Basic Information

Insect: Ostrinia furnacalis
Gene Symbol: LRRFIP2
Assembly: GCA_004193835.1
Location: NW:1272415-1296981[-]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.34 5.1e+03 -3.8 0.1 46 94 46 94 31 95 0.70

2 8 4.7e-52 7.2e-48 163.2 7.5 1 137 132 265 132 267 0.93

3 8 2.2e-12 3.4e-08 32.9 0.5 106 137 284 315 283 317 0.95

4 8 2.2e-12 3.4e-08 32.9 0.5 106 137 334 365 333 367 0.95

5 8 2.2e-12 3.4e-08 32.9 0.5 106 137 384 415 383 417 0.95

6 8 2.2e-12 3.4e-08 32.9 0.5 106 137 434 465 433 467 0.95

7 8 5.3e-37 8e-33 113.7 2.6 106 265 484 642 483 664 0.90

8 8 1 1.5e+04 -7.9 17.6 1 47 665 710 665 739 0.70

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.34	5.1e+03	-3.8	0.1	46	94	46	94	31	95	0.70
2	8	4.7e-52	7.2e-48	163.2	7.5	1	137	132	265	132	267	0.93
3	8	2.2e-12	3.4e-08	32.9	0.5	106	137	284	315	283	317	0.95
4	8	2.2e-12	3.4e-08	32.9	0.5	106	137	334	365	333	367	0.95
5	8	2.2e-12	3.4e-08	32.9	0.5	106	137	384	415	383	417	0.95
6	8	2.2e-12	3.4e-08	32.9	0.5	106	137	434	465	433	467	0.95
7	8	5.3e-37	8e-33	113.7	2.6	106	265	484	642	483	664	0.90
8	8	1	1.5e+04	-7.9	17.6	1	47	665	710	665	739	0.70

Sequence Information

Coding Sequence: ATGGGCAGGATTACCAAGAAGATGGCGACACCTACTAGCAGTGATGTTGAGAGCGGTGGTGATGCTTTTACTGACGGCGATTTCGATGATAGTGATGAAGATATAACAGTTGTGGAGAGGTGTGAAGATTCGGGAAAATCAAGAATTCCTGTAAACGACACTGTAAATACAGACGTCAAAAATAATCTTCACAATGGTGCATCTCCTATTTCTTCAAAGGCACAAACTAATGGCCTGGAACATCAGTCAAAGGTTAACGGACTAAAAAACGGTGATAAGGAATTGCCTAGTGCCGTGGAGTGTCGTAGTAGTGATGTAGTTGAATTTCGAAGAGACTCCCATGGTGATCAAAATCCATCTATAGTTGGAATTATTGGAGATCAACATAGTCATGCAGAACAGCGGCTCGCAGCGCGGCGAGCGGCGCGGGCGGAGGCGCGCGAGATCCGCATGCGAGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCCTACGACATGTACGCGGGGAAGCTGCCCGAGACGGTGGGCAGGCGGGGGGGCTCGCGACTGGCGGGACTCAGCCCTGGAGGACTACACTCGCCGAGGAGGAGCTCGGAGGACTCGGCCGATGACGTCTTCAACATTAAGGACCTCAGGCACGAGCTGAAAGAAGTGGAAGAGAAATTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTGGGCTACCAGCTCGAGCTGCTCAAGGACCGGATAGAGGAGCTGCAGGAGGAGCACGCGCAGCTGTCGGTATGTTCTGTTCCAGTGTTATGTAGACAAGTCCCGCGAGGCGACGATCCTGACGCGCAGCTGGACAACGACAAGGCGGCGCTGGGCTACCAGCTCGAGCTGCTCAAGGACCGGATAGAGGAGCTGCAGGAGGAGCACGCGCAGCTGTCGGTATGTTCTGTTCCAGTGTTATGTAGACAAGTCCCGCGAGGCGACGATCCTGACGCGCAGCTGGACAACGACAAGGCGGCGCTGGGCTACCAGCTCGAGCTGCTCAAGGACCGGATAGAGGAGCTGCAGGAGGAGCACGCGCAGCTGTCGGTATGTTCTGTTCCAGTGTTATGTAGACAAGTCCCGCGAGGCGACGATCCTGACGCGCAGCTGGACAACGACAAGGCGGCGCTGGGCTACCAGCTCGAGCTGCTCAAGGACCGGATAGAGGAGCTGCAGGAGGAGCACGCGCAGCTGTCGGTATGTTCTGTTCCAGTGTTATGTAGACAAGTCCCGCGAGGCGACGATCCTGACGCGCAGCTGGACAACGACAAGGCGGCGCTGGGCTACCAGCTCGAGCTGCTCAAGGACCGGATAGAGGAGCTGCAGGAGGAGCACGCGCAGCTGTCGGTATGTTCTGTTCCAGTGTTATGTAGACAAGTCCCGCGAGGCGACGATCCTGACGCGCAGCTGGACAACGACAAGGCGGCGCTGGGCTACCAGCTCGAGCTGCTCAAGGACCGGATAGAGGAGCTGCAGGAGGAGCACGCGCAGCTGTCGCGTGAACACAAAGAAAAGTGCTCAGCCCACGAGCGGTTACGGCGCGAGCACGCGTCCCTCGAGCGGGAAGTGACGTGCGCGCGGGACGCGGTGCGCGCGCgggacgccgccgccgccgccgccggcttcGCCTTCGTGGAGGcgggcgccgccgccgacgTGCCCGGCTTCGGCGCCGTGCCGCCGCTGGCGCTCGTCTCGCATCAAGCGGACCAGATGCTAGGAGACGCTTCTGAGGGGACGCTGGACGTGCGGTTGCAGAAGCTCCTCAGCTCGAAGACGGCGCTGGAGTCGGAGGTGCGCAAGCTGAAGCTCACGCTCAACGAGGAGCGCGCGGCGCGCCACAACGGCGTCGCGCACCACCACGACCACGAGTACGAGACTGAGCTGGAGACCCTCCGACGAGGCGTGACGGAGGCGAAggcccgcgccgcgcgcgccgagGCCGAGGCCGCGCTgcaggccgccgccgccgcccgcctcgAGGCCCAGCTGGcccggctgcgcgcgcgccaggACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGCGCCGCAAACTGCAGCGCGAGGCGCGGGAAGCCCTCAACCGAGTCGAAGAGCTGGAGACGGAGAACAGCCACCTCACCAAGcggctggacaagctgaagaaCGCCAAGTCGGCTCTCCTCAAGGAGCTGTGA
Protein Sequence: MGRITKKMATPTSSDVESGGDAFTDGDFDDSDEDITVVERCEDSGKSRIPVNDTVNTDVKNNLHNGASPISSKAQTNGLEHQSKVNGLKNGDKELPSAVECRSSDVVEFRRDSHGDQNPSIVGIIGDQHSHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKLPETVGRRGGSRLAGLSPGGLHSPRRSSEDSADDVFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEHAQLSVCSVPVLCRQVPRGDDPDAQLDNDKAALGYQLELLKDRIEELQEEHAQLSVCSVPVLCRQVPRGDDPDAQLDNDKAALGYQLELLKDRIEELQEEHAQLSVCSVPVLCRQVPRGDDPDAQLDNDKAALGYQLELLKDRIEELQEEHAQLSVCSVPVLCRQVPRGDDPDAQLDNDKAALGYQLELLKDRIEELQEEHAQLSVCSVPVLCRQVPRGDDPDAQLDNDKAALGYQLELLKDRIEELQEEHAQLSREHKEKCSAHERLRREHASLEREVTCARDAVRARDAAAAAAGFAFVEAGAAADVPGFGAVPPLALVSHQADQMLGDASEGTLDVRLQKLLSSKTALESEVRKLKLTLNEERAARHNGVAHHHDHEYETELETLRRGVTEAKARAARAEAEAALQAAAAARLEAQLARLRARQDHQDEHEELLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -