Basic Information

Insect: Ostrinia furnacalis
Gene Symbol: -
Assembly: GCA_004193835.1
Location: NW:57411-68108[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.005 0.25 11.7 1.5 3 23 208 229 207 229 0.96

2 23 0.15 7.3 7.0 0.3 1 22 618 639 618 639 0.95

3 23 4.8 2.4e+02 2.3 0.3 1 22 680 701 680 703 0.82

4 23 0.024 1.2 9.5 2.3 2 21 713 732 712 733 0.94

5 23 0.34 17 5.9 0.1 2 23 741 763 740 763 0.89

6 23 0.015 0.74 10.2 0.4 3 23 783 804 781 804 0.96

7 23 0.0017 0.082 13.2 3.1 1 23 810 833 810 833 0.96

8 23 0.089 4.4 7.7 0.0 1 23 859 882 859 882 0.90

9 23 0.0039 0.19 12.0 3.5 1 23 887 909 887 909 0.97

10 23 0.012 0.58 10.5 0.2 1 23 915 938 915 938 0.95

11 23 0.00074 0.036 14.3 1.3 1 23 951 973 951 973 0.98

12 23 0.001 0.051 13.8 4.0 1 23 1022 1045 1022 1045 0.96

13 23 0.0048 0.24 11.7 1.8 1 23 1108 1131 1108 1131 0.96

14 23 0.00078 0.039 14.2 2.1 2 23 1149 1171 1148 1171 0.95

15 23 0.062 3.1 8.2 0.1 2 23 1177 1199 1176 1199 0.93

16 23 0.016 0.8 10.1 0.2 1 21 1244 1264 1244 1265 0.94

17 23 0.00087 0.043 14.0 0.6 1 23 1275 1297 1275 1297 0.93

18 23 0.00025 0.012 15.8 0.2 2 23 1387 1409 1387 1409 0.93

19 23 8.1e-07 4e-05 23.6 1.3 3 23 1416 1436 1415 1436 0.98

20 23 0.0033 0.16 12.2 1.1 1 23 1455 1477 1455 1478 0.93

21 23 0.086 4.2 7.8 0.0 1 23 1499 1521 1499 1521 0.97

22 23 0.0067 0.33 11.3 0.3 1 23 1527 1550 1527 1550 0.96

23 23 0.00018 0.0089 16.2 0.4 1 23 1558 1581 1558 1581 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.005	0.25	11.7	1.5	3	23	208	229	207	229	0.96
2	23	0.15	7.3	7.0	0.3	1	22	618	639	618	639	0.95
3	23	4.8	2.4e+02	2.3	0.3	1	22	680	701	680	703	0.82
4	23	0.024	1.2	9.5	2.3	2	21	713	732	712	733	0.94
5	23	0.34	17	5.9	0.1	2	23	741	763	740	763	0.89
6	23	0.015	0.74	10.2	0.4	3	23	783	804	781	804	0.96
7	23	0.0017	0.082	13.2	3.1	1	23	810	833	810	833	0.96
8	23	0.089	4.4	7.7	0.0	1	23	859	882	859	882	0.90
9	23	0.0039	0.19	12.0	3.5	1	23	887	909	887	909	0.97
10	23	0.012	0.58	10.5	0.2	1	23	915	938	915	938	0.95
11	23	0.00074	0.036	14.3	1.3	1	23	951	973	951	973	0.98
12	23	0.001	0.051	13.8	4.0	1	23	1022	1045	1022	1045	0.96
13	23	0.0048	0.24	11.7	1.8	1	23	1108	1131	1108	1131	0.96
14	23	0.00078	0.039	14.2	2.1	2	23	1149	1171	1148	1171	0.95
15	23	0.062	3.1	8.2	0.1	2	23	1177	1199	1176	1199	0.93
16	23	0.016	0.8	10.1	0.2	1	21	1244	1264	1244	1265	0.94
17	23	0.00087	0.043	14.0	0.6	1	23	1275	1297	1275	1297	0.93
18	23	0.00025	0.012	15.8	0.2	2	23	1387	1409	1387	1409	0.93
19	23	8.1e-07	4e-05	23.6	1.3	3	23	1416	1436	1415	1436	0.98
20	23	0.0033	0.16	12.2	1.1	1	23	1455	1477	1455	1478	0.93
21	23	0.086	4.2	7.8	0.0	1	23	1499	1521	1499	1521	0.97
22	23	0.0067	0.33	11.3	0.3	1	23	1527	1550	1527	1550	0.96
23	23	0.00018	0.0089	16.2	0.4	1	23	1558	1581	1558	1581	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAATTATGATCGTGTTTGTCGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTTCTCGCTTCGAAAATCAAGGATTGCGTCTCTGTACAGATAAGCGAGAATGACGACCTGCCGACGAATGTCTGCAGGAAATGTGTGGATAATGTCAATAACTGGCATATTTTCAAGACAGTATGTGAAAGGACACAAAACAAATTAGAGTTGCTGATAAAAAAGGATGGCAGCCAACTAGAAGAGataaaaataaagagtGAACCTGCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGGTCATACCCTGACAATGAGAATGCAGCAGGTTCCAGTAAGGTGCAGCCAGAAGGTCCACCTATCTTGGCGTCATTGGGGCTCACTCCACGAAGTGATAAGGGTATCGAGAGTGATAAAGAGGAAGAAGAGGAAGACGACGAGGAGGAGATGAGGGAACCTCCACAGAAGTATACCAAAGTGCCCAACATGCCTGAGGTATCCATCACGGTAATGCGGCCCACCGGCGAGACCCTGCATGCAAGGCAAGGCATCCAGCAGCTCGCCTCCAAGGACTGCCTCGTCTGCGGCCGCTCATACAGGTACTCCCACAACGCGCGCCGTCACGAACTCACGTCACACAGCTTCgataggtacaccaacaaagtcgtCAACAAAAAACAACCCTCCCACATGCAACCGAAACTAAGACCAAACCCGTTCAACCCCAAAGCCCGCCTCATGCCAAACCCCATCAGCCACAAAATGCAACTCCTCAAACAACCGATGCCTTCGAAAGTAGCACCACACAAAGTTATCACTCCACCGAAACCGATACTTATTAAAACGCCTAAAGGAGCTCAAAATAATCTGCCGTATCCTCTGCGCATCAAAGCGCTTAAAGAtttgcaaataaagaaaaaggaACCGCAAATTTTGAAGACCCTCCTAACGTCCAAACCAGAAGTTCTCGTGTCCGAACCTGAAATTGTTAACTCGGGCCCAGAAAGTCCCGAAACGTTGATTTCCGAACCAGAAATTGCATCTTTCCAAGTGGAAACCATTTTGTCAGAGCCGGATGGATTCGACCACCAGGGTGATGGTGATGAAGAAATGGACGGCGACATGACTAACAACCAAGGTCAAAACTATGACACGGTCGACATGGAATCGGACAACGAAATAGAGATAGCGCGTGAGCAGGAGAATGAAGGAGAAGTTGAAGGTGAAGACGATGATAATAATGCCGAAGATGGAGAAGAACATAACCAAAATGATGAAGAAATTAATCACTATGAGCAAAATAGTGAAAACGAGAAAGATCCAGCAGAAGAAAATGAACCAGAACACAGTGAAGAGCATATCGGCATCGATGAAAGTGACCTCCAAGCTGCAGAGGAAaatcaagaaaaagaagatggAATCGAGGACGGTGATAATGATCATGAAATGAATCACGATGAGATTAGGGATGAAGATGACGATGATCTCCCTCCGATGGAAATAGCACCAGAAGTAGAAATAAATGAGGATATGCAAACAAATTCCTACAACAGTGAAGTTAATGAGGAGGAGGAGGAGGAACTTGAAGAATCTGCTGATCTAAATGACACAGCAGAAGAAGGCGTCAAAGAACTGGATCCTGACAAGTTGTACGTCACTAAAACACAAAGAGATTTCATTCTCAAATATCGCGACATCATCCaacaaatcaatacaaaacggtGTCTATGTTGTGATCGTGAGCATCCCCGGAGAAAGGCGGTCATCCAACATTTGCAAAAGAATGGACACAAAGTTCCTAAACACACCTGCTACAACTGTGTTATAACCTTCGGACACATTGGCGCCCTGCTCAGCCACATGAGGTCCAACAGTTGCACAGATTTATGGAAAATAAtctacaacgaaaatggaataACTGACGACCTAGTATTGGAAGAGCCAAAGGATAATAAAGTCCAGTATAAGGACATCTTTAACGCAAGATCTTATGCTTGCAAATTATGTCCAGCCAAGTTCCAATTAAAGCAGTTCATAATGAAACATGTTTTGGATGTTCATGAAGATGGCCAGTCTAGGGTGCCCCTCCACTGCGTTCATTGTAGAGCACGATTCAAAGATAAAAGTCTTATCAAAAAACATATCCGTAACGGTGAATGCACAGTCATAATATCATGTGATTTGTGTTCTGAAAAGTTTGTCAATATGCAAGATTTCAATGATCACGCTTTGGCCGTTCATGCCGGAAGCTTTGACTCTGATAGTCAAAATAAGTGTGTTGATGGACGACCCACAGATTGTTCGCTTTGTGGAAAAAAGAATAGTAGCTATCCAAAtttgataaaacatttaaaGATGGTTCACAACGAGGATAAACCACATTATTGTCAACACTGTGATGGCAAATTTGAACAAGCTACTGATCTTAACAAACATATTTACACTGAGCATTCTGATAGGACCTTGGGTATGCAAAGCACCGAACCTGATATGTCCTTGGTCAAGGAAGAAGCTGAGGAATATCATTATTCGTGTACTGAGTGTAATGCCATATTCGAAACCGTTGACGCTTGGACGGATCACCAGGTCGCTGAACATAATCAAGTCGCTCATCATTGCGACCAGTGTGACAAGAAGTTCTTACGTCCATCTGAGCTCGCCGAGCATAAGAACACCCATCTGCGTGTCAAATTTTATCCTTGCAGCGTTTGTACAAATTCCTACAGTACTCCACAAAAACTTTCAGAACACGTTCAACAAGCTCACCCAGGCGCTGGGTCATTCCCGACGATGGATTCAGAGTTCTATTGTGACATATGCATACGATCATTCAAAAGTCGTCAAGCATATTCTAATCACATGCGCATTCATGCTAAAGTGCCCACGACCAATAGAAAACCCGGAGAACCAAAGGGTTTTGCTCCACAAATCATTGGCAAACCAATCAAATCGTTTACTGCCGTACAACCTGGTTTTGTAGCCTTCAAACCAAATTGCAATGTTCCTAATGCTCCTTACTGTTGTGATATATGCGGCAAAGGATTTATGCACAAGAAGAACATTTGGAAACACAAGAAAGTGCTTCACGCTGACCTCATCAACGATAGGAATGACAGTGAAGAAAATACCATGCAAGCGTCCACAGAAGACGATGAATATAATGCAGATGAAAGTGGAGCCATTCTGTCGACGCCACAGTTTAATAGTTTCAACTTCACGAACTTTGCCAATAACGTTCAACAATCGACGCCTCAGGGTCAAGATCTGCTGCCATTCTCGTGTGAACTTTGTTTCAAACGGTTTCCTCTTCGAACCAGTTTGTGGAAGCACAAGCGAGCCAAACATGGAATATCTGGATCTGATAACCAGCAGCCAAGCGAAGCTGGTAGCAGATCTAGTTGCACGATTTGTAAAATTACCTTTTCAGATAAGAAGTCATACTACCGTCACAGGAAGAATGTTCACAAATCGTCATCCCAGATGTGTAAGATCTGCGGCAAGCCACTGAATTCGACATTGGAGCTGTATGAACATCTCAAAGCTGCTCACGCACGCGAACTATTAGGCTATAATGCGAACCAAGGCAATAATAGCAAGATGCAGGATAACGAGCAAGAATTAGATGCAGATTACGAAAATGATCAAGACTCGGCGGACCCGAGTGTAGAATATCAAGCTAGATATCCTTGCGACACATGCGGCAAACAGTTCGTGGGAATGCTTGCGTTACAAAACCACCAGTGTATCAATCAGGTCCCTTCCCAACCGCAAACCTTCGACTGCGAAATCTGTCATAAGAGTTACACATCGATCGCGGCGCTCAAGAGCCACCGAGGCTGGCATCTGCGTTCGCCGGACGGCAAAGCGGCCGCCAACAACACCGGGCTTTGGATGCCTCAGCACAAAGTGACCAGCAAGGTCAGCAAACACGAGGTCGTCGATCCGGTCCAACTCGCCCGCGTGTCGCACTCgtcgcccgccgccgccgtcgccgccaAGCGAAGGTTACCACCGGAGGTCGAAGTGACGGTCGTAAACCCAAACAAAAAGTTGCGGTCGGATGACTCCGTAGAAATGGATCAGAACATGTCCGGCGGCGTCGAAGACAGATACTGCACGATATGCGACAAAGAGTTCACGAAGCGCGCCGCGTACCTTCGCCACATGGATGAGGTGCATCAACCCAACTCGGTGTTCTGTCCCGTCTGTGAGAAGAGTTTCACGCGGAAGTCGACTTTGCTGGTTCATATGAAGAAGCATTACGAAGGCGGCGAGGGTAGCTCGTCCGGGGCGGTTCAAGAAGAGGAGGAGAATCACGCGTGTGATTTATGCGGAGCTCAGTTTGACAGCGAGAAGGCGTTGAAGGCCCACCTGACGAGGCACCACGGGGAAGATTCGGGGGAGTCGGATGACGACGGTAGCGTGCCGGTGTCGCAGCCGGGCGAGTTCACTTGCGGCCAGTGCGGCGACGGCGTGGCCACCCCGCGAGACTTGATCGCGCACCGCACGATGCACGCGACGCCCACCAAATTCGTCTGCAACATCTGCAAAGTCTACTTCGCCCGAGCCCTCGACCTGTCTTCTCACACTCGTGCGAGGCACGCGGACAACGAGAAGGTGTACTTCCCCTGTGCCATGTGTGACCGTTTCTACATGAACAAGAAGAGTCTGCAGCGACACATCGAGATGGCTCATTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVSVQISENDDLPTNVCRKCVDNVNNWHIFKTVCERTQNKLELLIKKDGSQLEEIKIKSEPADEAYDDGVVIDGSYPDNENAAGSSKVQPEGPPILASLGLTPRSDKGIESDKEEEEEDDEEEMREPPQKYTKVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTSHSFDRYTNKVVNKKQPSHMQPKLRPNPFNPKARLMPNPISHKMQLLKQPMPSKVAPHKVITPPKPILIKTPKGAQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIVNSGPESPETLISEPEIASFQVETILSEPDGFDHQGDGDEEMDGDMTNNQGQNYDTVDMESDNEIEIAREQENEGEVEGEDDDNNAEDGEEHNQNDEEINHYEQNSENEKDPAEENEPEHSEEHIGIDESDLQAAEENQEKEDGIEDGDNDHEMNHDEIRDEDDDDLPPMEIAPEVEINEDMQTNSYNSEVNEEEEEELEESADLNDTAEEGVKELDPDKLYVTKTQRDFILKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLHCVHCRARFKDKSLIKKHIRNGECTVIISCDLCSEKFVNMQDFNDHALAVHAGSFDSDSQNKCVDGRPTDCSLCGKKNSSYPNLIKHLKMVHNEDKPHYCQHCDGKFEQATDLNKHIYTEHSDRTLGMQSTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCTNSYSTPQKLSEHVQQAHPGAGSFPTMDSEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIIGKPIKSFTAVQPGFVAFKPNCNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLINDRNDSEENTMQASTEDDEYNADESGAILSTPQFNSFNFTNFANNVQQSTPQGQDLLPFSCELCFKRFPLRTSLWKHKRAKHGISGSDNQQPSEAGSRSSCTICKITFSDKKSYYRHRKNVHKSSSQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGNNSKMQDNEQELDADYENDQDSADPSVEYQARYPCDTCGKQFVGMLALQNHQCINQVPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDPVQLARVSHSSPAAAVAAKRRLPPEVEVTVVNPNKKLRSDDSVEMDQNMSGGVEDRYCTICDKEFTKRAAYLRHMDEVHQPNSVFCPVCEKSFTRKSTLLVHMKKHYEGGEGSSSGAVQEEEENHACDLCGAQFDSEKALKAHLTRHHGEDSGESDDDGSVPVSQPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFVCNICKVYFARALDLSSHTRARHADNEKVYFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00035015;
90% Identity: -
80% Identity: -