVPPPGFSITPPPPQNRQSSDSAFSSQTDISNQTKPSSSNENAVTPASRSRKRSRESADNTSVSSRSHDYAPATKRVSELRDSQKKRRVQNSYEDDSDYEDHMSTSQFSAGTDSDEPLLKNSFKCKKCEKSFASAKSLALHSRTHKKDSLGQNEVVNIPKPAPSEDATDDDDKLSCDKCGKTFKLKIMLKRHHDLCGVIAEVSPQKELLVSLEPIDAPVHPKKIECEICTSKFKSIDNLNKHLRVVHAAAPKPDPSPVKEKKVSVPCIFCRKQFDDYYVYTAHHNSCNKRRELDAFSCPVCKRLSGKRSAFFVHVKNLHFERGLSGKEEPRAEAFDCRVCSKRLASQEQLITHLAAHMSHIDEPEAAADDESRASTLDDSASITSADYTSSKYVSNGPLKCGICDKRFTYKKALVTHHERCHANMELQVKVEPPDKMPEQDNPNLLSETRAPSESESSDEEGDDNTCDICEKHFSYKRLLLQHKRTKHNLSSGTKRAKITLKDCSVRCLICDLEMKVSAINEHNQKHISVNIKPRNVYTCAECQDKFKSCSALAGHIKFVHRLKQPRAPKAPRALEGGSELADFCEVVVTKAEPLDALQDHNDPGAVPPSVSAAGFTCPLCTKRMPTLLALKRHVNWHTYRGKDLEKNIECAVCKETFRFQCHYKLHMRGHYRDPNLDPVHLTCPICNRKSKHLRAAQMHMNYHKQTRFNTADYQCSICKRVFQHRKVYLSHMAIHFKRGESGQNTIVGDVTPNNADKTRFDGTNTCHLCGKVCDSENSLKHHVRWHNSKSSLYGARHECQFCQLVFTNKRRLEIHIRSHYEDDNGPFKCTICGKGYIDEEYFRRHVKGHNFDHQSHKDRIDKLRKDKVKCPICARFYPDLIHLIRHLRRTHPESKMIKTDPDAPAPVYFSCKLCAKVFLDERRFQKHEEAHMRKPQFFKCKFCGKNTISMKTHNLHIKGHLTQKYLDEPLKCMHCDEKFYKGYHLHHHLRDAHQINETWIAERTEPTLSGPLKEFQCSVCLKVLASKGNFERHIDYHNTLRCNYCFDYFSTIRFLEGHLAFSCDKKKLLGDTEPHLRRIKCHVCYKAFHLQVKLDCHLRTRHGIKVNKEASSGKKEFVCDFCFRVFENEDSLTGHKVYHRTIGYYGCIYCKRKFNTLTLYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDVHNDDKEWIIMPKDSIEETCPICNKVFFNLHRHLEYHEENKCKKCNEYFYSRADYDNHLCSIESDDEEAGPSENSSLPAYEECEFCFKPITRKSSKRKHDIIHRGSGSISCRFCPLKFKTIDAFNIHAFSHRSRKYNKRPIKCRKCGEKFVKYGPFMKHMKNVHKSTKKIHYRAIVKPERCVVCGGDFPNLHNHYRAHLLNQCQLCGKYFSSSRLFSRHRCDQEDADPSKVFVCDKNLDALINSYVPKDLKDDEKFYGGSEDEDEEEPTEPPVALEAKELKASMSQDEDSQAADMTFSQDEASQEEKEFTQEERELHQMVSSPIISDVLSLYQQSQSTEDRKQIVNEKDIVSLIDDDSLDMDVVSIPVITID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00075787;
90% Identity: iTF_01125692;
80% Identity: -